RNA–Protein interactions for RNA: ENST00000477558.1

VPS45-207, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,425 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-207ENST00000477558 UACAQ9BZF9 1416 aa8.56□□□□□ -1.04
VPS45-207ENST00000477558 ARID3CA6NKF2 412 aa8.55□□□□□ -1.04
VPS45-207ENST00000477558 WNT7AO00755 349 aa8.55□□□□□ -1.04
VPS45-207ENST00000477558 VARSP26640 1264 aaKnown RBP8.55□□□□□ -1.04
VPS45-207ENST00000477558 ADAMTS19Q8TE59 1207 aa8.55□□□□□ -1.04
VPS45-207ENST00000477558 C1QTNF2Q9BXJ5 285 aa8.55□□□□□ -1.04
VPS45-207ENST00000477558 ARHGAP35Q9NRY4 1499 aa8.55□□□□□ -1.04
VPS45-207ENST00000477558 KIF13AQ9H1H9 1805 aa8.54□□□□□ -1.04
VPS45-207ENST00000477558 POTECB2RU33 542 aa8.54□□□□□ -1.04
VPS45-207ENST00000477558 SIAH2O43255 324 aa8.54□□□□□ -1.04
VPS45-207ENST00000477558 PCDHB9Q9Y5E1 797 aa8.54□□□□□ -1.04
VPS45-207ENST00000477558 PLB1Q6P1J6 1458 aa8.54□□□□□ -1.04
VPS45-207ENST00000477558 ZCCHC11Q5TAX3 1644 aaKnown RBP8.54□□□□□ -1.04
VPS45-207ENST00000477558 TNFRSF10AO00220 468 aa8.54□□□□□ -1.04
VPS45-207ENST00000477558 HDGFL1Q5TGJ6 251 aa8.54□□□□□ -1.04
VPS45-207ENST00000477558 EIF4G2P78344 907 aaKnown RBP eCLIP8.53□□□□□ -1.04
VPS45-207ENST00000477558 DZIP3Q86Y13 1208 aaKnown RBP8.53□□□□□ -1.04
VPS45-207ENST00000477558 FAM174AQ8TBP5 190 aa8.53□□□□□ -1.04
VPS45-207ENST00000477558 ALG2Q9H553 416 aa8.53□□□□□ -1.04
VPS45-207ENST00000477558 RAPGEF6Q8TEU7 1601 aa8.52□□□□□ -1.05
VPS45-207ENST00000477558 FHOD3Q2V2M9 1422 aa8.52□□□□□ -1.05
VPS45-207ENST00000477558 DIP2BQ9P265 1576 aa8.52□□□□□ -1.05
VPS45-207ENST00000477558 ARID5BQ14865 1188 aa8.52□□□□□ -1.05
VPS45-207ENST00000477558 TLL2Q9Y6L7 1015 aa8.52□□□□□ -1.05
VPS45-207ENST00000477558 SEMA3FQ13275 785 aa8.51□□□□□ -1.05
VPS45-207ENST00000477558 TRMT44Q8IYL2 757 aaKnown RBP8.51□□□□□ -1.05
VPS45-207ENST00000477558 C1orf115Q9H7X2 142 aa8.51□□□□□ -1.05
VPS45-207ENST00000477558 GLMNQ92990 594 aa8.5□□□□□ -1.05
VPS45-207ENST00000477558 SLC10A4Q96EP9 437 aa8.5□□□□□ -1.05
VPS45-207ENST00000477558 NUP153P49790 1475 aaKnown RBP8.5□□□□□ -1.05
VPS45-207ENST00000477558 ABCC10Q5T3U5 1492 aa8.5□□□□□ -1.05
VPS45-207ENST00000477558 CDK15Q96Q40 435 aa8.49□□□□□ -1.05
VPS45-207ENST00000477558 AAASQ9NRG9 546 aa8.49□□□□□ -1.05
VPS45-207ENST00000477558 CEP126Q9P2H0 1117 aa8.49□□□□□ -1.05
VPS45-207ENST00000477558 GLI2P10070 1586 aa8.49□□□□□ -1.05
VPS45-207ENST00000477558 ST8SIA5O15466 376 aa8.48□□□□□ -1.05
VPS45-207ENST00000477558 GIGYF1O75420 1035 aaPredicted RBP8.48□□□□□ -1.05
VPS45-207ENST00000477558 GRM5P41594 1212 aa8.48□□□□□ -1.05
VPS45-207ENST00000477558 VASH1Q7L8A9 365 aaPredicted RBP8.48□□□□□ -1.05
VPS45-207ENST00000477558 SNIP1Q8TAD8 396 aaKnown RBP8.48□□□□□ -1.05
VPS45-207ENST00000477558 CALR3Q96L12 384 aaKnown RBP8.48□□□□□ -1.05
VPS45-207ENST00000477558 LRRIQ1Q96JM4 1722 aa8.48□□□□□ -1.05
VPS45-207ENST00000477558 J3QL48 77 aa8.47□□□□□ -1.05
VPS45-207ENST00000477558 ALDH1A1P00352 501 aa8.47□□□□□ -1.05
VPS45-207ENST00000477558 SOX11P35716 441 aa8.47□□□□□ -1.05
VPS45-207ENST00000477558 TREML4Q6UXN2 200 aa8.47□□□□□ -1.05
VPS45-207ENST00000477558 KCTD15Q96SI1 283 aaPredicted RBP8.47□□□□□ -1.05
VPS45-207ENST00000477558 TOR4AQ9NXH8 423 aa8.47□□□□□ -1.05
VPS45-207ENST00000477558 FMN1Q68DA7 1419 aa8.47□□□□□ -1.05
VPS45-207ENST00000477558 ASXL2Q76L83 1435 aa8.47□□□□□ -1.05
VPS45-207ENST00000477558 MCCD1P59942 119 aaPredicted RBP8.46□□□□□ -1.05
VPS45-207ENST00000477558 TSGA10IPQ3SY00 556 aa8.46□□□□□ -1.05
VPS45-207ENST00000477558 CYP4X1Q8N118 509 aa8.46□□□□□ -1.05
VPS45-207ENST00000477558 MPNDQ8N594 471 aa8.46□□□□□ -1.05
VPS45-207ENST00000477558 ATP10BO94823 1461 aa8.46□□□□□ -1.05
VPS45-207ENST00000477558 WDR7Q9Y4E6 1490 aa8.46□□□□□ -1.05
VPS45-207ENST00000477558 PCF11O94913 1555 aaKnown RBP8.46□□□□□ -1.06
VPS45-207ENST00000477558 HECW1Q76N89 1606 aa8.46□□□□□ -1.06
VPS45-207ENST00000477558 MAP3K4Q9Y6R4 1608 aa8.46□□□□□ -1.06
VPS45-207ENST00000477558 PPRC1Q5VV67 1664 aaKnown RBP8.46□□□□□ -1.06
VPS45-207ENST00000477558 TTC24A2A3L6 582 aaPredicted RBP8.46□□□□□ -1.06
VPS45-207ENST00000477558 PIK3CDO00329 1044 aa8.46□□□□□ -1.06
VPS45-207ENST00000477558 RAB15P59190 212 aa8.46□□□□□ -1.06
VPS45-207ENST00000477558 LCE2AQ5TA79 106 aaPredicted RBP8.46□□□□□ -1.06
VPS45-207ENST00000477558 CRIPAKQ8N1N5 446 aa8.46□□□□□ -1.06
VPS45-207ENST00000477558 PHTF2Q8N3S3 785 aa8.46□□□□□ -1.06
VPS45-207ENST00000477558 MAP4K5Q9Y4K4 846 aa8.46□□□□□ -1.06
VPS45-207ENST00000477558 CLIP1P30622 1438 aa8.45□□□□□ -1.06
VPS45-207ENST00000477558 ADH1CP00326 375 aa8.45□□□□□ -1.06
VPS45-207ENST00000477558 CEP162Q5TB80 1403 aa8.45□□□□□ -1.06
VPS45-207ENST00000477558 EPRSP07814 1512 aaKnown RBP8.45□□□□□ -1.06
VPS45-207ENST00000477558 FYCO1Q9BQS8 1478 aa8.44□□□□□ -1.06
VPS45-207ENST00000477558 ESPNB1AK53 854 aa8.44□□□□□ -1.06
VPS45-207ENST00000477558 NR3C2P08235 984 aa8.44□□□□□ -1.06
VPS45-207ENST00000477558 SMPD1P17405 629 aa8.44□□□□□ -1.06
VPS45-207ENST00000477558 FSHRP23945 695 aa8.44□□□□□ -1.06
VPS45-207ENST00000477558 UCN2Q96RP3 112 aa8.44□□□□□ -1.06
VPS45-207ENST00000477558 CDV3Q9UKY7 258 aaKnown RBP8.44□□□□□ -1.06
VPS45-207ENST00000477558 CASKIN1Q8WXD9 1431 aa8.43□□□□□ -1.06
VPS45-207ENST00000477558 NBPF20Q3BBV1 942 aa8.43□□□□□ -1.06
VPS45-207ENST00000477558 INTS6LQ5JSJ4 861 aaKnown RBP8.43□□□□□ -1.06
VPS45-207ENST00000477558 CFAP43Q8NDM7 1665 aa8.42□□□□□ -1.06
VPS45-207ENST00000477558 ABCA9Q8IUA7 1624 aa8.42□□□□□ -1.06
VPS45-207ENST00000477558 AVPP01185 164 aa8.42□□□□□ -1.06
VPS45-207ENST00000477558 SLFNL1Q499Z3 407 aa8.42□□□□□ -1.06
VPS45-207ENST00000477558 TBC1D9Q6ZT07 1266 aa8.42□□□□□ -1.06
VPS45-207ENST00000477558 ZNF592Q92610 1267 aa8.42□□□□□ -1.06
VPS45-207ENST00000477558 CCDC85AQ96PX6 553 aaPredicted RBP8.42□□□□□ -1.06
VPS45-207ENST00000477558 WASF2Q9Y6W5 498 aa8.42□□□□□ -1.06
VPS45-207ENST00000477558 NNTQ13423 1086 aa8.41□□□□□ -1.06
VPS45-207ENST00000477558 RNF135Q8IUD6 432 aa8.41□□□□□ -1.06
VPS45-207ENST00000477558 CCDC82Q8N4S0 544 aa8.41□□□□□ -1.06
VPS45-207ENST00000477558 TFIP11Q9UBB9 837 aaKnown RBP8.41□□□□□ -1.06
VPS45-207ENST00000477558 CDK13Q14004 1512 aaKnown RBP8.41□□□□□ -1.06
VPS45-207ENST00000477558 ERVH48-1M5A8F1 160 aa8.4□□□□□ -1.06
VPS45-207ENST00000477558 NR5A1Q13285 461 aa8.4□□□□□ -1.06
VPS45-207ENST00000477558 HPS1Q92902 700 aa8.4□□□□□ -1.06
VPS45-207ENST00000477558 CDCA7Q9BWT1 371 aaPredicted RBP8.4□□□□□ -1.06
VPS45-207ENST00000477558 TMPRSS4Q9NRS4 437 aa8.4□□□□□ -1.06
VPS45-207ENST00000477558 CCDC18Q5T9S5 1454 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms