RNA–Protein interactions for RNA: ENST00000478958.5

LRRFIP1-211, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best)

Gene LRRFIP1, Length 2,869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-211ENST00000478958 SOX12O15370 315 aa13.51□□□□□ -0.25
LRRFIP1-211ENST00000478958 ZGPATQ8N5A5 531 aaKnown RBP13.51□□□□□ -0.25
LRRFIP1-211ENST00000478958 IFT57Q9NWB7 429 aa13.51□□□□□ -0.25
LRRFIP1-211ENST00000478958 LRRC7Q96NW7 1537 aa13.51□□□□□ -0.25
LRRFIP1-211ENST00000478958 SASS6Q6UVJ0 657 aa13.51□□□□□ -0.25
LRRFIP1-211ENST00000478958 ARHGAP45Q92619 1136 aa13.51□□□□□ -0.25
LRRFIP1-211ENST00000478958 ZNF428Q96B54 188 aa13.51□□□□□ -0.25
LRRFIP1-211ENST00000478958 ARHGEF28Q8N1W1 1705 aaKnown RBP13.51□□□□□ -0.25
LRRFIP1-211ENST00000478958 POGZQ7Z3K3 1410 aa13.5□□□□□ -0.25
LRRFIP1-211ENST00000478958 FRMPD1Q5SYB0 1578 aa13.5□□□□□ -0.25
LRRFIP1-211ENST00000478958 ABCC4O15439 1325 aa13.5□□□□□ -0.25
LRRFIP1-211ENST00000478958 CSPP1Q1MSJ5 1256 aa13.5□□□□□ -0.25
LRRFIP1-211ENST00000478958 NOL8Q76FK4 1167 aaKnown RBP13.5□□□□□ -0.25
LRRFIP1-211ENST00000478958 RGS22Q8NE09 1264 aa13.5□□□□□ -0.25
LRRFIP1-211ENST00000478958 API5Q9BZZ5 524 aaKnown RBP13.5□□□□□ -0.25
LRRFIP1-211ENST00000478958 SLC52A1Q9NWF4 448 aa13.5□□□□□ -0.25
LRRFIP1-211ENST00000478958 YTHDC2Q9H6S0 1430 aaKnown RBP13.5□□□□□ -0.25
LRRFIP1-211ENST00000478958 PRPF40AO75400 957 aaKnown RBP13.5□□□□□ -0.25
LRRFIP1-211ENST00000478958 KLHL40Q2TBA0 621 aa13.5□□□□□ -0.25
LRRFIP1-211ENST00000478958 CFAP44Q96MT7 982 aa13.5□□□□□ -0.25
LRRFIP1-211ENST00000478958 RBM27Q9P2N5 1060 aaKnown RBP13.5□□□□□ -0.25
LRRFIP1-211ENST00000478958 NEXMIFQ5QGS0 1516 aa13.49□□□□□ -0.25
LRRFIP1-211ENST00000478958 RABEP1Q15276 862 aa13.49□□□□□ -0.25
LRRFIP1-211ENST00000478958 TTC22Q5TAA0 569 aa13.49□□□□□ -0.25
LRRFIP1-211ENST00000478958 FAM135BQ49AJ0 1406 aa13.49□□□□□ -0.25
LRRFIP1-211ENST00000478958 ZNF500O60304 480 aaPredicted RBP13.49□□□□□ -0.25
LRRFIP1-211ENST00000478958 SDSP20132 328 aa13.49□□□□□ -0.25
LRRFIP1-211ENST00000478958 IL13P35225 146 aa13.49□□□□□ -0.25
LRRFIP1-211ENST00000478958 BRPF1P55201 1214 aaPredicted RBP13.49□□□□□ -0.25
LRRFIP1-211ENST00000478958 FOXD4L6Q3SYB3 417 aaPredicted RBP13.48□□□□□ -0.25
LRRFIP1-211ENST00000478958 TSHZ3Q63HK5 1081 aa13.48□□□□□ -0.25
LRRFIP1-211ENST00000478958 FOXD4L3Q6VB84 417 aaPredicted RBP13.48□□□□□ -0.25
LRRFIP1-211ENST00000478958 AEBP1Q8IUX7 1158 aa13.48□□□□□ -0.25
LRRFIP1-211ENST00000478958 USP26Q9BXU7 913 aa13.48□□□□□ -0.25
LRRFIP1-211ENST00000478958 MED14O60244 1454 aa13.48□□□□□ -0.25
LRRFIP1-211ENST00000478958 TPRNQ4KMQ1 711 aa13.48□□□□□ -0.25
LRRFIP1-211ENST00000478958 SLC4A10Q6U841 1118 aa13.48□□□□□ -0.25
LRRFIP1-211ENST00000478958 MCM10Q7L590 875 aa13.48□□□□□ -0.25
LRRFIP1-211ENST00000478958 DCTPP1Q9H773 170 aa13.48□□□□□ -0.25
LRRFIP1-211ENST00000478958 MIS18AQ9NYP9 233 aa13.48□□□□□ -0.25
LRRFIP1-211ENST00000478958 AK9Q5TCS8 1911 aa13.48□□□□□ -0.25
LRRFIP1-211ENST00000478958 NUTM2FA1L443 756 aa13.47□□□□□ -0.25
LRRFIP1-211ENST00000478958 ZBTB7CA1YPR0 619 aa13.47□□□□□ -0.25
LRRFIP1-211ENST00000478958 PTMSP20962 102 aa13.47□□□□□ -0.25
LRRFIP1-211ENST00000478958 PTPRMP28827 1452 aa13.47□□□□□ -0.25
LRRFIP1-211ENST00000478958 ZNF853P0CG23 659 aa13.47□□□□□ -0.25
LRRFIP1-211ENST00000478958 INTS3Q68E01 1043 aaKnown RBP13.47□□□□□ -0.25
LRRFIP1-211ENST00000478958 MEIS3Q99687 375 aa13.47□□□□□ -0.25
LRRFIP1-211ENST00000478958 ZSCAN23Q3MJ62 389 aa13.46□□□□□ -0.25
LRRFIP1-211ENST00000478958 PTCH1Q13635 1447 aa13.46□□□□□ -0.25
LRRFIP1-211ENST00000478958 CFAP74Q9C0B2 1584 aa13.46□□□□□ -0.25
LRRFIP1-211ENST00000478958 PRIM1P49642 420 aaKnown RBP13.46□□□□□ -0.25
LRRFIP1-211ENST00000478958 IRX5P78411 483 aaPredicted RBP13.46□□□□□ -0.25
LRRFIP1-211ENST00000478958 NUCB2P80303 420 aa13.46□□□□□ -0.26
LRRFIP1-211ENST00000478958 ZNF771Q7L3S4 317 aaPredicted RBP13.46□□□□□ -0.26
LRRFIP1-211ENST00000478958 LMBRD1Q9NUN5 540 aa13.46□□□□□ -0.26
LRRFIP1-211ENST00000478958 SIGLEC1Q9BZZ2 1709 aa13.45□□□□□ -0.26
LRRFIP1-211ENST00000478958 SULT6B1Q6IMI4 303 aa13.45□□□□□ -0.26
LRRFIP1-211ENST00000478958 COG3Q96JB2 828 aa13.45□□□□□ -0.26
LRRFIP1-211ENST00000478958 RBSNQ9H1K0 784 aa13.45□□□□□ -0.26
LRRFIP1-211ENST00000478958 NOL7Q9UMY1 257 aaKnown RBP13.45□□□□□ -0.26
LRRFIP1-211ENST00000478958 MLH3Q9UHC1 1453 aa13.45□□□□□ -0.26
LRRFIP1-211ENST00000478958 ST18O60284 1047 aa13.45□□□□□ -0.26
LRRFIP1-211ENST00000478958 HS1BP3Q53T59 392 aa13.45□□□□□ -0.26
LRRFIP1-211ENST00000478958 CASC1Q6TDU7 716 aa13.45□□□□□ -0.26
LRRFIP1-211ENST00000478958 TXNDC2Q86VQ3 553 aa13.45□□□□□ -0.26
LRRFIP1-211ENST00000478958 RNF214Q8ND24 703 aa13.45□□□□□ -0.26
LRRFIP1-211ENST00000478958 DNAJC2Q99543 621 aaKnown RBP13.45□□□□□ -0.26
LRRFIP1-211ENST00000478958 ZFYVE9O95405 1425 aa13.44□□□□□ -0.26
LRRFIP1-211ENST00000478958 PIK3R4Q99570 1358 aa13.44□□□□□ -0.26
LRRFIP1-211ENST00000478958 F6X3S4 739 aa13.44□□□□□ -0.26
LRRFIP1-211ENST00000478958 MLECQ14165 292 aa13.44□□□□□ -0.26
LRRFIP1-211ENST00000478958 CEP85Q6P2H3 762 aa13.44□□□□□ -0.26
LRRFIP1-211ENST00000478958 CERS3Q8IU89 383 aa13.44□□□□□ -0.26
LRRFIP1-211ENST00000478958 HECW2Q9P2P5 1572 aa13.44□□□□□ -0.26
LRRFIP1-211ENST00000478958 IGSF3O75054 1194 aa13.44□□□□□ -0.26
LRRFIP1-211ENST00000478958 LMOD3Q0VAK6 560 aa13.44□□□□□ -0.26
LRRFIP1-211ENST00000478958 ANKRD44Q8N8A2 993 aa13.44□□□□□ -0.26
LRRFIP1-211ENST00000478958 KCNJ4P48050 445 aa13.43□□□□□ -0.26
LRRFIP1-211ENST00000478958 ATP2B3Q16720 1220 aa13.43□□□□□ -0.26
LRRFIP1-211ENST00000478958 SYCE3A1L190 88 aa13.43□□□□□ -0.26
LRRFIP1-211ENST00000478958 SLC4A2P04920 1241 aa13.43□□□□□ -0.26
LRRFIP1-211ENST00000478958 NEK4P51957 841 aa13.43□□□□□ -0.26
LRRFIP1-211ENST00000478958 NSFL1CQ9UNZ2 370 aaKnown RBP13.43□□□□□ -0.26
LRRFIP1-211ENST00000478958 GPT2Q8TD30 523 aa13.42□□□□□ -0.26
LRRFIP1-211ENST00000478958 RNF216Q9NWF9 866 aaPredicted RBP13.42□□□□□ -0.26
LRRFIP1-211ENST00000478958 RIMS2Q9UQ26 1411 aa13.42□□□□□ -0.26
LRRFIP1-211ENST00000478958 EXOC6BQ9Y2D4 811 aa13.42□□□□□ -0.26
LRRFIP1-211ENST00000478958 MSH6P52701 1360 aa13.42□□□□□ -0.26
LRRFIP1-211ENST00000478958 YEATS2Q9ULM3 1422 aa13.42□□□□□ -0.26
LRRFIP1-211ENST00000478958 MPNDQ8N594 471 aa13.42□□□□□ -0.26
LRRFIP1-211ENST00000478958 ZDHHC9Q9Y397 364 aa13.42□□□□□ -0.26
LRRFIP1-211ENST00000478958 NECTIN2Q92692 538 aa13.41□□□□□ -0.26
LRRFIP1-211ENST00000478958 PIK3C2BO00750 1634 aa13.41□□□□□ -0.26
LRRFIP1-211ENST00000478958 ARHGEF40Q8TER5 1519 aa13.4□□□□□ -0.26
LRRFIP1-211ENST00000478958 SPDYE4A6NLX3 237 aa13.4□□□□□ -0.26
LRRFIP1-211ENST00000478958 REC8O95072 547 aa13.4□□□□□ -0.26
LRRFIP1-211ENST00000478958 CLEC17AQ6ZS10 378 aa13.4□□□□□ -0.26
LRRFIP1-211ENST00000478958 RPAP2Q8IXW5 612 aaPredicted RBP13.4□□□□□ -0.26
LRRFIP1-211ENST00000478958 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms