RNA–Protein interactions for RNA: ENST00000477556.1

PABPC4-212, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 3

Gene PABPC4, Length 413 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-212ENST00000477556 ARXQ96QS3 562 aa18.29■□□□□ 0.52
PABPC4-212ENST00000477556 SYT17Q9BSW7 474 aa18.29■□□□□ 0.52
PABPC4-212ENST00000477556 MEGF6O75095 1541 aa18.28■□□□□ 0.52
PABPC4-212ENST00000477556 CGNL1Q0VF96 1302 aa18.28■□□□□ 0.52
PABPC4-212ENST00000477556 NBPF6Q5VWK0 638 aa18.28■□□□□ 0.52
PABPC4-212ENST00000477556 AKT1S1Q96B36 256 aa18.28■□□□□ 0.52
PABPC4-212ENST00000477556 NBPF4Q96M43 638 aa18.28■□□□□ 0.52
PABPC4-212ENST00000477556 SLC16A10Q8TF71 515 aa18.27■□□□□ 0.52
PABPC4-212ENST00000477556 RGPD2P0DJD1 1756 aa18.27■□□□□ 0.51
PABPC4-212ENST00000477556 TATP17735 454 aaPredicted RBP18.26■□□□□ 0.51
PABPC4-212ENST00000477556 USHBP1Q8N6Y0 703 aa18.26■□□□□ 0.51
PABPC4-212ENST00000477556 INSRP06213 1382 aa18.26■□□□□ 0.51
PABPC4-212ENST00000477556 FLT4P35916 1363 aa18.26■□□□□ 0.51
PABPC4-212ENST00000477556 KIF24Q5T7B8 1368 aa18.26■□□□□ 0.51
PABPC4-212ENST00000477556 DOT1LQ8TEK3 1739 aa18.26■□□□□ 0.51
PABPC4-212ENST00000477556 TIMELESSQ9UNS1 1208 aa18.25■□□□□ 0.51
PABPC4-212ENST00000477556 HSP90AB2PQ58FF8 381 aa18.24■□□□□ 0.51
PABPC4-212ENST00000477556 TFCP2L1Q9NZI6 479 aa18.24■□□□□ 0.51
PABPC4-212ENST00000477556 NSD2O96028 1365 aa18.24■□□□□ 0.51
PABPC4-212ENST00000477556 SHANK3Q9BYB0 1731 aa18.23■□□□□ 0.51
PABPC4-212ENST00000477556 KIF20BQ96Q89 1820 aa18.23■□□□□ 0.51
PABPC4-212ENST00000477556 POLD1P28340 1107 aa18.23■□□□□ 0.51
PABPC4-212ENST00000477556 KCNQ4P56696 695 aa18.23■□□□□ 0.51
PABPC4-212ENST00000477556 CCNL1Q9UK58 526 aaPredicted RBP18.23■□□□□ 0.51
PABPC4-212ENST00000477556 NSD3Q9BZ95 1437 aa18.23■□□□□ 0.51
PABPC4-212ENST00000477556 PNPLA7Q6ZV29 1317 aa18.23■□□□□ 0.51
PABPC4-212ENST00000477556 MAP3K5Q99683 1374 aa18.22■□□□□ 0.51
PABPC4-212ENST00000477556 PCDH11XQ9BZA7 1347 aa18.22■□□□□ 0.51
PABPC4-212ENST00000477556 PCDH11YQ9BZA8 1340 aa18.22■□□□□ 0.51
PABPC4-212ENST00000477556 QSER1Q2KHR3 1735 aa18.21■□□□□ 0.51
PABPC4-212ENST00000477556 CARD14Q9BXL6 1004 aa18.21■□□□□ 0.51
PABPC4-212ENST00000477556 LY75O60449 1722 aa18.2■□□□□ 0.5
PABPC4-212ENST00000477556 CLSPNQ9HAW4 1339 aa18.2■□□□□ 0.5
PABPC4-212ENST00000477556 HMGB2P26583 209 aaKnown RBP18.19■□□□□ 0.5
PABPC4-212ENST00000477556 KLHL34Q8N239 644 aa18.19■□□□□ 0.5
PABPC4-212ENST00000477556 EMILIN1Q9Y6C2 1016 aa18.19■□□□□ 0.5
PABPC4-212ENST00000477556 PPM1GO15355 546 aaPredicted RBP18.18■□□□□ 0.5
PABPC4-212ENST00000477556 MSH5O43196 834 aa18.17■□□□□ 0.5
PABPC4-212ENST00000477556 PCGF6Q9BYE7 350 aa18.16■□□□□ 0.5
PABPC4-212ENST00000477556 TUBGCP6Q96RT7 1819 aa18.15■□□□□ 0.5
PABPC4-212ENST00000477556 CYP27B1O15528 508 aa18.15■□□□□ 0.5
PABPC4-212ENST00000477556 GPR162Q16538 588 aa18.15■□□□□ 0.5
PABPC4-212ENST00000477556 MPRIPQ6WCQ1 1025 aa18.15■□□□□ 0.5
PABPC4-212ENST00000477556 POLR3GLQ9BT43 218 aa18.15■□□□□ 0.5
PABPC4-212ENST00000477556 WASHC2AQ641Q2 1341 aa18.14■□□□□ 0.49
PABPC4-212ENST00000477556 PALLDQ8WX93 1383 aa18.14■□□□□ 0.49
PABPC4-212ENST00000477556 COL23A1Q86Y22 540 aaPredicted RBP18.13■□□□□ 0.49
PABPC4-212ENST00000477556 ZNF784Q8NCA9 323 aaPredicted RBP18.13■□□□□ 0.49
PABPC4-212ENST00000477556 SMARCC1Q92922 1105 aaPredicted RBP18.13■□□□□ 0.49
PABPC4-212ENST00000477556 SPG7Q9UQ90 795 aa18.13■□□□□ 0.49
PABPC4-212ENST00000477556 COL24A1Q17RW2 1714 aa18.12■□□□□ 0.49
PABPC4-212ENST00000477556 FLAD1Q8NFF5 587 aa18.12■□□□□ 0.49
PABPC4-212ENST00000477556 NCAPD2Q15021 1401 aa18.12■□□□□ 0.49
PABPC4-212ENST00000477556 PELP1Q8IZL8 1130 aaKnown RBP18.11■□□□□ 0.49
PABPC4-212ENST00000477556 CHD4Q14839 1912 aa18.11■□□□□ 0.49
PABPC4-212ENST00000477556 PKD1L3Q7Z443 1732 aa18.1■□□□□ 0.49
PABPC4-212ENST00000477556 EYA1Q99502 592 aa18.1■□□□□ 0.49
PABPC4-212ENST00000477556 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.1■□□□□ 0.49
PABPC4-212ENST00000477556 ANKRD26Q9UPS8 1709 aa18.09■□□□□ 0.49
PABPC4-212ENST00000477556 C5P01031 1676 aa18.09■□□□□ 0.49
PABPC4-212ENST00000477556 NKX1-1Q15270 411 aaPredicted RBP18.09■□□□□ 0.49
PABPC4-212ENST00000477556 POLKQ9UBT6 870 aa18.09■□□□□ 0.49
PABPC4-212ENST00000477556 EIF4G2P78344 907 aaKnown RBP eCLIP18.08■□□□□ 0.48
PABPC4-212ENST00000477556 MSL1Q68DK7 614 aa18.08■□□□□ 0.48
PABPC4-212ENST00000477556 NLGN2Q8NFZ4 835 aa18.08■□□□□ 0.48
PABPC4-212ENST00000477556 PIGBQ92521 554 aa18.08■□□□□ 0.48
PABPC4-212ENST00000477556 AK7Q96M32 723 aa18.08■□□□□ 0.48
PABPC4-212ENST00000477556 MAP2P11137 1827 aaKnown RBP18.07■□□□□ 0.48
PABPC4-212ENST00000477556 TOGARAM1Q9Y4F4 1720 aa18.07■□□□□ 0.48
PABPC4-212ENST00000477556 TNNT2P45379 298 aaPredicted RBP18.06■□□□□ 0.48
PABPC4-212ENST00000477556 IFNL2Q8IZJ0 200 aa18.06■□□□□ 0.48
PABPC4-212ENST00000477556 TMOD3Q9NYL9 352 aa18.06■□□□□ 0.48
PABPC4-212ENST00000477556 ITGB4P16144 1822 aa18.06■□□□□ 0.48
PABPC4-212ENST00000477556 EIF4A2Q14240 407 aaKnown RBP18.05■□□□□ 0.48
PABPC4-212ENST00000477556 TAF1LQ8IZX4 1826 aa18.05■□□□□ 0.48
PABPC4-212ENST00000477556 GRIN3BO60391 1043 aa18.04■□□□□ 0.48
PABPC4-212ENST00000477556 HSPA5P11021 654 aaKnown RBP18.04■□□□□ 0.48
PABPC4-212ENST00000477556 PHKG2P15735 406 aa18.04■□□□□ 0.48
PABPC4-212ENST00000477556 C4BP0C0L5 1744 aa18.03■□□□□ 0.48
PABPC4-212ENST00000477556 LOC102724428A0A0B4J2F2 783 aa18.03■□□□□ 0.48
PABPC4-212ENST00000477556 SIK1P57059 783 aa18.03■□□□□ 0.48
PABPC4-212ENST00000477556 PLEKHG2Q9H7P9 1386 aa18.03■□□□□ 0.48
PABPC4-212ENST00000477556 PHF14O94880 888 aa18.02■□□□□ 0.48
PABPC4-212ENST00000477556 PANK3Q9H999 370 aa18.02■□□□□ 0.48
PABPC4-212ENST00000477556 CD2APQ9Y5K6 639 aa18.02■□□□□ 0.48
PABPC4-212ENST00000477556 SSFA2P28290 1259 aa18.01■□□□□ 0.47
PABPC4-212ENST00000477556 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18■□□□□ 0.47
PABPC4-212ENST00000477556 ASAP1Q9ULH1 1129 aa18■□□□□ 0.47
PABPC4-212ENST00000477556 IGSF1Q8N6C5 1336 aa17.99■□□□□ 0.47
PABPC4-212ENST00000477556 HSP90AB1P08238 724 aaKnown RBP17.99■□□□□ 0.47
PABPC4-212ENST00000477556 YBX3P16989 372 aaKnown RBP eCLIP17.99■□□□□ 0.474e-31■□□□□ 10.2
PABPC4-212ENST00000477556 ATP6V1AP38606 617 aa17.99■□□□□ 0.47
PABPC4-212ENST00000477556 LINC00116Q8NCU8 138 aa17.99■□□□□ 0.47
PABPC4-212ENST00000477556 CCER1Q8TC90 406 aaPredicted RBP17.99■□□□□ 0.47
PABPC4-212ENST00000477556 PLEKHO1Q53GL0 409 aaPredicted RBP17.98■□□□□ 0.47
PABPC4-212ENST00000477556 MORC1Q86VD1 984 aa17.98■□□□□ 0.47
PABPC4-212ENST00000477556 AMIGO3Q86WK7 504 aa17.98■□□□□ 0.47
PABPC4-212ENST00000477556 ATG3Q9NT62 314 aa17.98■□□□□ 0.47
PABPC4-212ENST00000477556 UBR3Q6ZT12 1888 aa17.97■□□□□ 0.47
PABPC4-212ENST00000477556 GNPATO15228 680 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms