RNA–Protein interactions for RNA: ENST00000478653.6

NBPF3-210, Transcript of NBPF member 3, humanhuman

TSL 3

Gene NBPF3, Length 1,417 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3-210ENST00000478653 MEGF6O75095 1541 aa27.36■■□□□ 1.97
NBPF3-210ENST00000478653 POLD1P28340 1107 aa27.36■■□□□ 1.97
NBPF3-210ENST00000478653 CDCA8Q53HL2 280 aa27.36■■□□□ 1.97
NBPF3-210ENST00000478653 LY75O60449 1722 aa27.36■■□□□ 1.97
NBPF3-210ENST00000478653 SHANK3Q9BYB0 1731 aa27.36■■□□□ 1.97
NBPF3-210ENST00000478653 TFCP2L1Q9NZI6 479 aa27.35■■□□□ 1.97
NBPF3-210ENST00000478653 NSD2O96028 1365 aa27.35■■□□□ 1.97
NBPF3-210ENST00000478653 USP47Q96K76 1375 aa27.35■■□□□ 1.97
NBPF3-210ENST00000478653 FYB1O15117 783 aa27.34■■□□□ 1.97
NBPF3-210ENST00000478653 HMGB2P26583 209 aaKnown RBP27.34■■□□□ 1.97
NBPF3-210ENST00000478653 KIF24Q5T7B8 1368 aa27.34■■□□□ 1.97
NBPF3-210ENST00000478653 PNPLA7Q6ZV29 1317 aa27.34■■□□□ 1.97
NBPF3-210ENST00000478653 RGPD2P0DJD1 1756 aa27.33■■□□□ 1.97
NBPF3-210ENST00000478653 COL24A1Q17RW2 1714 aa27.33■■□□□ 1.97
NBPF3-210ENST00000478653 FBLN1P23142 703 aa27.33■■□□□ 1.96
NBPF3-210ENST00000478653 ZNF784Q8NCA9 323 aaPredicted RBP27.33■■□□□ 1.96
NBPF3-210ENST00000478653 RAPGEF4Q8WZA2 1011 aa27.33■■□□□ 1.96
NBPF3-210ENST00000478653 CHD4Q14839 1912 aa27.32■■□□□ 1.96
NBPF3-210ENST00000478653 RRS1Q15050 365 aaKnown RBP27.32■■□□□ 1.96
NBPF3-210ENST00000478653 NBPF6Q5VWK0 638 aa27.31■■□□□ 1.96
NBPF3-210ENST00000478653 NBPF4Q96M43 638 aa27.31■■□□□ 1.96
NBPF3-210ENST00000478653 GGNBP2Q9H3C7 697 aa27.31■■□□□ 1.96
NBPF3-210ENST00000478653 INSRP06213 1382 aa27.3■■□□□ 1.96
NBPF3-210ENST00000478653 CCNL1Q9UK58 526 aaPredicted RBP27.3■■□□□ 1.96
NBPF3-210ENST00000478653 UTRNP46939 3433 aa27.3■■□□□ 1.96
NBPF3-210ENST00000478653 FLT4P35916 1363 aa27.29■■□□□ 1.96
NBPF3-210ENST00000478653 KIF20BQ96Q89 1820 aa27.29■■□□□ 1.96
NBPF3-210ENST00000478653 TATP17735 454 aaPredicted RBP27.28■■□□□ 1.96
NBPF3-210ENST00000478653 TUBGCP6Q96RT7 1819 aa27.28■■□□□ 1.96
NBPF3-210ENST00000478653 PCDH11XQ9BZA7 1347 aa27.27■■□□□ 1.96
NBPF3-210ENST00000478653 PCDH11YQ9BZA8 1340 aa27.27■■□□□ 1.96
NBPF3-210ENST00000478653 GPR162Q16538 588 aa27.26■■□□□ 1.95
NBPF3-210ENST00000478653 KCNQ4P56696 695 aa27.25■■□□□ 1.95
NBPF3-210ENST00000478653 KLHL34Q8N239 644 aa27.24■■□□□ 1.95
NBPF3-210ENST00000478653 USHBP1Q8N6Y0 703 aa27.24■■□□□ 1.95
NBPF3-210ENST00000478653 HSP90AB2PQ58FF8 381 aa27.22■■□□□ 1.95
NBPF3-210ENST00000478653 TRIM26Q12899 539 aaPredicted RBP27.18■■□□□ 1.94
NBPF3-210ENST00000478653 FLAD1Q8NFF5 587 aa27.18■■□□□ 1.94
NBPF3-210ENST00000478653 C5P01031 1676 aa27.18■■□□□ 1.94
NBPF3-210ENST00000478653 MSH5O43196 834 aa27.17■■□□□ 1.94
NBPF3-210ENST00000478653 COL23A1Q86Y22 540 aaPredicted RBP27.16■■□□□ 1.94
NBPF3-210ENST00000478653 PALLDQ8WX93 1383 aa27.16■■□□□ 1.94
NBPF3-210ENST00000478653 NSD3Q9BZ95 1437 aa27.16■■□□□ 1.94
NBPF3-210ENST00000478653 SMARCC1Q92922 1105 aaPredicted RBP27.16■■□□□ 1.94
NBPF3-210ENST00000478653 PELP1Q8IZL8 1130 aaKnown RBP27.15■■□□□ 1.94
NBPF3-210ENST00000478653 TIMELESSQ9UNS1 1208 aa27.15■■□□□ 1.94
NBPF3-210ENST00000478653 PKD1L3Q7Z443 1732 aa27.14■■□□□ 1.94
NBPF3-210ENST00000478653 NCAPD2Q15021 1401 aa27.14■■□□□ 1.94
NBPF3-210ENST00000478653 CARD14Q9BXL6 1004 aa27.14■■□□□ 1.93
NBPF3-210ENST00000478653 MPRIPQ6WCQ1 1025 aa27.13■■□□□ 1.93
NBPF3-210ENST00000478653 NLGN2Q8NFZ4 835 aa27.13■■□□□ 1.93
NBPF3-210ENST00000478653 ANKRD26Q9UPS8 1709 aa27.13■■□□□ 1.93
NBPF3-210ENST00000478653 CYP27B1O15528 508 aa27.12■■□□□ 1.93
NBPF3-210ENST00000478653 GRIN3BO60391 1043 aa27.12■■□□□ 1.93
NBPF3-210ENST00000478653 EMILIN1Q9Y6C2 1016 aa27.11■■□□□ 1.93
NBPF3-210ENST00000478653 SPG7Q9UQ90 795 aa27.1■■□□□ 1.93
NBPF3-210ENST00000478653 TAF1LQ8IZX4 1826 aa27.1■■□□□ 1.93
NBPF3-210ENST00000478653 C1QTNF8P60827 252 aa27.09■■□□□ 1.93
NBPF3-210ENST00000478653 TOGARAM1Q9Y4F4 1720 aa27.09■■□□□ 1.93
NBPF3-210ENST00000478653 WASHC2AQ641Q2 1341 aa27.09■■□□□ 1.93
NBPF3-210ENST00000478653 NKX1-1Q15270 411 aaPredicted RBP27.08■■□□□ 1.93
NBPF3-210ENST00000478653 C4BP0C0L5 1744 aa27.07■■□□□ 1.92
NBPF3-210ENST00000478653 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.07■■□□□ 1.92
NBPF3-210ENST00000478653 CD2APQ9Y5K6 639 aa27.07■■□□□ 1.92
NBPF3-210ENST00000478653 ITGB4P16144 1822 aa27.07■■□□□ 1.92
NBPF3-210ENST00000478653 PPM1GO15355 546 aaPredicted RBP27.07■■□□□ 1.92
NBPF3-210ENST00000478653 MSL1Q68DK7 614 aa27.07■■□□□ 1.92
NBPF3-210ENST00000478653 AK7Q96M32 723 aa27.07■■□□□ 1.92
NBPF3-210ENST00000478653 GOLGB1Q14789 3259 aaKnown RBP27.05■■□□□ 1.92
NBPF3-210ENST00000478653 PLEKHG2Q9H7P9 1386 aa27.05■■□□□ 1.92
NBPF3-210ENST00000478653 GIGYF1O75420 1035 aaPredicted RBP27.04■■□□□ 1.92
NBPF3-210ENST00000478653 YBX3P16989 372 aaKnown RBP eCLIP27.03■■□□□ 1.92
NBPF3-210ENST00000478653 PIGBQ92521 554 aa27.03■■□□□ 1.92
NBPF3-210ENST00000478653 CLSPNQ9HAW4 1339 aa27.03■■□□□ 1.92
NBPF3-210ENST00000478653 SENP3-EIF4A1A0A087X0R7 540 aa27.01■■□□□ 1.91
NBPF3-210ENST00000478653 EYA1Q99502 592 aa27■■□□□ 1.91
NBPF3-210ENST00000478653 TMOD3Q9NYL9 352 aa27■■□□□ 1.91
NBPF3-210ENST00000478653 SSFA2P28290 1259 aa26.99■■□□□ 1.91
NBPF3-210ENST00000478653 MAP2P11137 1827 aaKnown RBP26.99■■□□□ 1.91
NBPF3-210ENST00000478653 LOC102724428A0A0B4J2F2 783 aa26.99■■□□□ 1.91
NBPF3-210ENST00000478653 SIK1P57059 783 aa26.99■■□□□ 1.91
NBPF3-210ENST00000478653 IFNL2Q8IZJ0 200 aa26.99■■□□□ 1.91
NBPF3-210ENST00000478653 POLKQ9UBT6 870 aa26.99■■□□□ 1.91
NBPF3-210ENST00000478653 UBR3Q6ZT12 1888 aa26.98■■□□□ 1.91
NBPF3-210ENST00000478653 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.97■■□□□ 1.91
NBPF3-210ENST00000478653 PHKG2P15735 406 aa26.96■■□□□ 1.91
NBPF3-210ENST00000478653 PHF14O94880 888 aa26.94■■□□□ 1.9
NBPF3-210ENST00000478653 LINC00116Q8NCU8 138 aa26.92■■□□□ 1.9
NBPF3-210ENST00000478653 EIF4A2Q14240 407 aaKnown RBP26.91■■□□□ 1.9
NBPF3-210ENST00000478653 AMIGO3Q86WK7 504 aa26.91■■□□□ 1.9
NBPF3-210ENST00000478653 ATP6V1AP38606 617 aa26.9■■□□□ 1.9
NBPF3-210ENST00000478653 ASAP1Q9ULH1 1129 aa26.9■■□□□ 1.9
NBPF3-210ENST00000478653 GNPATO15228 680 aa26.9■■□□□ 1.9
NBPF3-210ENST00000478653 HSP90AB1P08238 724 aaKnown RBP26.9■■□□□ 1.9
NBPF3-210ENST00000478653 POLR3GLQ9BT43 218 aa26.9■■□□□ 1.9
NBPF3-210ENST00000478653 ATP10DQ9P241 1426 aa26.88■■□□□ 1.89
NBPF3-210ENST00000478653 IGSF1Q8N6C5 1336 aa26.88■■□□□ 1.89
NBPF3-210ENST00000478653 ERVV-2B6SEH9 535 aa26.88■■□□□ 1.89
NBPF3-210ENST00000478653 TNNT2P45379 298 aaPredicted RBP26.87■■□□□ 1.89
NBPF3-210ENST00000478653 ITPK1Q13572 414 aa26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms