RNA–Protein interactions for RNA: ENST00000478914.1

XRCC6-208, Transcript of X-ray repair cross complementing 6, humanhuman

TSL 2

Gene XRCC6, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6-208ENST00000478914 MEGF6O75095 1541 aa12.06□□□□□ -0.48
XRCC6-208ENST00000478914 PPM1GO15355 546 aaPredicted RBP12.05□□□□□ -0.48
XRCC6-208ENST00000478914 HSPA5P11021 654 aaKnown RBP12.05□□□□□ -0.48
XRCC6-208ENST00000478914 TATP17735 454 aaPredicted RBP12.05□□□□□ -0.48
XRCC6-208ENST00000478914 PROM2Q8N271 834 aa12.05□□□□□ -0.48
XRCC6-208ENST00000478914 USHBP1Q8N6Y0 703 aa12.05□□□□□ -0.48
XRCC6-208ENST00000478914 SYTL4Q96C24 671 aaPredicted RBP12.05□□□□□ -0.48
XRCC6-208ENST00000478914 ANO8Q9HCE9 1232 aaPredicted RBP12.05□□□□□ -0.48
XRCC6-208ENST00000478914 SLC15A2Q16348 729 aa12.04□□□□□ -0.48
XRCC6-208ENST00000478914 HSP90AB2PQ58FF8 381 aa12.04□□□□□ -0.48
XRCC6-208ENST00000478914 NBPF6Q5VWK0 638 aa12.04□□□□□ -0.48
XRCC6-208ENST00000478914 NBPF4Q96M43 638 aa12.04□□□□□ -0.48
XRCC6-208ENST00000478914 LY75O60449 1722 aa12.03□□□□□ -0.48
XRCC6-208ENST00000478914 EMILIN1Q9Y6C2 1016 aa12.03□□□□□ -0.48
XRCC6-208ENST00000478914 PAPPAQ13219 1627 aa12.03□□□□□ -0.48
XRCC6-208ENST00000478914 QSER1Q2KHR3 1735 aa12.03□□□□□ -0.48
XRCC6-208ENST00000478914 PCDH11XQ9BZA7 1347 aa12.02□□□□□ -0.49
XRCC6-208ENST00000478914 PCDH11YQ9BZA8 1340 aa12.02□□□□□ -0.49
XRCC6-208ENST00000478914 PKD1L3Q7Z443 1732 aa12.02□□□□□ -0.49
XRCC6-208ENST00000478914 ITGB4P16144 1822 aa12.02□□□□□ -0.49
XRCC6-208ENST00000478914 DCAF8L1A6NGE4 600 aa12.01□□□□□ -0.49
XRCC6-208ENST00000478914 PRIM1P49642 420 aaKnown RBP12.01□□□□□ -0.49
XRCC6-208ENST00000478914 TUBGCP6Q96RT7 1819 aa12□□□□□ -0.49
XRCC6-208ENST00000478914 ZBTB7AO95365 584 aa12□□□□□ -0.49
XRCC6-208ENST00000478914 SLC27A3Q5K4L6 730 aa12□□□□□ -0.49
XRCC6-208ENST00000478914 TNNT2P45379 298 aaPredicted RBP11.99□□□□□ -0.49
XRCC6-208ENST00000478914 PANK3Q9H999 370 aa11.99□□□□□ -0.49
XRCC6-208ENST00000478914 WASHC2AQ641Q2 1341 aa11.99□□□□□ -0.49
XRCC6-208ENST00000478914 NSD2O96028 1365 aa11.99□□□□□ -0.49
XRCC6-208ENST00000478914 YY1P25490 414 aa11.98□□□□□ -0.49
XRCC6-208ENST00000478914 PDGFDQ9GZP0 370 aaPredicted RBP11.98□□□□□ -0.49
XRCC6-208ENST00000478914 MTFR1LQ9H019 292 aa11.98□□□□□ -0.49
XRCC6-208ENST00000478914 SPG7Q9UQ90 795 aa11.98□□□□□ -0.49
XRCC6-208ENST00000478914 ATF5Q9Y2D1 282 aaPredicted RBP11.98□□□□□ -0.49
XRCC6-208ENST00000478914 TAF1LQ8IZX4 1826 aa11.97□□□□□ -0.49
XRCC6-208ENST00000478914 C5P01031 1676 aa11.97□□□□□ -0.49
XRCC6-208ENST00000478914 LRRC4BQ9NT99 713 aa11.97□□□□□ -0.49
XRCC6-208ENST00000478914 POLKQ9UBT6 870 aa11.97□□□□□ -0.49
XRCC6-208ENST00000478914 TOGARAM1Q9Y4F4 1720 aa11.97□□□□□ -0.49
XRCC6-208ENST00000478914 NCAPD2Q15021 1401 aa11.96□□□□□ -0.49
XRCC6-208ENST00000478914 HMGB2P26583 209 aaKnown RBP11.96□□□□□ -0.49
XRCC6-208ENST00000478914 TFCP2L1Q9NZI6 479 aa11.96□□□□□ -0.49
XRCC6-208ENST00000478914 CCNL1Q9UK58 526 aaPredicted RBP11.96□□□□□ -0.49
XRCC6-208ENST00000478914 KNSTRNQ9Y448 316 aa11.96□□□□□ -0.49
XRCC6-208ENST00000478914 ZNF827Q17R98 1081 aa11.95□□□□□ -0.5
XRCC6-208ENST00000478914 MORC1Q86VD1 984 aa11.95□□□□□ -0.5
XRCC6-208ENST00000478914 EYA1Q99502 592 aa11.95□□□□□ -0.5
XRCC6-208ENST00000478914 CYP27B1O15528 508 aa11.94□□□□□ -0.5
XRCC6-208ENST00000478914 KCNQ4P56696 695 aa11.94□□□□□ -0.5
XRCC6-208ENST00000478914 MPRIPQ6WCQ1 1025 aa11.94□□□□□ -0.5
XRCC6-208ENST00000478914 AKT1S1Q96B36 256 aa11.94□□□□□ -0.5
XRCC6-208ENST00000478914 PTGER2P43116 358 aa11.93□□□□□ -0.5
XRCC6-208ENST00000478914 EIF4A2Q14240 407 aaKnown RBP11.93□□□□□ -0.5
XRCC6-208ENST00000478914 SLC16A10Q8TF71 515 aa11.93□□□□□ -0.5
XRCC6-208ENST00000478914 SMARCC1Q92922 1105 aaPredicted RBP11.93□□□□□ -0.5
XRCC6-208ENST00000478914 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.93□□□□□ -0.5
XRCC6-208ENST00000478914 PALLDQ8WX93 1383 aa11.92□□□□□ -0.5
XRCC6-208ENST00000478914 COL24A1Q17RW2 1714 aa11.92□□□□□ -0.5
XRCC6-208ENST00000478914 MSH5O43196 834 aa11.92□□□□□ -0.5
XRCC6-208ENST00000478914 POLD1P28340 1107 aa11.92□□□□□ -0.5
XRCC6-208ENST00000478914 PLEKHG2Q9H7P9 1386 aa11.92□□□□□ -0.5
XRCC6-208ENST00000478914 KIF7Q2M1P5 1343 aa11.91□□□□□ -0.5
XRCC6-208ENST00000478914 PNPLA7Q6ZV29 1317 aa11.91□□□□□ -0.5
XRCC6-208ENST00000478914 IFNL2Q8IZJ0 200 aa11.91□□□□□ -0.5
XRCC6-208ENST00000478914 ARXQ96QS3 562 aa11.91□□□□□ -0.5
XRCC6-208ENST00000478914 FHDC1Q9C0D6 1143 aaPredicted RBP11.91□□□□□ -0.5
XRCC6-208ENST00000478914 IGSF1Q8N6C5 1336 aa11.9□□□□□ -0.5
XRCC6-208ENST00000478914 CHD4Q14839 1912 aa11.9□□□□□ -0.5
XRCC6-208ENST00000478914 C4BP0C0L5 1744 aa11.9□□□□□ -0.5
XRCC6-208ENST00000478914 NKX1-1Q15270 411 aaPredicted RBP11.9□□□□□ -0.5
XRCC6-208ENST00000478914 TMOD3Q9NYL9 352 aa11.9□□□□□ -0.5
XRCC6-208ENST00000478914 VIRMAQ69YN4 1812 aaKnown RBP11.89□□□□□ -0.51
XRCC6-208ENST00000478914 PHKG2P15735 406 aa11.89□□□□□ -0.51
XRCC6-208ENST00000478914 PLEKHO1Q53GL0 409 aaPredicted RBP11.89□□□□□ -0.51
XRCC6-208ENST00000478914 SGIP1Q9BQI5 828 aa11.89□□□□□ -0.51
XRCC6-208ENST00000478914 UBR3Q6ZT12 1888 aa11.89□□□□□ -0.51
XRCC6-208ENST00000478914 HSP90AB1P08238 724 aaKnown RBP11.88□□□□□ -0.51
XRCC6-208ENST00000478914 KLHL34Q8N239 644 aa11.88□□□□□ -0.51
XRCC6-208ENST00000478914 FLAD1Q8NFF5 587 aa11.88□□□□□ -0.51
XRCC6-208ENST00000478914 PIGBQ92521 554 aa11.88□□□□□ -0.51
XRCC6-208ENST00000478914 AK7Q96M32 723 aa11.88□□□□□ -0.51
XRCC6-208ENST00000478914 SYT17Q9BSW7 474 aa11.88□□□□□ -0.51
XRCC6-208ENST00000478914 AMOTQ4VCS5 1084 aa11.87□□□□□ -0.51
XRCC6-208ENST00000478914 AMER1Q5JTC6 1135 aaPredicted RBP11.86□□□□□ -0.51
XRCC6-208ENST00000478914 C1orf141Q5JVX7 400 aa11.86□□□□□ -0.51
XRCC6-208ENST00000478914 ZNF530Q6P9A1 599 aaPredicted RBP11.86□□□□□ -0.51
XRCC6-208ENST00000478914 POTEDQ86YR6 584 aa11.86□□□□□ -0.51
XRCC6-208ENST00000478914 MAP3K5Q99683 1374 aa11.86□□□□□ -0.51
XRCC6-208ENST00000478914 SCN11AQ9UI33 1791 aa11.86□□□□□ -0.51
XRCC6-208ENST00000478914 LOC102724428A0A0B4J2F2 783 aa11.85□□□□□ -0.51
XRCC6-208ENST00000478914 SIK1P57059 783 aa11.85□□□□□ -0.51
XRCC6-208ENST00000478914 COL23A1Q86Y22 540 aaPredicted RBP11.85□□□□□ -0.51
XRCC6-208ENST00000478914 DCAF5Q96JK2 942 aa11.85□□□□□ -0.51
XRCC6-208ENST00000478914 ZNF831Q5JPB2 1677 aa11.84□□□□□ -0.51
XRCC6-208ENST00000478914 ERVV-2B6SEH9 535 aa11.84□□□□□ -0.51
XRCC6-208ENST00000478914 CC2D1BQ5T0F9 858 aaKnown RBP11.84□□□□□ -0.51
XRCC6-208ENST00000478914 SULT6B1Q6IMI4 303 aa11.84□□□□□ -0.51
XRCC6-208ENST00000478914 ASAP1Q9ULH1 1129 aa11.84□□□□□ -0.51
XRCC6-208ENST00000478914 PHF14O94880 888 aa11.83□□□□□ -0.52
XRCC6-208ENST00000478914 IL13P35225 146 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms