RNA–Protein interactions for RNA: ENST00000477905.1

LRRC42-205, Transcript of leucine rich repeat containing 42, humanhuman

TSL 2

Gene LRRC42, Length 611 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-205ENST00000477905 SLC15A2Q16348 729 aa18.49■□□□□ 0.55
LRRC42-205ENST00000477905 SPON1Q9HCB6 807 aa18.49■□□□□ 0.55
LRRC42-205ENST00000477905 CCER1Q8TC90 406 aaPredicted RBP18.48■□□□□ 0.55
LRRC42-205ENST00000477905 LTV1Q96GA3 475 aaPredicted RBP18.48■□□□□ 0.55
LRRC42-205ENST00000477905 SLC27A3Q5K4L6 730 aa18.47■□□□□ 0.55
LRRC42-205ENST00000477905 POLKQ9UBT6 870 aa18.46■□□□□ 0.55
LRRC42-205ENST00000477905 EMILIN1Q9Y6C2 1016 aa18.46■□□□□ 0.55
LRRC42-205ENST00000477905 LY75O60449 1722 aa18.46■□□□□ 0.55
LRRC42-205ENST00000477905 QSER1Q2KHR3 1735 aa18.46■□□□□ 0.55
LRRC42-205ENST00000477905 PKD1L3Q7Z443 1732 aa18.46■□□□□ 0.55
LRRC42-205ENST00000477905 ACSBG1Q96GR2 724 aa18.45■□□□□ 0.54
LRRC42-205ENST00000477905 LRRC4BQ9NT99 713 aa18.45■□□□□ 0.54
LRRC42-205ENST00000477905 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.45■□□□□ 0.54
LRRC42-205ENST00000477905 NKX1-1Q15270 411 aaPredicted RBP18.44■□□□□ 0.54
LRRC42-205ENST00000477905 DDX54Q8TDD1 881 aaKnown RBP18.44■□□□□ 0.54
LRRC42-205ENST00000477905 RAPGEF4Q8WZA2 1011 aa18.44■□□□□ 0.54
LRRC42-205ENST00000477905 SGIP1Q9BQI5 828 aa18.44■□□□□ 0.54
LRRC42-205ENST00000477905 MAP2P11137 1827 aaKnown RBP18.44■□□□□ 0.54
LRRC42-205ENST00000477905 PTGER2P43116 358 aa18.43■□□□□ 0.54
LRRC42-205ENST00000477905 AKT1S1Q96B36 256 aa18.43■□□□□ 0.54
LRRC42-205ENST00000477905 STK32BQ9NY57 414 aa18.43■□□□□ 0.54
LRRC42-205ENST00000477905 COL24A1Q17RW2 1714 aa18.43■□□□□ 0.54
LRRC42-205ENST00000477905 DOT1LQ8TEK3 1739 aa18.43■□□□□ 0.54
LRRC42-205ENST00000477905 PCDH11XQ9BZA7 1347 aa18.42■□□□□ 0.54
LRRC42-205ENST00000477905 PCDH11YQ9BZA8 1340 aa18.42■□□□□ 0.54
LRRC42-205ENST00000477905 TATP17735 454 aaPredicted RBP18.41■□□□□ 0.54
LRRC42-205ENST00000477905 PRIM1P49642 420 aaKnown RBP18.41■□□□□ 0.54
LRRC42-205ENST00000477905 PDGFDQ9GZP0 370 aaPredicted RBP18.41■□□□□ 0.54
LRRC42-205ENST00000477905 CYP27B1O15528 508 aa18.4■□□□□ 0.54
LRRC42-205ENST00000477905 MTFR1LQ9H019 292 aa18.4■□□□□ 0.54
LRRC42-205ENST00000477905 PANK3Q9H999 370 aa18.4■□□□□ 0.54
LRRC42-205ENST00000477905 HMGB2P26583 209 aaKnown RBP18.39■□□□□ 0.53
LRRC42-205ENST00000477905 SLC16A10Q8TF71 515 aa18.39■□□□□ 0.53
LRRC42-205ENST00000477905 EYA1Q99502 592 aa18.39■□□□□ 0.53
LRRC42-205ENST00000477905 USHBP1Q8N6Y0 703 aa18.38■□□□□ 0.53
LRRC42-205ENST00000477905 MAP3K5Q99683 1374 aa18.38■□□□□ 0.53
LRRC42-205ENST00000477905 ZNF827Q17R98 1081 aa18.37■□□□□ 0.53
LRRC42-205ENST00000477905 IGSF1Q8N6C5 1336 aa18.36■□□□□ 0.53
LRRC42-205ENST00000477905 KAT6BQ8WYB5 2073 aa18.36■□□□□ 0.53
LRRC42-205ENST00000477905 EIF4A2Q14240 407 aaKnown RBP18.35■□□□□ 0.53
LRRC42-205ENST00000477905 TOGARAM1Q9Y4F4 1720 aa18.35■□□□□ 0.53
LRRC42-205ENST00000477905 PER1O15534 1290 aaPredicted RBP18.34■□□□□ 0.53
LRRC42-205ENST00000477905 AMER1Q5JTC6 1135 aaPredicted RBP18.34■□□□□ 0.53
LRRC42-205ENST00000477905 SPG7Q9UQ90 795 aa18.33■□□□□ 0.52
LRRC42-205ENST00000477905 KIF7Q2M1P5 1343 aa18.32■□□□□ 0.52
LRRC42-205ENST00000477905 PNPLA7Q6ZV29 1317 aa18.32■□□□□ 0.52
LRRC42-205ENST00000477905 ZBTB7AO95365 584 aa18.32■□□□□ 0.52
LRRC42-205ENST00000477905 KDRP35968 1356 aa18.31■□□□□ 0.52
LRRC42-205ENST00000477905 NPC1L1Q9UHC9 1359 aa18.31■□□□□ 0.52
LRRC42-205ENST00000477905 ITGB4P16144 1822 aa18.31■□□□□ 0.52
LRRC42-205ENST00000477905 SYTL4Q96C24 671 aaPredicted RBP18.3■□□□□ 0.52
LRRC42-205ENST00000477905 TUBGCP6Q96RT7 1819 aa18.3■□□□□ 0.52
LRRC42-205ENST00000477905 PPM1GO15355 546 aaPredicted RBP18.29■□□□□ 0.52
LRRC42-205ENST00000477905 PHKG2P15735 406 aa18.29■□□□□ 0.52
LRRC42-205ENST00000477905 SMARCC1Q92922 1105 aaPredicted RBP18.29■□□□□ 0.52
LRRC42-205ENST00000477905 PPP1R1BQ9UD71 204 aaPredicted RBP18.29■□□□□ 0.52
LRRC42-205ENST00000477905 CCNL1Q9UK58 526 aaPredicted RBP18.29■□□□□ 0.52
LRRC42-205ENST00000477905 KNSTRNQ9Y448 316 aa18.29■□□□□ 0.52
LRRC42-205ENST00000477905 PALLDQ8WX93 1383 aa18.29■□□□□ 0.52
LRRC42-205ENST00000477905 TAF1LQ8IZX4 1826 aa18.28■□□□□ 0.52
LRRC42-205ENST00000477905 IFNL2Q8IZJ0 200 aa18.28■□□□□ 0.52
LRRC42-205ENST00000477905 ZNF831Q5JPB2 1677 aa18.28■□□□□ 0.52
LRRC42-205ENST00000477905 PIGBQ92521 554 aa18.27■□□□□ 0.52
LRRC42-205ENST00000477905 SYT17Q9BSW7 474 aa18.27■□□□□ 0.52
LRRC42-205ENST00000477905 ATF5Q9Y2D1 282 aaPredicted RBP18.27■□□□□ 0.52
LRRC42-205ENST00000477905 C5P01031 1676 aa18.27■□□□□ 0.52
LRRC42-205ENST00000477905 MORC1Q86VD1 984 aa18.25■□□□□ 0.51
LRRC42-205ENST00000477905 POLR3GLQ9BT43 218 aa18.25■□□□□ 0.51
LRRC42-205ENST00000477905 ERVV-2B6SEH9 535 aa18.24■□□□□ 0.51
LRRC42-205ENST00000477905 IL13P35225 146 aa18.24■□□□□ 0.51
LRRC42-205ENST00000477905 AMOTQ4VCS5 1084 aa18.24■□□□□ 0.51
LRRC42-205ENST00000477905 FLAD1Q8NFF5 587 aa18.24■□□□□ 0.51
LRRC42-205ENST00000477905 ARXQ96QS3 562 aa18.24■□□□□ 0.51
LRRC42-205ENST00000477905 FHDC1Q9C0D6 1143 aaPredicted RBP18.24■□□□□ 0.51
LRRC42-205ENST00000477905 TFCP2L1Q9NZI6 479 aa18.24■□□□□ 0.51
LRRC42-205ENST00000477905 KCNQ4P56696 695 aa18.23■□□□□ 0.51
LRRC42-205ENST00000477905 MPRIPQ6WCQ1 1025 aa18.23■□□□□ 0.51
LRRC42-205ENST00000477905 HSP90AB1P08238 724 aaKnown RBP18.22■□□□□ 0.51
LRRC42-205ENST00000477905 TNNT2P45379 298 aaPredicted RBP18.22■□□□□ 0.51
LRRC42-205ENST00000477905 DCAF5Q96JK2 942 aa18.22■□□□□ 0.51
LRRC42-205ENST00000477905 C4BP0C0L5 1744 aa18.21■□□□□ 0.51
LRRC42-205ENST00000477905 COL23A1Q86Y22 540 aaPredicted RBP18.21■□□□□ 0.51
LRRC42-205ENST00000477905 UTRNP46939 3433 aa18.2■□□□□ 0.5
LRRC42-205ENST00000477905 PLEKHO1Q53GL0 409 aaPredicted RBP18.2■□□□□ 0.5
LRRC42-205ENST00000477905 KDM6AO15550 1401 aaPredicted RBP18.2■□□□□ 0.5
LRRC42-205ENST00000477905 UBR3Q6ZT12 1888 aa18.2■□□□□ 0.5
LRRC42-205ENST00000477905 LOC102724428A0A0B4J2F2 783 aa18.19■□□□□ 0.5
LRRC42-205ENST00000477905 SIK1P57059 783 aa18.19■□□□□ 0.5
LRRC42-205ENST00000477905 TMOD3Q9NYL9 352 aa18.19■□□□□ 0.5
LRRC42-205ENST00000477905 CICQ96RK0 1608 aaPredicted RBP18.19■□□□□ 0.5
LRRC42-205ENST00000477905 ATG3Q9NT62 314 aa18.18■□□□□ 0.5
LRRC42-205ENST00000477905 SSFA2P28290 1259 aa18.17■□□□□ 0.5
LRRC42-205ENST00000477905 POLD1P28340 1107 aa18.17■□□□□ 0.5
LRRC42-205ENST00000477905 ASAP1Q9ULH1 1129 aa18.17■□□□□ 0.5
LRRC42-205ENST00000477905 ADAMTS7Q9UKP4 1686 aa18.16■□□□□ 0.5
LRRC42-205ENST00000477905 DCAF8L1A6NGE4 600 aa18.16■□□□□ 0.5
LRRC42-205ENST00000477905 MTHFSP49914 203 aa18.16■□□□□ 0.5
LRRC42-205ENST00000477905 AEBP1Q8IUX7 1158 aa18.16■□□□□ 0.5
LRRC42-205ENST00000477905 COL3A1P02461 1466 aaPredicted RBP18.15■□□□□ 0.5
LRRC42-205ENST00000477905 ITPK1Q13572 414 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms