RNA–Protein interactions for RNA: ENST00000478254.5

GFM1-207, Transcript of G elongation factor mitochondrial 1, humanhuman

TSL 5

Gene GFM1, Length 3,470 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM1-207ENST00000478254 CCDC112Q8NEF3 446 aa13.69□□□□□ -0.22
GFM1-207ENST00000478254 STAC3Q96MF2 364 aa13.69□□□□□ -0.22
GFM1-207ENST00000478254 SRCIN1Q9C0H9 1055 aa13.69□□□□□ -0.22
GFM1-207ENST00000478254 SCAPERQ9BY12 1400 aa13.69□□□□□ -0.22
GFM1-207ENST00000478254 SYNMO15061 1565 aa13.69□□□□□ -0.22
GFM1-207ENST00000478254 SYCP2Q9BX26 1530 aa13.69□□□□□ -0.22
GFM1-207ENST00000478254 ZMYM3Q14202 1370 aa13.69□□□□□ -0.22
GFM1-207ENST00000478254 NPC1L1Q9UHC9 1359 aa13.69□□□□□ -0.22
GFM1-207ENST00000478254 KDM4AO75164 1064 aa13.69□□□□□ -0.22
GFM1-207ENST00000478254 CCDC83Q8IWF9 413 aa13.69□□□□□ -0.22
GFM1-207ENST00000478254 WDR33Q9C0J8 1336 aaKnown RBP13.68□□□□□ -0.22
GFM1-207ENST00000478254 ITSN2Q9NZM3 1697 aa13.68□□□□□ -0.22
GFM1-207ENST00000478254 KIF20AO95235 890 aa13.68□□□□□ -0.22
GFM1-207ENST00000478254 SLC4A2P04920 1241 aa13.68□□□□□ -0.22
GFM1-207ENST00000478254 DNM1Q05193 864 aaKnown RBP13.68□□□□□ -0.22
GFM1-207ENST00000478254 NUTM1Q86Y26 1132 aa13.68□□□□□ -0.22
GFM1-207ENST00000478254 NRBP1Q9UHY1 535 aa13.68□□□□□ -0.22
GFM1-207ENST00000478254 EMILIN1Q9Y6C2 1016 aa13.68□□□□□ -0.22
GFM1-207ENST00000478254 ADCY10Q96PN6 1610 aa13.68□□□□□ -0.22
GFM1-207ENST00000478254 RRS1Q15050 365 aaKnown RBP13.68□□□□□ -0.22
GFM1-207ENST00000478254 HDGFL2Q7Z4V5 671 aaPredicted RBP13.68□□□□□ -0.22
GFM1-207ENST00000478254 FILIP1Q7Z7B0 1213 aa13.68□□□□□ -0.22
GFM1-207ENST00000478254 TFIP11Q9UBB9 837 aaKnown RBP13.68□□□□□ -0.22
GFM1-207ENST00000478254 STAG3Q9UJ98 1225 aa13.68□□□□□ -0.22
GFM1-207ENST00000478254 BRD1O95696 1058 aa13.67□□□□□ -0.22
GFM1-207ENST00000478254 TNNT3P45378 269 aaPredicted RBP13.67□□□□□ -0.22
GFM1-207ENST00000478254 MCM10Q7L590 875 aa13.67□□□□□ -0.22
GFM1-207ENST00000478254 CFAP44Q96MT7 982 aa13.67□□□□□ -0.22
GFM1-207ENST00000478254 DCTPP1Q9H773 170 aa13.67□□□□□ -0.22
GFM1-207ENST00000478254 TERF2IPQ9NYB0 399 aa13.67□□□□□ -0.22
GFM1-207ENST00000478254 CABP1Q9NZU7 370 aa13.67□□□□□ -0.22
GFM1-207ENST00000478254 HMMRO75330 724 aa13.67□□□□□ -0.22
GFM1-207ENST00000478254 PLEKHF1Q96S99 279 aa13.67□□□□□ -0.22
GFM1-207ENST00000478254 NUP160Q12769 1436 aa13.67□□□□□ -0.22
GFM1-207ENST00000478254 ERVK-7P63135 1459 aa13.67□□□□□ -0.22
GFM1-207ENST00000478254 OS9Q13438 667 aaPredicted RBP13.66□□□□□ -0.22
GFM1-207ENST00000478254 ABCC11Q96J66 1382 aa13.66□□□□□ -0.22
GFM1-207ENST00000478254 FYB1O15117 783 aa13.66□□□□□ -0.22
GFM1-207ENST00000478254 PPFIA3O75145 1194 aa13.66□□□□□ -0.22
GFM1-207ENST00000478254 FAM184AQ8NB25 1140 aa13.66□□□□□ -0.22
GFM1-207ENST00000478254 VIRMAQ69YN4 1812 aaKnown RBP13.66□□□□□ -0.22
GFM1-207ENST00000478254 MX1P20591 662 aa13.66□□□□□ -0.22
GFM1-207ENST00000478254 CLEC17AQ6ZS10 378 aa13.66□□□□□ -0.22
GFM1-207ENST00000478254 SPG7Q9UQ90 795 aa13.66□□□□□ -0.22
GFM1-207ENST00000478254 FKBP5Q13451 457 aaPredicted RBP13.65□□□□□ -0.22
GFM1-207ENST00000478254 TCEANC2Q96MN5 208 aa13.65□□□□□ -0.22
GFM1-207ENST00000478254 PDE1AP54750 535 aa13.65□□□□□ -0.22
GFM1-207ENST00000478254 NECAB1Q8N987 351 aa13.65□□□□□ -0.22
GFM1-207ENST00000478254 STK3Q13188 491 aa13.65□□□□□ -0.23
GFM1-207ENST00000478254 BICD2Q8TD16 824 aa13.65□□□□□ -0.23
GFM1-207ENST00000478254 POLR3GO15318 223 aaPredicted RBP13.64□□□□□ -0.23
GFM1-207ENST00000478254 CWC27Q6UX04 472 aaKnown RBP13.64□□□□□ -0.23
GFM1-207ENST00000478254 ST7Q9NRC1 585 aa13.64□□□□□ -0.23
GFM1-207ENST00000478254 ZRANB1Q9UGI0 708 aa13.64□□□□□ -0.23
GFM1-207ENST00000478254 PTPRTO14522 1441 aa13.64□□□□□ -0.23
GFM1-207ENST00000478254 CD109Q6YHK3 1445 aa13.64□□□□□ -0.23
GFM1-207ENST00000478254 CLASP1Q7Z460 1538 aa13.64□□□□□ -0.23
GFM1-207ENST00000478254 CCDC192P0DO97 292 aa13.64□□□□□ -0.23
GFM1-207ENST00000478254 NFE2L2Q16236 605 aa13.64□□□□□ -0.23
GFM1-207ENST00000478254 CEP85Q6P2H3 762 aa13.64□□□□□ -0.23
GFM1-207ENST00000478254 NOS1P29475 1434 aa13.63□□□□□ -0.23
GFM1-207ENST00000478254 STX6O43752 255 aa13.63□□□□□ -0.23
GFM1-207ENST00000478254 GTF3C6Q969F1 213 aa13.63□□□□□ -0.23
GFM1-207ENST00000478254 PRAM1Q96QH2 718 aa13.63□□□□□ -0.23
GFM1-207ENST00000478254 ESYT1Q9BSJ8 1104 aa13.63□□□□□ -0.23
GFM1-207ENST00000478254 KCNF1Q9H3M0 494 aa13.63□□□□□ -0.23
GFM1-207ENST00000478254 A0A087WWV3 80 aa13.62□□□□□ -0.23
GFM1-207ENST00000478254 AP5Z1O43299 807 aa13.62□□□□□ -0.23
GFM1-207ENST00000478254 GTF2F1P35269 517 aaKnown RBP eCLIP13.62□□□□□ -0.23
GFM1-207ENST00000478254 ANKRD44Q8N8A2 993 aa13.62□□□□□ -0.23
GFM1-207ENST00000478254 EIF2AK4Q9P2K8 1649 aaKnown RBP13.62□□□□□ -0.23
GFM1-207ENST00000478254 SYT1P21579 422 aa13.62□□□□□ -0.23
GFM1-207ENST00000478254 KIAA1524Q8TCG1 905 aa13.62□□□□□ -0.23
GFM1-207ENST00000478254 GRIN2AQ12879 1464 aa13.62□□□□□ -0.23
GFM1-207ENST00000478254 CASTP20810 708 aaKnown RBP13.62□□□□□ -0.23
GFM1-207ENST00000478254 SHANK2Q9UPX8 1470 aa13.61□□□□□ -0.23
GFM1-207ENST00000478254 FCHSD2O94868 740 aa13.61□□□□□ -0.23
GFM1-207ENST00000478254 NCBP1Q09161 790 aaKnown RBP13.61□□□□□ -0.23
GFM1-207ENST00000478254 UNC5CLQ8IV45 518 aa13.61□□□□□ -0.23
GFM1-207ENST00000478254 FMNL2Q96PY5 1086 aa13.61□□□□□ -0.23
GFM1-207ENST00000478254 TNMDQ9H2S6 317 aa13.61□□□□□ -0.23
GFM1-207ENST00000478254 OGFRQ9NZT2 677 aa13.61□□□□□ -0.23
GFM1-207ENST00000478254 GOLGA6L19H0YKK7 550 aa13.61□□□□□ -0.23
GFM1-207ENST00000478254 MCM2P49736 904 aa13.61□□□□□ -0.23
GFM1-207ENST00000478254 UBE2HP62256 183 aa13.61□□□□□ -0.23
GFM1-207ENST00000478254 ZSCAN22P10073 491 aaPredicted RBP13.6□□□□□ -0.23
GFM1-207ENST00000478254 ANO6Q4KMQ2 910 aa13.6□□□□□ -0.23
GFM1-207ENST00000478254 GJB2P29033 226 aa13.6□□□□□ -0.23
GFM1-207ENST00000478254 SKIDA1Q1XH10 827 aa13.6□□□□□ -0.23
GFM1-207ENST00000478254 UVSSAQ2YD98 709 aa13.6□□□□□ -0.23
GFM1-207ENST00000478254 RPAP2Q8IXW5 612 aaPredicted RBP13.6□□□□□ -0.23
GFM1-207ENST00000478254 TMX1Q9H3N1 280 aa13.6□□□□□ -0.23
GFM1-207ENST00000478254 CLIP2Q9UDT6 1046 aa13.6□□□□□ -0.23
GFM1-207ENST00000478254 FAM177A1Q8N128 213 aaPredicted RBP13.6□□□□□ -0.23
GFM1-207ENST00000478254 LRRCC1Q9C099 1032 aa13.6□□□□□ -0.23
GFM1-207ENST00000478254 NUP62CLQ9H1M0 184 aa13.6□□□□□ -0.23
GFM1-207ENST00000478254 TMEM51Q9NW97 253 aa13.6□□□□□ -0.23
GFM1-207ENST00000478254 ZNF518AQ6AHZ1 1483 aa13.6□□□□□ -0.23
GFM1-207ENST00000478254 ADAMTS12P58397 1594 aa13.59□□□□□ -0.23
GFM1-207ENST00000478254 BECN2A8MW95 431 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms