RNA–Protein interactions for RNA: ENST00000478693.1

SRRT-211, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-211ENST00000478693 ZCRB1Q8TBF4 217 aaKnown RBP15.23■□□□□ 0.03
SRRT-211ENST00000478693 DDX54Q8TDD1 881 aaKnown RBP15.23■□□□□ 0.03
SRRT-211ENST00000478693 RGPD1P0DJD0 1748 aa15.22■□□□□ 0.03
SRRT-211ENST00000478693 PCDH11XQ9BZA7 1347 aa15.21■□□□□ 0.03
SRRT-211ENST00000478693 PCDH11YQ9BZA8 1340 aa15.21■□□□□ 0.03
SRRT-211ENST00000478693 U2AF1L5P0DN76 240 aaPredicted RBP15.21■□□□□ 0.03
SRRT-211ENST00000478693 U2AF1Q01081 240 aaKnown RBP eCLIP15.21■□□□□ 0.03
SRRT-211ENST00000478693 FAM196AQ6ZSG2 479 aa15.21■□□□□ 0.03
SRRT-211ENST00000478693 SPG7Q9UQ90 795 aa15.21■□□□□ 0.03
SRRT-211ENST00000478693 SF3B2Q13435 895 aaKnown RBP15.2■□□□□ 0.02
SRRT-211ENST00000478693 MARCH10Q8NA82 808 aaPredicted RBP15.19■□□□□ 0.02
SRRT-211ENST00000478693 KDRP35968 1356 aa15.19■□□□□ 0.02
SRRT-211ENST00000478693 SOCS7O14512 581 aa15.18■□□□□ 0.02
SRRT-211ENST00000478693 WDR43Q15061 677 aaKnown RBP eCLIP15.18■□□□□ 0.02
SRRT-211ENST00000478693 PLEKHO1Q53GL0 409 aaPredicted RBP15.18■□□□□ 0.02
SRRT-211ENST00000478693 PKD1L3Q7Z443 1732 aa15.17■□□□□ 0.02
SRRT-211ENST00000478693 PLEKHG2Q9H7P9 1386 aa15.17■□□□□ 0.02
SRRT-211ENST00000478693 NEFMP07197 916 aa15.17■□□□□ 0.02
SRRT-211ENST00000478693 AMOTQ4VCS5 1084 aa15.17■□□□□ 0.02
SRRT-211ENST00000478693 TRIM37O94972 964 aa15.16■□□□□ 0.02
SRRT-211ENST00000478693 PRKAR2BP31323 418 aa15.16■□□□□ 0.02
SRRT-211ENST00000478693 C1orf141Q5JVX7 400 aa15.16■□□□□ 0.02
SRRT-211ENST00000478693 ZNF530Q6P9A1 599 aaPredicted RBP15.16■□□□□ 0.02
SRRT-211ENST00000478693 ACSBG1Q96GR2 724 aa15.16■□□□□ 0.02
SRRT-211ENST00000478693 SHANK3Q9BYB0 1731 aa15.15■□□□□ 0.02
SRRT-211ENST00000478693 IFNL2Q8IZJ0 200 aa15.15■□□□□ 0.02
SRRT-211ENST00000478693 UPF1Q92900 1129 aaKnown RBP eCLIP15.15■□□□□ 0.02
SRRT-211ENST00000478693 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.15■□□□□ 0.02
SRRT-211ENST00000478693 DIEXFQ68CQ4 756 aaKnown RBP15.14■□□□□ 0.01
SRRT-211ENST00000478693 SYTL4Q96C24 671 aaPredicted RBP15.14■□□□□ 0.01
SRRT-211ENST00000478693 CYP27B1O15528 508 aa15.13■□□□□ 0.01
SRRT-211ENST00000478693 PHKG2P15735 406 aa15.13■□□□□ 0.01
SRRT-211ENST00000478693 RSPH6AQ9H0K4 717 aa15.13■□□□□ 0.01
SRRT-211ENST00000478693 PNNQ9H307 717 aaKnown RBP15.13■□□□□ 0.01
SRRT-211ENST00000478693 MRS2Q9HD23 443 aa15.13■□□□□ 0.01
SRRT-211ENST00000478693 MAPK8IP3Q9UPT6 1336 aa15.13■□□□□ 0.01
SRRT-211ENST00000478693 BCL9O00512 1426 aa15.12■□□□□ 0.01
SRRT-211ENST00000478693 FCHSD2O94868 740 aa15.12■□□□□ 0.01
SRRT-211ENST00000478693 HSP90AB1P08238 724 aaKnown RBP15.12■□□□□ 0.01
SRRT-211ENST00000478693 BAG6P46379 1132 aa15.12■□□□□ 0.01
SRRT-211ENST00000478693 CCDC125Q86Z20 511 aa15.12■□□□□ 0.01
SRRT-211ENST00000478693 GAS2L2Q8NHY3 880 aa15.12■□□□□ 0.01
SRRT-211ENST00000478693 DOT1LQ8TEK3 1739 aa15.12■□□□□ 0.01
SRRT-211ENST00000478693 NHSQ6T4R5 1651 aa15.1■□□□□ 0.01
SRRT-211ENST00000478693 APBA3O96018 575 aa15.1■□□□□ 0.01
SRRT-211ENST00000478693 MTHFSDQ2M296 383 aaKnown RBP15.1■□□□□ 0.01
SRRT-211ENST00000478693 AKAP4Q5JQC9 854 aa15.09■□□□□ 0.01
SRRT-211ENST00000478693 BCL11BQ9C0K0 894 aaPredicted RBP15.09■□□□□ 0.01
SRRT-211ENST00000478693 TNS1Q9HBL0 1735 aaKnown RBP15.09■□□□□ 0.01
SRRT-211ENST00000478693 KCNQ2O43526 872 aa15.08■□□□□ 0
SRRT-211ENST00000478693 PRIM1P49642 420 aaKnown RBP15.08■□□□□ 0
SRRT-211ENST00000478693 CCDC184Q52MB2 194 aa15.08■□□□□ 0
SRRT-211ENST00000478693 MAP3K5Q99683 1374 aa15.08■□□□□ 0
SRRT-211ENST00000478693 MPRIPQ6WCQ1 1025 aa15.07■□□□□ 0
SRRT-211ENST00000478693 DEFB132Q7Z7B7 95 aa15.07■□□□□ 0
SRRT-211ENST00000478693 CCDC146Q8IYE0 955 aa15.07■□□□□ 0
SRRT-211ENST00000478693 DCAF5Q96JK2 942 aa15.07■□□□□ 0
SRRT-211ENST00000478693 PHACTR3Q96KR7 559 aa15.07■□□□□ 0
SRRT-211ENST00000478693 NKX1-1Q15270 411 aaPredicted RBP15.06■□□□□ 0
SRRT-211ENST00000478693 TMOD3Q9NYL9 352 aa15.06■□□□□ 0
SRRT-211ENST00000478693 ADAMTS8Q9UP79 889 aa15.06■□□□□ 0
SRRT-211ENST00000478693 TOGARAM1Q9Y4F4 1720 aa15.06■□□□□ 0
SRRT-211ENST00000478693 SBF2Q86WG5 1849 aa15.06■□□□□ 0
SRRT-211ENST00000478693 GNAT3A8MTJ3 354 aa15.05■□□□□ -0
SRRT-211ENST00000478693 EN1Q05925 392 aaPredicted RBP15.05■□□□□ -0
SRRT-211ENST00000478693 PTF1AQ7RTS3 328 aa15.05■□□□□ -0
SRRT-211ENST00000478693 RTF1Q92541 710 aaKnown RBP15.05■□□□□ -0
SRRT-211ENST00000478693 KDM6AO15550 1401 aaPredicted RBP15.05■□□□□ -0
SRRT-211ENST00000478693 CABP4P57796 275 aa15.04■□□□□ -0
SRRT-211ENST00000478693 RUNDC1Q96C34 613 aa15.04■□□□□ -0
SRRT-211ENST00000478693 PLEKHF1Q96S99 279 aa15.04■□□□□ -0
SRRT-211ENST00000478693 BTAF1O14981 1849 aa15.02■□□□□ -0
SRRT-211ENST00000478693 ERVV-2B6SEH9 535 aa15.02■□□□□ -0
SRRT-211ENST00000478693 RNMTO43148 476 aaKnown RBP15.02■□□□□ -0
SRRT-211ENST00000478693 TEFQ10587 303 aa15.02■□□□□ -0
SRRT-211ENST00000478693 EZH2Q15910 746 aaKnown RBP15.02■□□□□ -0
SRRT-211ENST00000478693 NFE2L2Q16236 605 aa15.02■□□□□ -0
SRRT-211ENST00000478693 FAM9BQ8IZU0 186 aa15.02■□□□□ -0
SRRT-211ENST00000478693 NEUROD2Q15784 382 aa15□□□□□ -0.01
SRRT-211ENST00000478693 PIGBQ92521 554 aa15□□□□□ -0.01
SRRT-211ENST00000478693 LGR6Q9HBX8 967 aa15□□□□□ -0.01
SRRT-211ENST00000478693 RRP7AQ9Y3A4 280 aaKnown RBP15□□□□□ -0.01
SRRT-211ENST00000478693 PALLDQ8WX93 1383 aa14.99□□□□□ -0.01
SRRT-211ENST00000478693 CCER2I3L3R5 266 aa14.99□□□□□ -0.01
SRRT-211ENST00000478693 PLSCR1O15162 318 aa14.99□□□□□ -0.01
SRRT-211ENST00000478693 RIPK4P57078 832 aa14.99□□□□□ -0.01
SRRT-211ENST00000478693 LMOD3Q0VAK6 560 aa14.99□□□□□ -0.01
SRRT-211ENST00000478693 MCM10Q7L590 875 aa14.99□□□□□ -0.01
SRRT-211ENST00000478693 PNISRQ8TF01 805 aaKnown RBP14.99□□□□□ -0.01
SRRT-211ENST00000478693 SMARCC1Q92922 1105 aaPredicted RBP14.99□□□□□ -0.01
SRRT-211ENST00000478693 SLC52A2Q9HAB3 445 aa14.99□□□□□ -0.01
SRRT-211ENST00000478693 MRC1P22897 1456 aa14.99□□□□□ -0.01
SRRT-211ENST00000478693 RGPD3A6NKT7 1758 aaPredicted RBP14.98□□□□□ -0.01
SRRT-211ENST00000478693 RGPD4Q7Z3J3 1758 aa14.98□□□□□ -0.01
SRRT-211ENST00000478693 SCN11AQ9UI33 1791 aa14.98□□□□□ -0.01
SRRT-211ENST00000478693 DCTN1Q14203 1278 aa14.98□□□□□ -0.01
SRRT-211ENST00000478693 MIER1Q8N108 512 aa14.98□□□□□ -0.01
SRRT-211ENST00000478693 NFATC2IPQ8NCF5 419 aa14.98□□□□□ -0.01
SRRT-211ENST00000478693 CAMKK2Q96RR4 588 aa14.98□□□□□ -0.01
SRRT-211ENST00000478693 ITGB4P16144 1822 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms