RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 QSER1Q2KHR3 1735 aa23.39■■□□□ 1.34
TRIM13-208ENST00000478111 ZCRB1Q8TBF4 217 aaKnown RBP23.39■■□□□ 1.33
TRIM13-208ENST00000478111 PRIM1P49642 420 aaKnown RBP23.38■■□□□ 1.33
TRIM13-208ENST00000478111 AKT1S1Q96B36 256 aa23.38■■□□□ 1.33
TRIM13-208ENST00000478111 NSD2O96028 1365 aa23.38■■□□□ 1.33
TRIM13-208ENST00000478111 SYT17Q9BSW7 474 aa23.37■■□□□ 1.33
TRIM13-208ENST00000478111 FHDC1Q9C0D6 1143 aaPredicted RBP23.37■■□□□ 1.33
TRIM13-208ENST00000478111 TUBGCP6Q96RT7 1819 aa23.37■■□□□ 1.33
TRIM13-208ENST00000478111 DCAF8L1A6NGE4 600 aa23.36■■□□□ 1.33
TRIM13-208ENST00000478111 SLC27A3Q5K4L6 730 aa23.36■■□□□ 1.33
TRIM13-208ENST00000478111 USHBP1Q8N6Y0 703 aa23.35■■□□□ 1.33
TRIM13-208ENST00000478111 CARD14Q9BXL6 1004 aa23.35■■□□□ 1.33
TRIM13-208ENST00000478111 COL24A1Q17RW2 1714 aa23.35■■□□□ 1.33
TRIM13-208ENST00000478111 CDCA8Q53HL2 280 aa23.34■■□□□ 1.33
TRIM13-208ENST00000478111 HSP90AB2PQ58FF8 381 aa23.34■■□□□ 1.33
TRIM13-208ENST00000478111 SYTL4Q96C24 671 aaPredicted RBP23.34■■□□□ 1.33
TRIM13-208ENST00000478111 INSRP06213 1382 aa23.33■■□□□ 1.33
TRIM13-208ENST00000478111 KCNQ4P56696 695 aa23.33■■□□□ 1.33
TRIM13-208ENST00000478111 CGNL1Q0VF96 1302 aa23.32■■□□□ 1.32
TRIM13-208ENST00000478111 GOLGB1Q14789 3259 aaKnown RBP23.31■■□□□ 1.32
TRIM13-208ENST00000478111 ARXQ96QS3 562 aa23.31■■□□□ 1.32
TRIM13-208ENST00000478111 PNPLA7Q6ZV29 1317 aa23.31■■□□□ 1.32
TRIM13-208ENST00000478111 FLT4P35916 1363 aa23.3■■□□□ 1.32
TRIM13-208ENST00000478111 KIF24Q5T7B8 1368 aa23.3■■□□□ 1.32
TRIM13-208ENST00000478111 TIMELESSQ9UNS1 1208 aa23.3■■□□□ 1.32
TRIM13-208ENST00000478111 SMG6Q86US8 1419 aaKnown RBP23.3■■□□□ 1.32
TRIM13-208ENST00000478111 MAP3K5Q99683 1374 aa23.28■■□□□ 1.32
TRIM13-208ENST00000478111 NSD3Q9BZ95 1437 aa23.28■■□□□ 1.32
TRIM13-208ENST00000478111 SLC16A10Q8TF71 515 aa23.28■■□□□ 1.32
TRIM13-208ENST00000478111 RAPGEF4Q8WZA2 1011 aa23.28■■□□□ 1.32
TRIM13-208ENST00000478111 MAP2P11137 1827 aaKnown RBP23.27■■□□□ 1.32
TRIM13-208ENST00000478111 EMILIN1Q9Y6C2 1016 aa23.27■■□□□ 1.32
TRIM13-208ENST00000478111 CHD4Q14839 1912 aa23.27■■□□□ 1.32
TRIM13-208ENST00000478111 ANKRD26Q9UPS8 1709 aa23.27■■□□□ 1.32
TRIM13-208ENST00000478111 TATP17735 454 aaPredicted RBP23.26■■□□□ 1.31
TRIM13-208ENST00000478111 TFCP2L1Q9NZI6 479 aa23.25■■□□□ 1.31
TRIM13-208ENST00000478111 ITGB4P16144 1822 aa23.24■■□□□ 1.31
TRIM13-208ENST00000478111 CCNL1Q9UK58 526 aaPredicted RBP23.24■■□□□ 1.31
TRIM13-208ENST00000478111 PKD1L3Q7Z443 1732 aa23.24■■□□□ 1.31
TRIM13-208ENST00000478111 NCAPD2Q15021 1401 aa23.24■■□□□ 1.31
TRIM13-208ENST00000478111 TOGARAM1Q9Y4F4 1720 aa23.23■■□□□ 1.31
TRIM13-208ENST00000478111 CYP27B1O15528 508 aa23.23■■□□□ 1.31
TRIM13-208ENST00000478111 TAF1LQ8IZX4 1826 aa23.23■■□□□ 1.31
TRIM13-208ENST00000478111 PCDH11XQ9BZA7 1347 aa23.23■■□□□ 1.31
TRIM13-208ENST00000478111 PCDH11YQ9BZA8 1340 aa23.23■■□□□ 1.31
TRIM13-208ENST00000478111 CLSPNQ9HAW4 1339 aa23.22■■□□□ 1.31
TRIM13-208ENST00000478111 C5P01031 1676 aa23.21■■□□□ 1.31
TRIM13-208ENST00000478111 WASHC2AQ641Q2 1341 aa23.19■■□□□ 1.3
TRIM13-208ENST00000478111 POLD1P28340 1107 aa23.18■■□□□ 1.3
TRIM13-208ENST00000478111 COL23A1Q86Y22 540 aaPredicted RBP23.18■■□□□ 1.3
TRIM13-208ENST00000478111 PCGF6Q9BYE7 350 aa23.17■■□□□ 1.3
TRIM13-208ENST00000478111 PPM1GO15355 546 aaPredicted RBP23.16■■□□□ 1.3
TRIM13-208ENST00000478111 MPRIPQ6WCQ1 1025 aa23.16■■□□□ 1.3
TRIM13-208ENST00000478111 POLKQ9UBT6 870 aa23.16■■□□□ 1.3
TRIM13-208ENST00000478111 NKX1-1Q15270 411 aaPredicted RBP23.15■■□□□ 1.3
TRIM13-208ENST00000478111 ZNF784Q8NCA9 323 aaPredicted RBP23.15■■□□□ 1.3
TRIM13-208ENST00000478111 EYA1Q99502 592 aa23.15■■□□□ 1.3
TRIM13-208ENST00000478111 PALLDQ8WX93 1383 aa23.14■■□□□ 1.3
TRIM13-208ENST00000478111 KLHL34Q8N239 644 aa23.12■■□□□ 1.29
TRIM13-208ENST00000478111 NLGN2Q8NFZ4 835 aa23.12■■□□□ 1.29
TRIM13-208ENST00000478111 PIGBQ92521 554 aa23.12■■□□□ 1.29
TRIM13-208ENST00000478111 C4BP0C0L5 1744 aa23.11■■□□□ 1.29
TRIM13-208ENST00000478111 UBR3Q6ZT12 1888 aa23.11■■□□□ 1.29
TRIM13-208ENST00000478111 MSH5O43196 834 aa23.1■■□□□ 1.29
TRIM13-208ENST00000478111 GPR162Q16538 588 aa23.1■■□□□ 1.29
TRIM13-208ENST00000478111 POLR3GLQ9BT43 218 aa23.1■■□□□ 1.29
TRIM13-208ENST00000478111 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.1■■□□□ 1.292e-6■■□□□ 13.2
TRIM13-208ENST00000478111 SPG7Q9UQ90 795 aa23.1■■□□□ 1.29
TRIM13-208ENST00000478111 SMARCC1Q92922 1105 aaPredicted RBP23.09■■□□□ 1.29
TRIM13-208ENST00000478111 EIF4A2Q14240 407 aaKnown RBP23.08■■□□□ 1.29
TRIM13-208ENST00000478111 AMIGO3Q86WK7 504 aa23.08■■□□□ 1.29
TRIM13-208ENST00000478111 HSPA5P11021 654 aaKnown RBP23.07■■□□□ 1.28
TRIM13-208ENST00000478111 MSL1Q68DK7 614 aa23.07■■□□□ 1.28
TRIM13-208ENST00000478111 HMGB2P26583 209 aaKnown RBP23.06■■□□□ 1.28
TRIM13-208ENST00000478111 TNNT2P45379 298 aaPredicted RBP23.06■■□□□ 1.28
TRIM13-208ENST00000478111 EIF4G2P78344 907 aaKnown RBP eCLIP23.06■■□□□ 1.28
TRIM13-208ENST00000478111 FLAD1Q8NFF5 587 aa23.06■■□□□ 1.28
TRIM13-208ENST00000478111 PHKG2P15735 406 aa23.05■■□□□ 1.28
TRIM13-208ENST00000478111 PANK3Q9H999 370 aa23.05■■□□□ 1.28
TRIM13-208ENST00000478111 IFNL2Q8IZJ0 200 aa23.04■■□□□ 1.28
TRIM13-208ENST00000478111 SMIM5Q71RC9 77 aa23.03■■□□□ 1.28
TRIM13-208ENST00000478111 LOC102724428A0A0B4J2F2 783 aa23.02■■□□□ 1.28
TRIM13-208ENST00000478111 YBX3P16989 372 aaKnown RBP eCLIP23.02■■□□□ 1.28
TRIM13-208ENST00000478111 SIK1P57059 783 aa23.02■■□□□ 1.28
TRIM13-208ENST00000478111 PELP1Q8IZL8 1130 aaKnown RBP23.02■■□□□ 1.28
TRIM13-208ENST00000478111 LINC00116Q8NCU8 138 aa23.02■■□□□ 1.28
TRIM13-208ENST00000478111 ASAP1Q9ULH1 1129 aa23.02■■□□□ 1.28
TRIM13-208ENST00000478111 IGSF1Q8N6C5 1336 aa23.02■■□□□ 1.28
TRIM13-208ENST00000478111 AK7Q96M32 723 aa23.01■■□□□ 1.27
TRIM13-208ENST00000478111 TMOD3Q9NYL9 352 aa23.01■■□□□ 1.27
TRIM13-208ENST00000478111 PLEKHG2Q9H7P9 1386 aa23.01■■□□□ 1.27
TRIM13-208ENST00000478111 ITPK1Q13572 414 aa22.99■■□□□ 1.27
TRIM13-208ENST00000478111 CD2APQ9Y5K6 639 aa22.99■■□□□ 1.27
TRIM13-208ENST00000478111 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.98■■□□□ 1.27
TRIM13-208ENST00000478111 ATG3Q9NT62 314 aa22.98■■□□□ 1.27
TRIM13-208ENST00000478111 PHF14O94880 888 aa22.97■■□□□ 1.27
TRIM13-208ENST00000478111 SSFA2P28290 1259 aa22.96■■□□□ 1.27
TRIM13-208ENST00000478111 GRIN3BO60391 1043 aa22.95■■□□□ 1.26
TRIM13-208ENST00000478111 ATP6V1AP38606 617 aa22.95■■□□□ 1.26
TRIM13-208ENST00000478111 ZNF831Q5JPB2 1677 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms