RNA–Protein interactions for RNA: ENST00000478063.2

LMNA-214, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 285 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-214ENST00000478063 LMOD3Q0VAK6 560 aa17.47■□□□□ 0.39
LMNA-214ENST00000478063 PDE3BQ13370 1112 aa17.47■□□□□ 0.39
LMNA-214ENST00000478063 PLEKHO1Q53GL0 409 aaPredicted RBP17.47■□□□□ 0.39
LMNA-214ENST00000478063 FBXO41Q8TF61 875 aa17.47■□□□□ 0.39
LMNA-214ENST00000478063 TRIM35Q9UPQ4 493 aa17.47■□□□□ 0.39
LMNA-214ENST00000478063 SCN11AQ9UI33 1791 aa17.47■□□□□ 0.39
LMNA-214ENST00000478063 LRRC37A3O60309 1634 aa17.47■□□□□ 0.39
LMNA-214ENST00000478063 PHF23Q9BUL5 403 aaPredicted RBP17.46■□□□□ 0.39
LMNA-214ENST00000478063 USP35Q9P2H5 1018 aa17.46■□□□□ 0.39
LMNA-214ENST00000478063 OVOS2A0A0G2JMS6 1433 aa17.46■□□□□ 0.39
LMNA-214ENST00000478063 PLEKHG2Q9H7P9 1386 aa17.45■□□□□ 0.38
LMNA-214ENST00000478063 GOLGA2Q08379 1002 aa17.45■□□□□ 0.38
LMNA-214ENST00000478063 AMOTQ4VCS5 1084 aa17.45■□□□□ 0.38
LMNA-214ENST00000478063 MAP3K5Q99683 1374 aa17.44■□□□□ 0.38
LMNA-214ENST00000478063 ZNF530Q6P9A1 599 aaPredicted RBP17.44■□□□□ 0.38
LMNA-214ENST00000478063 CDCA7LQ96GN5 454 aa17.44■□□□□ 0.38
LMNA-214ENST00000478063 BCL9LQ86UU0 1499 aa17.44■□□□□ 0.38
LMNA-214ENST00000478063 IL2RBP14784 551 aa17.43■□□□□ 0.38
LMNA-214ENST00000478063 UNC5CLQ8IV45 518 aa17.43■□□□□ 0.38
LMNA-214ENST00000478063 WDR63Q8IWG1 891 aa17.43■□□□□ 0.38
LMNA-214ENST00000478063 FNBP4Q8N3X1 1017 aaPredicted RBP17.42■□□□□ 0.38
LMNA-214ENST00000478063 RTF1Q92541 710 aaKnown RBP17.42■□□□□ 0.38
LMNA-214ENST00000478063 SPG7Q9UQ90 795 aa17.42■□□□□ 0.38
LMNA-214ENST00000478063 CCDC9Q9Y3X0 531 aaKnown RBP17.42■□□□□ 0.38
LMNA-214ENST00000478063 SIPA1L3O60292 1781 aaPredicted RBP17.42■□□□□ 0.38
LMNA-214ENST00000478063 ADAMTS7Q9UKP4 1686 aa17.42■□□□□ 0.38
LMNA-214ENST00000478063 GNAT3A8MTJ3 354 aa17.41■□□□□ 0.38
LMNA-214ENST00000478063 C1orf141Q5JVX7 400 aa17.41■□□□□ 0.38
LMNA-214ENST00000478063 THUMPD2Q9BTF0 503 aaKnown RBP17.41■□□□□ 0.38
LMNA-214ENST00000478063 USP21Q9UK80 565 aa17.41■□□□□ 0.38
LMNA-214ENST00000478063 AFF2P51816 1311 aa17.41■□□□□ 0.38
LMNA-214ENST00000478063 SPATA31A1Q5TZJ5 1347 aa17.41■□□□□ 0.38
LMNA-214ENST00000478063 DISP2A7MBM2 1401 aa17.4■□□□□ 0.38
LMNA-214ENST00000478063 KAT6BQ8WYB5 2073 aa17.4■□□□□ 0.38
LMNA-214ENST00000478063 CALD1Q05682 793 aaKnown RBP17.4■□□□□ 0.38
LMNA-214ENST00000478063 SLFN5Q08AF3 891 aa17.4■□□□□ 0.38
LMNA-214ENST00000478063 DCTN1Q14203 1278 aa17.4■□□□□ 0.38
LMNA-214ENST00000478063 MCM10Q7L590 875 aa17.4■□□□□ 0.38
LMNA-214ENST00000478063 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.4■□□□□ 0.38
LMNA-214ENST00000478063 SPATA31A5Q5VU36 1347 aa17.4■□□□□ 0.38
LMNA-214ENST00000478063 SPATA31A7Q8IWB4 1347 aa17.4■□□□□ 0.38
LMNA-214ENST00000478063 E9PSI1 815 aa17.39■□□□□ 0.37
LMNA-214ENST00000478063 AKAP4Q5JQC9 854 aa17.39■□□□□ 0.37
LMNA-214ENST00000478063 SPINK5Q9NQ38 1064 aaPredicted RBP17.39■□□□□ 0.37
LMNA-214ENST00000478063 IL16Q14005 1332 aa17.39■□□□□ 0.37
LMNA-214ENST00000478063 HTATSF1O43719 755 aaKnown RBP17.38■□□□□ 0.37
LMNA-214ENST00000478063 VPS72Q15906 364 aa17.38■□□□□ 0.37
LMNA-214ENST00000478063 ZCRB1Q8TBF4 217 aaKnown RBP17.37■□□□□ 0.37
LMNA-214ENST00000478063 THRAP3Q9Y2W1 955 aaKnown RBP17.37■□□□□ 0.37
LMNA-214ENST00000478063 PCDH11XQ9BZA7 1347 aa17.37■□□□□ 0.37
LMNA-214ENST00000478063 PCDH11YQ9BZA8 1340 aa17.37■□□□□ 0.37
LMNA-214ENST00000478063 GLI3P10071 1580 aa17.36■□□□□ 0.37
LMNA-214ENST00000478063 KDM3BQ7LBC6 1761 aa17.36■□□□□ 0.37
LMNA-214ENST00000478063 ITGB4P16144 1822 aa17.36■□□□□ 0.37
LMNA-214ENST00000478063 MYH16Q9H6N6 1097 aa17.36■□□□□ 0.37
LMNA-214ENST00000478063 LAS1LQ9Y4W2 734 aaKnown RBP17.36■□□□□ 0.37
LMNA-214ENST00000478063 TOGARAM1Q9Y4F4 1720 aa17.35■□□□□ 0.37
LMNA-214ENST00000478063 PHKG2P15735 406 aa17.35■□□□□ 0.37
LMNA-214ENST00000478063 DUSP27Q5VZP5 1158 aa17.35■□□□□ 0.37
LMNA-214ENST00000478063 IFNL2Q8IZJ0 200 aa17.35■□□□□ 0.37
LMNA-214ENST00000478063 CDCA7Q9BWT1 371 aaPredicted RBP17.35■□□□□ 0.37
LMNA-214ENST00000478063 TNS2Q63HR2 1409 aa17.35■□□□□ 0.37
LMNA-214ENST00000478063 THSD7AQ9UPZ6 1657 aa17.35■□□□□ 0.37
LMNA-214ENST00000478063 CYP27B1O15528 508 aa17.34■□□□□ 0.37
LMNA-214ENST00000478063 ATRNO75882 1429 aa17.34■□□□□ 0.37
LMNA-214ENST00000478063 GNAI1P63096 354 aa17.34■□□□□ 0.37
LMNA-214ENST00000478063 MPRIPQ6WCQ1 1025 aa17.34■□□□□ 0.37
LMNA-214ENST00000478063 TRMT2AQ8IZ69 625 aaKnown RBP17.34■□□□□ 0.37
LMNA-214ENST00000478063 IL17REQ8NFR9 667 aa17.34■□□□□ 0.37
LMNA-214ENST00000478063 DOT1LQ8TEK3 1739 aa17.33■□□□□ 0.37
LMNA-214ENST00000478063 KDM6AO15550 1401 aaPredicted RBP17.33■□□□□ 0.36
LMNA-214ENST00000478063 FANCIQ9NVI1 1328 aa17.33■□□□□ 0.36
LMNA-214ENST00000478063 BARGINQ6ZT62 677 aa17.33■□□□□ 0.36
LMNA-214ENST00000478063 TSR2Q969E8 191 aaKnown RBP17.33■□□□□ 0.36
LMNA-214ENST00000478063 IFT57Q9NWB7 429 aa17.33■□□□□ 0.36
LMNA-214ENST00000478063 CEMIPQ8WUJ3 1361 aa17.32■□□□□ 0.36
LMNA-214ENST00000478063 RNMTO43148 476 aaKnown RBP17.32■□□□□ 0.36
LMNA-214ENST00000478063 DDX54Q8TDD1 881 aaKnown RBP17.32■□□□□ 0.36
LMNA-214ENST00000478063 LGR6Q9HBX8 967 aa17.32■□□□□ 0.36
LMNA-214ENST00000478063 TRPC5Q9UL62 973 aaPredicted RBP17.32■□□□□ 0.36
LMNA-214ENST00000478063 HSP90AB1P08238 724 aaKnown RBP17.31■□□□□ 0.36
LMNA-214ENST00000478063 TEFQ10587 303 aa17.31■□□□□ 0.36
LMNA-214ENST00000478063 FAM98CQ17RN3 349 aaKnown RBP17.31■□□□□ 0.36
LMNA-214ENST00000478063 CFAP44Q96MT7 982 aa17.31■□□□□ 0.36
LMNA-214ENST00000478063 MRC1P22897 1456 aa17.31■□□□□ 0.36
LMNA-214ENST00000478063 EXOC5O00471 708 aa17.3■□□□□ 0.36
LMNA-214ENST00000478063 ZNF853P0CG23 659 aa17.3■□□□□ 0.36
LMNA-214ENST00000478063 MBIPQ9NS73 344 aa17.3■□□□□ 0.36
LMNA-214ENST00000478063 BRWD3Q6RI45 1802 aa17.3■□□□□ 0.36
LMNA-214ENST00000478063 A0A0G2JS52 829 aa17.29■□□□□ 0.36
LMNA-214ENST00000478063 MYT1Q01538 1121 aa17.29■□□□□ 0.36
LMNA-214ENST00000478063 DDB1Q16531 1140 aa17.29■□□□□ 0.36
LMNA-214ENST00000478063 DCAF5Q96JK2 942 aa17.29■□□□□ 0.36
LMNA-214ENST00000478063 GJD4Q96KN9 370 aaPredicted RBP17.29■□□□□ 0.36
LMNA-214ENST00000478063 TAF7Q15545 349 aaPredicted RBP17.28■□□□□ 0.36
LMNA-214ENST00000478063 CHL1O00533 1208 aa17.27■□□□□ 0.36
LMNA-214ENST00000478063 QTRT2Q9H974 415 aaKnown RBP17.27■□□□□ 0.36
LMNA-214ENST00000478063 TSPYL4Q9UJ04 414 aa17.27■□□□□ 0.36
LMNA-214ENST00000478063 PAPPAQ13219 1627 aa17.27■□□□□ 0.36
LMNA-214ENST00000478063 EXOSC9Q06265 439 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms