RNA–Protein interactions for RNA: ENST00000479008.1

SMARCAL1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-211ENST00000479008 SHANK3Q9BYB0 1731 aa18.03■□□□□ 0.48
SMARCAL1-211ENST00000479008 APAF1O14727 1248 aa18.03■□□□□ 0.48
SMARCAL1-211ENST00000479008 QTRT2Q9H974 415 aaKnown RBP18.03■□□□□ 0.48
SMARCAL1-211ENST00000479008 OVOS2A0A0G2JMS6 1433 aa18.03■□□□□ 0.48
SMARCAL1-211ENST00000479008 VIRMAQ69YN4 1812 aaKnown RBP18.02■□□□□ 0.48
SMARCAL1-211ENST00000479008 GJD4Q96KN9 370 aaPredicted RBP18.02■□□□□ 0.48
SMARCAL1-211ENST00000479008 PHF23Q9BUL5 403 aaPredicted RBP18.02■□□□□ 0.48
SMARCAL1-211ENST00000479008 MTHFSDQ2M296 383 aaKnown RBP18.01■□□□□ 0.47
SMARCAL1-211ENST00000479008 PLEKHO1Q53GL0 409 aaPredicted RBP18.01■□□□□ 0.47
SMARCAL1-211ENST00000479008 BARGINQ6ZT62 677 aa18.01■□□□□ 0.47
SMARCAL1-211ENST00000479008 YTHDC1Q96MU7 727 aaKnown RBP18.01■□□□□ 0.47
SMARCAL1-211ENST00000479008 RRP7AQ9Y3A4 280 aaKnown RBP18.01■□□□□ 0.47
SMARCAL1-211ENST00000479008 PLEKHG2Q9H7P9 1386 aa18.01■□□□□ 0.47
SMARCAL1-211ENST00000479008 LRRC37A3O60309 1634 aa18.01■□□□□ 0.47
SMARCAL1-211ENST00000479008 HNRNPUQ00839 825 aaKnown RBP eCLIP18■□□□□ 0.47
SMARCAL1-211ENST00000479008 FAM98CQ17RN3 349 aaKnown RBP18■□□□□ 0.47
SMARCAL1-211ENST00000479008 GAS2L2Q8NHY3 880 aa18■□□□□ 0.47
SMARCAL1-211ENST00000479008 CDCA7Q9BWT1 371 aaPredicted RBP18■□□□□ 0.47
SMARCAL1-211ENST00000479008 THSD7AQ9UPZ6 1657 aa17.99■□□□□ 0.47
SMARCAL1-211ENST00000479008 TMPOP42166 694 aaKnown RBP17.99■□□□□ 0.47
SMARCAL1-211ENST00000479008 NEUROD2Q15784 382 aa17.99■□□□□ 0.47
SMARCAL1-211ENST00000479008 NFE2L2Q16236 605 aa17.99■□□□□ 0.47
SMARCAL1-211ENST00000479008 AMOTQ4VCS5 1084 aa17.99■□□□□ 0.47
SMARCAL1-211ENST00000479008 SPG7Q9UQ90 795 aa17.99■□□□□ 0.47
SMARCAL1-211ENST00000479008 ZNF530Q6P9A1 599 aaPredicted RBP17.98■□□□□ 0.47
SMARCAL1-211ENST00000479008 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.98■□□□□ 0.47
SMARCAL1-211ENST00000479008 RGS17Q9UGC6 210 aaPredicted RBP17.98■□□□□ 0.47
SMARCAL1-211ENST00000479008 SALL2Q9Y467 1007 aaPredicted RBP17.98■□□□□ 0.47
SMARCAL1-211ENST00000479008 ZCRB1Q8TBF4 217 aaKnown RBP17.97■□□□□ 0.47
SMARCAL1-211ENST00000479008 TNS2Q63HR2 1409 aa17.97■□□□□ 0.47
SMARCAL1-211ENST00000479008 A0A0G2JS52 829 aa17.96■□□□□ 0.47
SMARCAL1-211ENST00000479008 RIPK4P57078 832 aa17.96■□□□□ 0.47
SMARCAL1-211ENST00000479008 MYT1Q01538 1121 aa17.96■□□□□ 0.47
SMARCAL1-211ENST00000479008 RBM6P78332 1123 aaKnown RBP17.95■□□□□ 0.46
SMARCAL1-211ENST00000479008 PCDH11XQ9BZA7 1347 aa17.95■□□□□ 0.46
SMARCAL1-211ENST00000479008 PCDH11YQ9BZA8 1340 aa17.95■□□□□ 0.46
SMARCAL1-211ENST00000479008 SCN11AQ9UI33 1791 aa17.94■□□□□ 0.46
SMARCAL1-211ENST00000479008 MAP3K5Q99683 1374 aa17.94■□□□□ 0.46
SMARCAL1-211ENST00000479008 BRWD3Q6RI45 1802 aa17.94■□□□□ 0.46
SMARCAL1-211ENST00000479008 EXOC5O00471 708 aa17.94■□□□□ 0.46
SMARCAL1-211ENST00000479008 DDB1Q16531 1140 aa17.94■□□□□ 0.46
SMARCAL1-211ENST00000479008 C1orf141Q5JVX7 400 aa17.94■□□□□ 0.46
SMARCAL1-211ENST00000479008 CYP27B1O15528 508 aa17.93■□□□□ 0.46
SMARCAL1-211ENST00000479008 AKAP4Q5JQC9 854 aa17.93■□□□□ 0.46
SMARCAL1-211ENST00000479008 POTEAQ6S8J7 498 aa17.93■□□□□ 0.46
SMARCAL1-211ENST00000479008 IFNL2Q8IZJ0 200 aa17.93■□□□□ 0.46
SMARCAL1-211ENST00000479008 GNAT3A8MTJ3 354 aa17.92■□□□□ 0.46
SMARCAL1-211ENST00000479008 PHKG2P15735 406 aa17.92■□□□□ 0.46
SMARCAL1-211ENST00000479008 LMOD3Q0VAK6 560 aa17.92■□□□□ 0.46
SMARCAL1-211ENST00000479008 NGEFQ8N5V2 710 aa17.92■□□□□ 0.46
SMARCAL1-211ENST00000479008 DDX54Q8TDD1 881 aaKnown RBP17.92■□□□□ 0.46
SMARCAL1-211ENST00000479008 TRIM35Q9UPQ4 493 aa17.92■□□□□ 0.46
SMARCAL1-211ENST00000479008 ADAMTS7Q9UKP4 1686 aa17.91■□□□□ 0.46
SMARCAL1-211ENST00000479008 ONECUT3O60422 494 aaPredicted RBP17.91■□□□□ 0.46
SMARCAL1-211ENST00000479008 RXRBP28702 533 aa17.91■□□□□ 0.46
SMARCAL1-211ENST00000479008 NCBP3Q53F19 620 aaKnown RBP17.91■□□□□ 0.46
SMARCAL1-211ENST00000479008 CCDC27Q2M243 656 aa17.9■□□□□ 0.46
SMARCAL1-211ENST00000479008 SEPT12Q8IYM1 358 aa17.9■□□□□ 0.46
SMARCAL1-211ENST00000479008 RTF1Q92541 710 aaKnown RBP17.9■□□□□ 0.46
SMARCAL1-211ENST00000479008 KAT6BQ8WYB5 2073 aa17.9■□□□□ 0.46
SMARCAL1-211ENST00000479008 DCTN1Q14203 1278 aa17.89■□□□□ 0.45
SMARCAL1-211ENST00000479008 MPRIPQ6WCQ1 1025 aa17.89■□□□□ 0.45
SMARCAL1-211ENST00000479008 MCM10Q7L590 875 aa17.89■□□□□ 0.45
SMARCAL1-211ENST00000479008 ZBED9Q6R2W3 1325 aa17.89■□□□□ 0.45
SMARCAL1-211ENST00000479008 TOGARAM1Q9Y4F4 1720 aa17.89■□□□□ 0.45
SMARCAL1-211ENST00000479008 HTATSF1O43719 755 aaKnown RBP17.88■□□□□ 0.45
SMARCAL1-211ENST00000479008 HSP90AB1P08238 724 aaKnown RBP17.88■□□□□ 0.45
SMARCAL1-211ENST00000479008 WWC1Q8IX03 1113 aa17.88■□□□□ 0.45
SMARCAL1-211ENST00000479008 THUMPD2Q9BTF0 503 aaKnown RBP17.88■□□□□ 0.45
SMARCAL1-211ENST00000479008 DOT1LQ8TEK3 1739 aa17.88■□□□□ 0.45
SMARCAL1-211ENST00000479008 KDM6AO15550 1401 aaPredicted RBP17.88■□□□□ 0.45
SMARCAL1-211ENST00000479008 ITGB4P16144 1822 aa17.87■□□□□ 0.45
SMARCAL1-211ENST00000479008 PDE3BQ13370 1112 aa17.87■□□□□ 0.45
SMARCAL1-211ENST00000479008 SIPA1L3O60292 1781 aaPredicted RBP17.86■□□□□ 0.45
SMARCAL1-211ENST00000479008 RNMTO43148 476 aaKnown RBP17.86■□□□□ 0.45
SMARCAL1-211ENST00000479008 NKX1-1Q15270 411 aaPredicted RBP17.86■□□□□ 0.45
SMARCAL1-211ENST00000479008 MARCH10Q8NA82 808 aaPredicted RBP17.86■□□□□ 0.45
SMARCAL1-211ENST00000479008 IL17REQ8NFR9 667 aa17.86■□□□□ 0.45
SMARCAL1-211ENST00000479008 LGR6Q9HBX8 967 aa17.86■□□□□ 0.45
SMARCAL1-211ENST00000479008 ZNF521Q96K83 1311 aa17.86■□□□□ 0.45
SMARCAL1-211ENST00000479008 RGS12O14924 1447 aa17.86■□□□□ 0.45
SMARCAL1-211ENST00000479008 DCAF5Q96JK2 942 aa17.85■□□□□ 0.45
SMARCAL1-211ENST00000479008 CEMIPQ8WUJ3 1361 aa17.84■□□□□ 0.45
SMARCAL1-211ENST00000479008 WDR63Q8IWG1 891 aa17.83■□□□□ 0.44
SMARCAL1-211ENST00000479008 SBF2Q86WG5 1849 aa17.83■□□□□ 0.44
SMARCAL1-211ENST00000479008 MRC1P22897 1456 aa17.82■□□□□ 0.44
SMARCAL1-211ENST00000479008 CALD1Q05682 793 aaKnown RBP17.82■□□□□ 0.44
SMARCAL1-211ENST00000479008 TEFQ10587 303 aa17.82■□□□□ 0.44
SMARCAL1-211ENST00000479008 KRT27Q7Z3Y8 459 aa17.82■□□□□ 0.44
SMARCAL1-211ENST00000479008 GOLGA2Q08379 1002 aa17.81■□□□□ 0.44
SMARCAL1-211ENST00000479008 FAM182BQ5T319 152 aa17.8■□□□□ 0.44
SMARCAL1-211ENST00000479008 LAS1LQ9Y4W2 734 aaKnown RBP17.8■□□□□ 0.44
SMARCAL1-211ENST00000479008 KDM3BQ7LBC6 1761 aa17.8■□□□□ 0.44
SMARCAL1-211ENST00000479008 IL16Q14005 1332 aa17.79■□□□□ 0.44
SMARCAL1-211ENST00000479008 ERVV-2B6SEH9 535 aa17.79■□□□□ 0.44
SMARCAL1-211ENST00000479008 CABP4P57796 275 aa17.79■□□□□ 0.44
SMARCAL1-211ENST00000479008 CDCA7LQ96GN5 454 aa17.79■□□□□ 0.44
SMARCAL1-211ENST00000479008 SLC52A2Q9HAB3 445 aa17.79■□□□□ 0.44
SMARCAL1-211ENST00000479008 NHSQ6T4R5 1651 aa17.78■□□□□ 0.44
SMARCAL1-211ENST00000479008 TAF7Q15545 349 aaPredicted RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms