RNA–Protein interactions for RNA: ENST00000478563.1

CDK13-204, Transcript of cyclin dependent kinase 13, humanhuman

TSL 4

Gene CDK13, Length 700 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-204ENST00000478563 PPP1R15AO75807 674 aaPredicted RBP10.65□□□□□ -0.7
CDK13-204ENST00000478563 LINC00528Q8N1L1 170 aa10.65□□□□□ -0.7
CDK13-204ENST00000478563 INTS6LQ5JSJ4 861 aaKnown RBP10.64□□□□□ -0.71
CDK13-204ENST00000478563 XP32Q5T750 250 aa10.64□□□□□ -0.71
CDK13-204ENST00000478563 ZNF385CQ66K41 422 aaPredicted RBP10.64□□□□□ -0.71
CDK13-204ENST00000478563 GZF1Q9H116 711 aaPredicted RBP10.64□□□□□ -0.71
CDK13-204ENST00000478563 DNMT3LQ9UJW3 386 aa10.64□□□□□ -0.71
CDK13-204ENST00000478563 ACIN1Q9UKV3 1341 aaKnown RBP10.63□□□□□ -0.71
CDK13-204ENST00000478563 BMP2P12643 396 aa10.63□□□□□ -0.71
CDK13-204ENST00000478563 TMCO4Q5TGY1 634 aa10.63□□□□□ -0.71
CDK13-204ENST00000478563 Q6ZVU0 165 aa10.63□□□□□ -0.71
CDK13-204ENST00000478563 DNMT3AQ9Y6K1 912 aaPredicted RBP10.63□□□□□ -0.71
CDK13-204ENST00000478563 GPR37L1O60883 481 aa10.62□□□□□ -0.71
CDK13-204ENST00000478563 IRS1P35568 1242 aa10.62□□□□□ -0.71
CDK13-204ENST00000478563 SOS2Q07890 1332 aaPredicted RBP10.61□□□□□ -0.71
CDK13-204ENST00000478563 SOCS7O14512 581 aa10.61□□□□□ -0.71
CDK13-204ENST00000478563 CBLBQ13191 982 aa10.61□□□□□ -0.71
CDK13-204ENST00000478563 COL25A1Q9BXS0 654 aaPredicted RBP10.61□□□□□ -0.71
CDK13-204ENST00000478563 ESPNB1AK53 854 aa10.6□□□□□ -0.71
CDK13-204ENST00000478563 RNFT1Q5M7Z0 435 aa10.6□□□□□ -0.71
CDK13-204ENST00000478563 PNMA1Q8ND90 353 aa10.6□□□□□ -0.71
CDK13-204ENST00000478563 WHAMMQ8TF30 809 aa10.6□□□□□ -0.71
CDK13-204ENST00000478563 IGHA1P01876 353 aa10.59□□□□□ -0.71
CDK13-204ENST00000478563 TSEN34Q9BSV6 310 aaKnown RBP10.59□□□□□ -0.71
CDK13-204ENST00000478563 DHX9Q08211 1270 aaKnown RBP10.58□□□□□ -0.72
CDK13-204ENST00000478563 SVOPQ8N4V2 548 aa10.58□□□□□ -0.72
CDK13-204ENST00000478563 PGPEP1Q9NXJ5 209 aa10.58□□□□□ -0.72
CDK13-204ENST00000478563 ARHGEF15O94989 841 aa10.57□□□□□ -0.72
CDK13-204ENST00000478563 RGS22Q8NE09 1264 aa10.57□□□□□ -0.72
CDK13-204ENST00000478563 TMPRSS4Q9NRS4 437 aa10.57□□□□□ -0.72
CDK13-204ENST00000478563 MTMR7Q9Y216 660 aa10.57□□□□□ -0.72
CDK13-204ENST00000478563 FBXO45P0C2W1 286 aa10.56□□□□□ -0.72
CDK13-204ENST00000478563 MFAP1P55081 439 aaKnown RBP10.56□□□□□ -0.72
CDK13-204ENST00000478563 PDE4CQ08493 712 aa10.56□□□□□ -0.72
CDK13-204ENST00000478563 NBPF20Q3BBV1 942 aa10.56□□□□□ -0.72
CDK13-204ENST00000478563 DZIP3Q86Y13 1208 aaKnown RBP10.56□□□□□ -0.72
CDK13-204ENST00000478563 ZBBXA8MT70 800 aa10.55□□□□□ -0.72
CDK13-204ENST00000478563 SPINT1O43278 529 aa10.55□□□□□ -0.72
CDK13-204ENST00000478563 LILRA1O75019 489 aa10.55□□□□□ -0.72
CDK13-204ENST00000478563 UPP2O95045 317 aa10.55□□□□□ -0.72
CDK13-204ENST00000478563 RFX1P22670 979 aa10.55□□□□□ -0.72
CDK13-204ENST00000478563 HDGFL1Q5TGJ6 251 aa10.55□□□□□ -0.72
CDK13-204ENST00000478563 ERVH48-1M5A8F1 160 aa10.54□□□□□ -0.72
CDK13-204ENST00000478563 PTSQ03393 145 aa10.54□□□□□ -0.72
CDK13-204ENST00000478563 KDF1Q8NAX2 398 aaPredicted RBP10.54□□□□□ -0.72
CDK13-204ENST00000478563 ZNF784Q8NCA9 323 aaPredicted RBP10.54□□□□□ -0.72
CDK13-204ENST00000478563 PBXIP1Q96AQ6 731 aa10.54□□□□□ -0.72
CDK13-204ENST00000478563 NDUFB9Q9Y6M9 179 aa10.54□□□□□ -0.72
CDK13-204ENST00000478563 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.53□□□□□ -0.72
CDK13-204ENST00000478563 ADD1P35611 737 aaKnown RBP10.53□□□□□ -0.72
CDK13-204ENST00000478563 ADAMTS19Q8TE59 1207 aa10.53□□□□□ -0.72
CDK13-204ENST00000478563 NANOS1Q8WY41 292 aaKnown RBP10.53□□□□□ -0.72
CDK13-204ENST00000478563 SLURP2P0DP57 97 aa10.52□□□□□ -0.73
CDK13-204ENST00000478563 AGBL1Q96MI9 1066 aa10.52□□□□□ -0.73
CDK13-204ENST00000478563 TTLL8A6PVC2 850 aa10.51□□□□□ -0.73
CDK13-204ENST00000478563 FOXK2Q01167 660 aa10.51□□□□□ -0.73
CDK13-204ENST00000478563 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.51□□□□□ -0.73
CDK13-204ENST00000478563 FOXD4L5Q5VV16 416 aaPredicted RBP10.5□□□□□ -0.73
CDK13-204ENST00000478563 KANK3Q6NY19 840 aa10.5□□□□□ -0.73
CDK13-204ENST00000478563 SEPT12Q8IYM1 358 aa10.5□□□□□ -0.73
CDK13-204ENST00000478563 FOXD4L4Q8WXT5 416 aaPredicted RBP10.5□□□□□ -0.73
CDK13-204ENST00000478563 GIGYF1O75420 1035 aaPredicted RBP10.49□□□□□ -0.73
CDK13-204ENST00000478563 MARSP56192 900 aaKnown RBP10.49□□□□□ -0.73
CDK13-204ENST00000478563 RAB15P59190 212 aa10.49□□□□□ -0.73
CDK13-204ENST00000478563 WASHC4Q2M389 1173 aa10.49□□□□□ -0.73
CDK13-204ENST00000478563 CFAP70Q5T0N1 1121 aa10.49□□□□□ -0.73
CDK13-204ENST00000478563 FIGNL2A6NMB9 653 aa10.48□□□□□ -0.73
CDK13-204ENST00000478563 ADH1AP07327 375 aa10.48□□□□□ -0.73
CDK13-204ENST00000478563 CSB-PGBD3P0DP91 1061 aa10.48□□□□□ -0.73
CDK13-204ENST00000478563 CTSOP43234 321 aaPredicted RBP10.48□□□□□ -0.73
CDK13-204ENST00000478563 RELBQ01201 579 aa10.48□□□□□ -0.73
CDK13-204ENST00000478563 NR1H3Q13133 447 aa10.48□□□□□ -0.73
CDK13-204ENST00000478563 CCDC155Q8N6L0 562 aa10.48□□□□□ -0.73
CDK13-204ENST00000478563 PATL2C9JE40 543 aaKnown RBP10.47□□□□□ -0.73
CDK13-204ENST00000478563 VAC14Q08AM6 782 aa10.47□□□□□ -0.73
CDK13-204ENST00000478563 USTQ9Y2C2 406 aa10.47□□□□□ -0.73
CDK13-204ENST00000478563 PCDHB9Q9Y5E1 797 aa10.47□□□□□ -0.73
CDK13-204ENST00000478563 BRD1O95696 1058 aa10.46□□□□□ -0.73
CDK13-204ENST00000478563 VWA5B2Q8N398 1253 aa10.46□□□□□ -0.73
CDK13-204ENST00000478563 INSM2Q96T92 566 aaPredicted RBP10.46□□□□□ -0.73
CDK13-204ENST00000478563 KRTAP4-8Q9BYQ9 185 aa10.46□□□□□ -0.73
CDK13-204ENST00000478563 PPP1R12CQ9BZL4 782 aa10.46□□□□□ -0.73
CDK13-204ENST00000478563 CARNS1A5YM72 827 aa10.45□□□□□ -0.74
CDK13-204ENST00000478563 ADAM23O75077 832 aa10.45□□□□□ -0.74
CDK13-204ENST00000478563 KCNA1Q09470 495 aa10.45□□□□□ -0.74
CDK13-204ENST00000478563 ZNF395Q9H8N7 513 aaPredicted RBP10.45□□□□□ -0.74
CDK13-204ENST00000478563 PTGIRP43119 386 aa10.44□□□□□ -0.74
CDK13-204ENST00000478563 SRPK2P78362 688 aaKnown RBP10.44□□□□□ -0.74
CDK13-204ENST00000478563 RNF217Q8TC41 542 aa10.44□□□□□ -0.74
CDK13-204ENST00000478563 SCARF2Q96GP6 870 aaPredicted RBP10.44□□□□□ -0.74
CDK13-204ENST00000478563 SLC35F4A4IF30 521 aa10.43□□□□□ -0.74
CDK13-204ENST00000478563 RBM25P49756 843 aaKnown RBP10.43□□□□□ -0.74
CDK13-204ENST00000478563 ZNF428Q96B54 188 aa10.43□□□□□ -0.74
CDK13-204ENST00000478563 CYLDQ9NQC7 956 aa10.43□□□□□ -0.74
CDK13-204ENST00000478563 MCCD1P59942 119 aaPredicted RBP10.42□□□□□ -0.74
CDK13-204ENST00000478563 PALM3A6NDB9 673 aaPredicted RBP10.41□□□□□ -0.74
CDK13-204ENST00000478563 ITGB2P05107 769 aa10.41□□□□□ -0.74
CDK13-204ENST00000478563 LMOD1P29536 600 aaPredicted RBP10.41□□□□□ -0.74
CDK13-204ENST00000478563 ERVK-9P63128 1117 aa10.41□□□□□ -0.74
CDK13-204ENST00000478563 LYPD4Q6UWN0 246 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms