RNA–Protein interactions for RNA: ENST00000477692.6

EXOSC1-209, Transcript of exosome component 1, humanhuman

TSL 5

Gene EXOSC1, Length 480 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-209ENST00000477692 PLEKHG2Q9H7P9 1386 aa17.7■□□□□ 0.42
EXOSC1-209ENST00000477692 NUDCQ9Y266 331 aa17.7■□□□□ 0.42
EXOSC1-209ENST00000477692 U2SURPO15042 1029 aaKnown RBP17.69■□□□□ 0.42
EXOSC1-209ENST00000477692 ZCRB1Q8TBF4 217 aaKnown RBP17.68■□□□□ 0.42
EXOSC1-209ENST00000477692 HMOX1P09601 288 aa17.67■□□□□ 0.42
EXOSC1-209ENST00000477692 MARCH10Q8NA82 808 aaPredicted RBP17.67■□□□□ 0.42
EXOSC1-209ENST00000477692 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.66■□□□□ 0.42
EXOSC1-209ENST00000477692 U2AF1L5P0DN76 240 aaPredicted RBP17.65■□□□□ 0.42
EXOSC1-209ENST00000477692 U2AF1Q01081 240 aaKnown RBP eCLIP17.65■□□□□ 0.42
EXOSC1-209ENST00000477692 FAM182BQ5T319 152 aa17.65■□□□□ 0.42
EXOSC1-209ENST00000477692 SBF2Q86WG5 1849 aa17.64■□□□□ 0.41
EXOSC1-209ENST00000477692 SPG7Q9UQ90 795 aa17.64■□□□□ 0.41
EXOSC1-209ENST00000477692 BCL9O00512 1426 aa17.64■□□□□ 0.41
EXOSC1-209ENST00000477692 DIEXFQ68CQ4 756 aaKnown RBP17.63■□□□□ 0.41
EXOSC1-209ENST00000477692 FAM196AQ6ZSG2 479 aa17.63■□□□□ 0.41
EXOSC1-209ENST00000477692 DDX54Q8TDD1 881 aaKnown RBP17.63■□□□□ 0.41
EXOSC1-209ENST00000477692 RSPH6AQ9H0K4 717 aa17.63■□□□□ 0.41
EXOSC1-209ENST00000477692 PCDH11XQ9BZA7 1347 aa17.63■□□□□ 0.41
EXOSC1-209ENST00000477692 PCDH11YQ9BZA8 1340 aa17.63■□□□□ 0.41
EXOSC1-209ENST00000477692 AMOTQ4VCS5 1084 aa17.62■□□□□ 0.41
EXOSC1-209ENST00000477692 CCDC184Q52MB2 194 aa17.62■□□□□ 0.41
EXOSC1-209ENST00000477692 PLEKHO1Q53GL0 409 aaPredicted RBP17.62■□□□□ 0.41
EXOSC1-209ENST00000477692 CYP27B1O15528 508 aa17.61■□□□□ 0.41
EXOSC1-209ENST00000477692 FCHSD2O94868 740 aa17.61■□□□□ 0.41
EXOSC1-209ENST00000477692 EP400Q96L91 3159 aa17.6■□□□□ 0.41
EXOSC1-209ENST00000477692 PRKAR2BP31323 418 aa17.6■□□□□ 0.41
EXOSC1-209ENST00000477692 DOT1LQ8TEK3 1739 aa17.59■□□□□ 0.41
EXOSC1-209ENST00000477692 TNS1Q9HBL0 1735 aaKnown RBP17.58■□□□□ 0.41
EXOSC1-209ENST00000477692 NHSQ6T4R5 1651 aa17.58■□□□□ 0.41
EXOSC1-209ENST00000477692 PHKG2P15735 406 aa17.58■□□□□ 0.4
EXOSC1-209ENST00000477692 IFNL2Q8IZJ0 200 aa17.58■□□□□ 0.4
EXOSC1-209ENST00000477692 TOGARAM1Q9Y4F4 1720 aa17.58■□□□□ 0.4
EXOSC1-209ENST00000477692 WDR43Q15061 677 aaKnown RBP eCLIP17.57■□□□□ 0.4
EXOSC1-209ENST00000477692 NKX1-1Q15270 411 aaPredicted RBP17.57■□□□□ 0.4
EXOSC1-209ENST00000477692 MTHFSDQ2M296 383 aaKnown RBP17.57■□□□□ 0.4
EXOSC1-209ENST00000477692 ZNF530Q6P9A1 599 aaPredicted RBP17.57■□□□□ 0.4
EXOSC1-209ENST00000477692 UPF1Q92900 1129 aaKnown RBP eCLIP17.57■□□□□ 0.4
EXOSC1-209ENST00000477692 PHACTR3Q96KR7 559 aa17.57■□□□□ 0.4
EXOSC1-209ENST00000477692 MRS2Q9HD23 443 aa17.57■□□□□ 0.4
EXOSC1-209ENST00000477692 SOCS7O14512 581 aa17.56■□□□□ 0.4
EXOSC1-209ENST00000477692 PLEKHF1Q96S99 279 aa17.56■□□□□ 0.4
EXOSC1-209ENST00000477692 VIRMAQ69YN4 1812 aaKnown RBP17.56■□□□□ 0.4
EXOSC1-209ENST00000477692 PNNQ9H307 717 aaKnown RBP17.55■□□□□ 0.4
EXOSC1-209ENST00000477692 ADAMTS8Q9UP79 889 aa17.55■□□□□ 0.4
EXOSC1-209ENST00000477692 ITGB4P16144 1822 aa17.54■□□□□ 0.4
EXOSC1-209ENST00000477692 SCN11AQ9UI33 1791 aa17.54■□□□□ 0.4
EXOSC1-209ENST00000477692 TRIM37O94972 964 aa17.54■□□□□ 0.4
EXOSC1-209ENST00000477692 AKAP4Q5JQC9 854 aa17.54■□□□□ 0.4
EXOSC1-209ENST00000477692 CCDC125Q86Z20 511 aa17.54■□□□□ 0.4
EXOSC1-209ENST00000477692 GAS2L2Q8NHY3 880 aa17.54■□□□□ 0.4
EXOSC1-209ENST00000477692 PNISRQ8TF01 805 aaKnown RBP17.54■□□□□ 0.4
EXOSC1-209ENST00000477692 KAT6BQ8WYB5 2073 aa17.53■□□□□ 0.4
EXOSC1-209ENST00000477692 ADAMTS7Q9UKP4 1686 aa17.53■□□□□ 0.4
EXOSC1-209ENST00000477692 HSP90AB1P08238 724 aaKnown RBP17.53■□□□□ 0.4
EXOSC1-209ENST00000477692 C1orf141Q5JVX7 400 aa17.53■□□□□ 0.4
EXOSC1-209ENST00000477692 ACSBG1Q96GR2 724 aa17.53■□□□□ 0.4
EXOSC1-209ENST00000477692 DLG5Q8TDM6 1919 aa17.53■□□□□ 0.4
EXOSC1-209ENST00000477692 BTAF1O14981 1849 aa17.52■□□□□ 0.4
EXOSC1-209ENST00000477692 KCNQ2O43526 872 aa17.52■□□□□ 0.4
EXOSC1-209ENST00000477692 BCL11BQ9C0K0 894 aaPredicted RBP17.52■□□□□ 0.4
EXOSC1-209ENST00000477692 KDM6AO15550 1401 aaPredicted RBP17.52■□□□□ 0.4
EXOSC1-209ENST00000477692 CCER2I3L3R5 266 aa17.51■□□□□ 0.39
EXOSC1-209ENST00000477692 NEFMP07197 916 aa17.51■□□□□ 0.39
EXOSC1-209ENST00000477692 PTF1AQ7RTS3 328 aa17.51■□□□□ 0.39
EXOSC1-209ENST00000477692 DCAF5Q96JK2 942 aa17.51■□□□□ 0.39
EXOSC1-209ENST00000477692 MAPK8IP3Q9UPT6 1336 aa17.5■□□□□ 0.39
EXOSC1-209ENST00000477692 PRIM1P49642 420 aaKnown RBP17.5■□□□□ 0.39
EXOSC1-209ENST00000477692 MPRIPQ6WCQ1 1025 aa17.5■□□□□ 0.39
EXOSC1-209ENST00000477692 MAP3K5Q99683 1374 aa17.5■□□□□ 0.39
EXOSC1-209ENST00000477692 SF3B2Q13435 895 aaKnown RBP17.49■□□□□ 0.39
EXOSC1-209ENST00000477692 CCDC146Q8IYE0 955 aa17.49■□□□□ 0.39
EXOSC1-209ENST00000477692 MIER1Q8N108 512 aa17.49■□□□□ 0.39
EXOSC1-209ENST00000477692 RUNDC1Q96C34 613 aa17.49■□□□□ 0.39
EXOSC1-209ENST00000477692 RGPD3A6NKT7 1758 aaPredicted RBP17.48■□□□□ 0.39
EXOSC1-209ENST00000477692 RGPD4Q7Z3J3 1758 aa17.48■□□□□ 0.39
EXOSC1-209ENST00000477692 GNAT3A8MTJ3 354 aa17.48■□□□□ 0.39
EXOSC1-209ENST00000477692 SYTL4Q96C24 671 aaPredicted RBP17.48■□□□□ 0.39
EXOSC1-209ENST00000477692 ERVV-2B6SEH9 535 aa17.47■□□□□ 0.39
EXOSC1-209ENST00000477692 NFE2L2Q16236 605 aa17.47■□□□□ 0.39
EXOSC1-209ENST00000477692 LGR6Q9HBX8 967 aa17.47■□□□□ 0.39
EXOSC1-209ENST00000477692 MRC1P22897 1456 aa17.46■□□□□ 0.39
EXOSC1-209ENST00000477692 RNMTO43148 476 aaKnown RBP17.46■□□□□ 0.39
EXOSC1-209ENST00000477692 APBA3O96018 575 aa17.46■□□□□ 0.39
EXOSC1-209ENST00000477692 SIPA1L3O60292 1781 aaPredicted RBP17.45■□□□□ 0.38
EXOSC1-209ENST00000477692 HTATSF1O43719 755 aaKnown RBP17.45■□□□□ 0.38
EXOSC1-209ENST00000477692 BAG6P46379 1132 aa17.45■□□□□ 0.38
EXOSC1-209ENST00000477692 DEFB132Q7Z7B7 95 aa17.44■□□□□ 0.38
EXOSC1-209ENST00000477692 IL17REQ8NFR9 667 aa17.44■□□□□ 0.38
EXOSC1-209ENST00000477692 PIGBQ92521 554 aa17.44■□□□□ 0.38
EXOSC1-209ENST00000477692 TMOD3Q9NYL9 352 aa17.44■□□□□ 0.38
EXOSC1-209ENST00000477692 LY75O60449 1722 aa17.44■□□□□ 0.38
EXOSC1-209ENST00000477692 CEMIPQ8WUJ3 1361 aa17.43■□□□□ 0.38
EXOSC1-209ENST00000477692 RREB1Q92766 1687 aa17.43■□□□□ 0.38
EXOSC1-209ENST00000477692 PLSCR1O15162 318 aa17.43■□□□□ 0.38
EXOSC1-209ENST00000477692 TMPOP42166 694 aaKnown RBP17.43■□□□□ 0.38
EXOSC1-209ENST00000477692 CABP4P57796 275 aa17.43■□□□□ 0.38
EXOSC1-209ENST00000477692 FAM9BQ8IZU0 186 aa17.43■□□□□ 0.38
EXOSC1-209ENST00000477692 RIPK4P57078 832 aa17.42■□□□□ 0.38
EXOSC1-209ENST00000477692 EN1Q05925 392 aaPredicted RBP17.42■□□□□ 0.38
EXOSC1-209ENST00000477692 NFATC2IPQ8NCF5 419 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms