RNA–Protein interactions for RNA: ENST00000478424.5

ARF1-209, Transcript of ADP ribosylation factor 1, humanhuman

TSL 2

Gene ARF1, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF1-209ENST00000478424 RAPGEF4Q8WZA2 1011 aa34.51■■■■□ 3.12
ARF1-209ENST00000478424 HSP90AB2PQ58FF8 381 aa34.5■■■■□ 3.11
ARF1-209ENST00000478424 DOT1LQ8TEK3 1739 aa34.5■■■■□ 3.11
ARF1-209ENST00000478424 FLT4P35916 1363 aa34.49■■■■□ 3.11
ARF1-209ENST00000478424 PRIM1P49642 420 aaKnown RBP34.48■■■■□ 3.11
ARF1-209ENST00000478424 PPM1GO15355 546 aaPredicted RBP34.47■■■■□ 3.11
ARF1-209ENST00000478424 PAPPAQ13219 1627 aa34.46■■■■□ 3.11
ARF1-209ENST00000478424 SHANK3Q9BYB0 1731 aa34.46■■■■□ 3.11
ARF1-209ENST00000478424 INSRP06213 1382 aa34.46■■■■□ 3.11
ARF1-209ENST00000478424 DCAF8L1A6NGE4 600 aa34.45■■■■□ 3.11
ARF1-209ENST00000478424 TATP17735 454 aaPredicted RBP34.45■■■■□ 3.11
ARF1-209ENST00000478424 ZNF827Q17R98 1081 aa34.45■■■■□ 3.11
ARF1-209ENST00000478424 CCER1Q8TC90 406 aaPredicted RBP34.45■■■■□ 3.11
ARF1-209ENST00000478424 LRRC4BQ9NT99 713 aa34.45■■■■□ 3.11
ARF1-209ENST00000478424 EMILIN1Q9Y6C2 1016 aa34.45■■■■□ 3.11
ARF1-209ENST00000478424 KCNQ4P56696 695 aa34.42■■■■□ 3.1
ARF1-209ENST00000478424 MTFR1LQ9H019 292 aa34.42■■■■□ 3.1
ARF1-209ENST00000478424 CGNL1Q0VF96 1302 aa34.41■■■■□ 3.1
ARF1-209ENST00000478424 PTGER2P43116 358 aa34.41■■■■□ 3.1
ARF1-209ENST00000478424 SLC27A3Q5K4L6 730 aa34.39■■■■□ 3.1
ARF1-209ENST00000478424 KIF24Q5T7B8 1368 aa34.38■■■■□ 3.09
ARF1-209ENST00000478424 NSD2O96028 1365 aa34.37■■■■□ 3.09
ARF1-209ENST00000478424 EIF4G2P78344 907 aaKnown RBP eCLIP34.36■■■■□ 3.096e-6■□□□□ 8.5
ARF1-209ENST00000478424 PCDH11XQ9BZA7 1347 aa34.35■■■■□ 3.09
ARF1-209ENST00000478424 PCDH11YQ9BZA8 1340 aa34.35■■■■□ 3.09
ARF1-209ENST00000478424 HSPA5P11021 654 aaKnown RBP34.35■■■■□ 3.09
ARF1-209ENST00000478424 TNNT2P45379 298 aaPredicted RBP34.34■■■■□ 3.09
ARF1-209ENST00000478424 YY1P25490 414 aa34.33■■■■□ 3.09
ARF1-209ENST00000478424 FHDC1Q9C0D6 1143 aaPredicted RBP34.33■■■■□ 3.09
ARF1-209ENST00000478424 CCNL1Q9UK58 526 aaPredicted RBP34.33■■■■□ 3.09
ARF1-209ENST00000478424 AKT1S1Q96B36 256 aa34.32■■■■□ 3.08
ARF1-209ENST00000478424 TFCP2L1Q9NZI6 479 aa34.32■■■■□ 3.08
ARF1-209ENST00000478424 ARXQ96QS3 562 aa34.28■■■■□ 3.08
ARF1-209ENST00000478424 LY75O60449 1722 aa34.27■■■■□ 3.08
ARF1-209ENST00000478424 KLHL34Q8N239 644 aa34.27■■■■□ 3.08
ARF1-209ENST00000478424 MAP2P11137 1827 aaKnown RBP34.26■■■■□ 3.08
ARF1-209ENST00000478424 SGIP1Q9BQI5 828 aa34.26■■■■□ 3.08
ARF1-209ENST00000478424 ANKRD26Q9UPS8 1709 aa34.26■■■■□ 3.07
ARF1-209ENST00000478424 PNPLA7Q6ZV29 1317 aa34.26■■■■□ 3.07
ARF1-209ENST00000478424 MPRIPQ6WCQ1 1025 aa34.25■■■■□ 3.07
ARF1-209ENST00000478424 CYP27B1O15528 508 aa34.24■■■■□ 3.07
ARF1-209ENST00000478424 MSH5O43196 834 aa34.24■■■■□ 3.07
ARF1-209ENST00000478424 SYT17Q9BSW7 474 aa34.24■■■■□ 3.07
ARF1-209ENST00000478424 WASHC2AQ641Q2 1341 aa34.24■■■■□ 3.07
ARF1-209ENST00000478424 TUBGCP6Q96RT7 1819 aa34.23■■■■□ 3.07
ARF1-209ENST00000478424 PANK3Q9H999 370 aa34.22■■■■□ 3.07
ARF1-209ENST00000478424 POLKQ9UBT6 870 aa34.22■■■■□ 3.07
ARF1-209ENST00000478424 EYA1Q99502 592 aa34.21■■■■□ 3.07
ARF1-209ENST00000478424 POLD1P28340 1107 aa34.2■■■■□ 3.07
ARF1-209ENST00000478424 SPG7Q9UQ90 795 aa34.2■■■■□ 3.07
ARF1-209ENST00000478424 QSER1Q2KHR3 1735 aa34.2■■■■□ 3.07
ARF1-209ENST00000478424 PKD1L3Q7Z443 1732 aa34.2■■■■□ 3.07
ARF1-209ENST00000478424 SLC16A10Q8TF71 515 aa34.19■■■■□ 3.06
ARF1-209ENST00000478424 PALLDQ8WX93 1383 aa34.19■■■■□ 3.06
ARF1-209ENST00000478424 TOGARAM1Q9Y4F4 1720 aa34.17■■■■□ 3.06
ARF1-209ENST00000478424 NCAPD2Q15021 1401 aa34.16■■■■□ 3.06
ARF1-209ENST00000478424 EIF4A2Q14240 407 aaKnown RBP34.14■■■■□ 3.06
ARF1-209ENST00000478424 ITGB4P16144 1822 aa34.12■■■■□ 3.05
ARF1-209ENST00000478424 C5P01031 1676 aa34.12■■■■□ 3.05
ARF1-209ENST00000478424 MSL1Q68DK7 614 aa34.1■■■■□ 3.05
ARF1-209ENST00000478424 SMARCC1Q92922 1105 aaPredicted RBP34.1■■■■□ 3.05
ARF1-209ENST00000478424 COL23A1Q86Y22 540 aaPredicted RBP34.09■■■■□ 3.05
ARF1-209ENST00000478424 PIGBQ92521 554 aa34.09■■■■□ 3.05
ARF1-209ENST00000478424 MORC1Q86VD1 984 aa34.08■■■■□ 3.05
ARF1-209ENST00000478424 PELP1Q8IZL8 1130 aaKnown RBP34.07■■■■□ 3.04
ARF1-209ENST00000478424 TMOD3Q9NYL9 352 aa34.07■■■■□ 3.04
ARF1-209ENST00000478424 MAP3K5Q99683 1374 aa34.07■■■■□ 3.04
ARF1-209ENST00000478424 NKX1-1Q15270 411 aaPredicted RBP34.05■■■■□ 3.04
ARF1-209ENST00000478424 IFNL2Q8IZJ0 200 aa34.05■■■■□ 3.04
ARF1-209ENST00000478424 AK7Q96M32 723 aa34.05■■■■□ 3.04
ARF1-209ENST00000478424 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP34.05■■■■□ 3.04
ARF1-209ENST00000478424 PHKG2P15735 406 aa34.04■■■■□ 3.04
ARF1-209ENST00000478424 GPR162Q16538 588 aa34.04■■■■□ 3.04
ARF1-209ENST00000478424 KNSTRNQ9Y448 316 aa34.04■■■■□ 3.04
ARF1-209ENST00000478424 TAF1LQ8IZX4 1826 aa34.02■■■■□ 3.04
ARF1-209ENST00000478424 PHF14O94880 888 aa34.01■■■■□ 3.03
ARF1-209ENST00000478424 IGSF1Q8N6C5 1336 aa34.01■■■■□ 3.03
ARF1-209ENST00000478424 C4BP0C0L5 1744 aa34■■■■□ 3.03
ARF1-209ENST00000478424 HMGB2P26583 209 aaKnown RBP34■■■■□ 3.03
ARF1-209ENST00000478424 COL24A1Q17RW2 1714 aa33.99■■■■□ 3.03
ARF1-209ENST00000478424 NLGN2Q8NFZ4 835 aa33.98■■■■□ 3.03
ARF1-209ENST00000478424 ASAP1Q9ULH1 1129 aa33.98■■■■□ 3.03
ARF1-209ENST00000478424 LOC102724428A0A0B4J2F2 783 aa33.97■■■■□ 3.03
ARF1-209ENST00000478424 SIK1P57059 783 aa33.97■■■■□ 3.03
ARF1-209ENST00000478424 FLAD1Q8NFF5 587 aa33.97■■■■□ 3.03
ARF1-209ENST00000478424 SMIM5Q71RC9 77 aa33.95■■■■□ 3.03
ARF1-209ENST00000478424 ZNF530Q6P9A1 599 aaPredicted RBP33.94■■■■□ 3.02
ARF1-209ENST00000478424 KIF7Q2M1P5 1343 aa33.94■■■■□ 3.02
ARF1-209ENST00000478424 PLEKHO1Q53GL0 409 aaPredicted RBP33.93■■■■□ 3.02
ARF1-209ENST00000478424 AEBP1Q8IUX7 1158 aa33.93■■■■□ 3.02
ARF1-209ENST00000478424 AMIGO3Q86WK7 504 aa33.92■■■■□ 3.02
ARF1-209ENST00000478424 LINC00116Q8NCU8 138 aa33.92■■■■□ 3.02
ARF1-209ENST00000478424 ATP6V1AP38606 617 aa33.91■■■■□ 3.02
ARF1-209ENST00000478424 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP33.9■■■■□ 3.02
ARF1-209ENST00000478424 CHD4Q14839 1912 aa33.9■■■■□ 3.02
ARF1-209ENST00000478424 ATG3Q9NT62 314 aa33.89■■■■□ 3.02
ARF1-209ENST00000478424 PLEKHG2Q9H7P9 1386 aa33.88■■■■□ 3.01
ARF1-209ENST00000478424 GNPATO15228 680 aa33.88■■■■□ 3.01
ARF1-209ENST00000478424 HSP90AB1P08238 724 aaKnown RBP33.88■■■■□ 3.01
ARF1-209ENST00000478424 ITPK1Q13572 414 aa33.88■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 348.7 ms