RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 USHBP1Q8N6Y0 703 aa15.84■□□□□ 0.13
HDLBP-236ENST00000477477 SYTL4Q96C24 671 aaPredicted RBP15.84■□□□□ 0.13
HDLBP-236ENST00000477477 NSD2O96028 1365 aa15.84■□□□□ 0.13
HDLBP-236ENST00000477477 INSRP06213 1382 aa15.84■□□□□ 0.13
HDLBP-236ENST00000477477 FLT4P35916 1363 aa15.84■□□□□ 0.13
HDLBP-236ENST00000477477 KIF24Q5T7B8 1368 aa15.84■□□□□ 0.13
HDLBP-236ENST00000477477 NSD3Q9BZ95 1437 aa15.84■□□□□ 0.13
HDLBP-236ENST00000477477 DOT1LQ8TEK3 1739 aa15.83■□□□□ 0.13
HDLBP-236ENST00000477477 SHANK3Q9BYB0 1731 aa15.83■□□□□ 0.13
HDLBP-236ENST00000477477 RGPD2P0DJD1 1756 aa15.83■□□□□ 0.12
HDLBP-236ENST00000477477 AKT1S1Q96B36 256 aa15.83■□□□□ 0.12
HDLBP-236ENST00000477477 CARD14Q9BXL6 1004 aa15.83■□□□□ 0.12
HDLBP-236ENST00000477477 CGNL1Q0VF96 1302 aa15.83■□□□□ 0.12
HDLBP-236ENST00000477477 CLSPNQ9HAW4 1339 aa15.83■□□□□ 0.12
HDLBP-236ENST00000477477 KIF20BQ96Q89 1820 aa15.82■□□□□ 0.12
HDLBP-236ENST00000477477 HSP90AB2PQ58FF8 381 aa15.82■□□□□ 0.12
HDLBP-236ENST00000477477 RAPGEF4Q8WZA2 1011 aa15.82■□□□□ 0.12
HDLBP-236ENST00000477477 FHDC1Q9C0D6 1143 aaPredicted RBP15.82■□□□□ 0.12
HDLBP-236ENST00000477477 TATP17735 454 aaPredicted RBP15.8■□□□□ 0.12
HDLBP-236ENST00000477477 SYT17Q9BSW7 474 aa15.8■□□□□ 0.12
HDLBP-236ENST00000477477 KAT6BQ8WYB5 2073 aa15.79■□□□□ 0.12
HDLBP-236ENST00000477477 KCNQ4P56696 695 aa15.79■□□□□ 0.12
HDLBP-236ENST00000477477 ARXQ96QS3 562 aa15.79■□□□□ 0.12
HDLBP-236ENST00000477477 PNPLA7Q6ZV29 1317 aa15.78■□□□□ 0.12
HDLBP-236ENST00000477477 PCDH11XQ9BZA7 1347 aa15.78■□□□□ 0.12
HDLBP-236ENST00000477477 PCDH11YQ9BZA8 1340 aa15.78■□□□□ 0.12
HDLBP-236ENST00000477477 SLC16A10Q8TF71 515 aa15.78■□□□□ 0.12
HDLBP-236ENST00000477477 EMILIN1Q9Y6C2 1016 aa15.78■□□□□ 0.12
HDLBP-236ENST00000477477 LY75O60449 1722 aa15.77■□□□□ 0.12
HDLBP-236ENST00000477477 QSER1Q2KHR3 1735 aa15.77■□□□□ 0.12
HDLBP-236ENST00000477477 MAP3K5Q99683 1374 aa15.77■□□□□ 0.12
HDLBP-236ENST00000477477 PCGF6Q9BYE7 350 aa15.77■□□□□ 0.12
HDLBP-236ENST00000477477 CCNL1Q9UK58 526 aaPredicted RBP15.77■□□□□ 0.12
HDLBP-236ENST00000477477 NCAPD2Q15021 1401 aa15.77■□□□□ 0.11
HDLBP-236ENST00000477477 TFCP2L1Q9NZI6 479 aa15.76■□□□□ 0.11
HDLBP-236ENST00000477477 CYP27B1O15528 508 aa15.74■□□□□ 0.11
HDLBP-236ENST00000477477 ANKRD26Q9UPS8 1709 aa15.74■□□□□ 0.11
HDLBP-236ENST00000477477 WASHC2AQ641Q2 1341 aa15.73■□□□□ 0.11
HDLBP-236ENST00000477477 PPM1GO15355 546 aaPredicted RBP15.73■□□□□ 0.11
HDLBP-236ENST00000477477 POLD1P28340 1107 aa15.73■□□□□ 0.11
HDLBP-236ENST00000477477 TUBGCP6Q96RT7 1819 aa15.73■□□□□ 0.11
HDLBP-236ENST00000477477 UTRNP46939 3433 aa15.72■□□□□ 0.11
HDLBP-236ENST00000477477 PALLDQ8WX93 1383 aa15.72■□□□□ 0.11
HDLBP-236ENST00000477477 COL24A1Q17RW2 1714 aa15.71■□□□□ 0.11
HDLBP-236ENST00000477477 PKD1L3Q7Z443 1732 aa15.71■□□□□ 0.11
HDLBP-236ENST00000477477 POLR3GLQ9BT43 218 aa15.71■□□□□ 0.11
HDLBP-236ENST00000477477 POLKQ9UBT6 870 aa15.71■□□□□ 0.11
HDLBP-236ENST00000477477 MPRIPQ6WCQ1 1025 aa15.7■□□□□ 0.1
HDLBP-236ENST00000477477 EYA1Q99502 592 aa15.7■□□□□ 0.1
HDLBP-236ENST00000477477 TOGARAM1Q9Y4F4 1720 aa15.69■□□□□ 0.1
HDLBP-236ENST00000477477 EIF4G2P78344 907 aaKnown RBP eCLIP15.69■□□□□ 0.1
HDLBP-236ENST00000477477 NKX1-1Q15270 411 aaPredicted RBP15.69■□□□□ 0.1
HDLBP-236ENST00000477477 COL23A1Q86Y22 540 aaPredicted RBP15.69■□□□□ 0.1
HDLBP-236ENST00000477477 KLHL34Q8N239 644 aa15.69■□□□□ 0.1
HDLBP-236ENST00000477477 SPG7Q9UQ90 795 aa15.69■□□□□ 0.1
HDLBP-236ENST00000477477 HSPA5P11021 654 aaKnown RBP15.68■□□□□ 0.1
HDLBP-236ENST00000477477 HMGB2P26583 209 aaKnown RBP15.68■□□□□ 0.1
HDLBP-236ENST00000477477 C5P01031 1676 aa15.67■□□□□ 0.1
HDLBP-236ENST00000477477 MSH5O43196 834 aa15.67■□□□□ 0.1
HDLBP-236ENST00000477477 PIGBQ92521 554 aa15.67■□□□□ 0.1
HDLBP-236ENST00000477477 SMARCC1Q92922 1105 aaPredicted RBP15.67■□□□□ 0.1
HDLBP-236ENST00000477477 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.67■□□□□ 0.15e-13■□□□□ 11.2
HDLBP-236ENST00000477477 TNNT2P45379 298 aaPredicted RBP15.66■□□□□ 0.1
HDLBP-236ENST00000477477 EIF4A2Q14240 407 aaKnown RBP15.66■□□□□ 0.1
HDLBP-236ENST00000477477 GPR162Q16538 588 aa15.65■□□□□ 0.1
HDLBP-236ENST00000477477 ZNF784Q8NCA9 323 aaPredicted RBP15.65■□□□□ 0.1
HDLBP-236ENST00000477477 FLAD1Q8NFF5 587 aa15.65■□□□□ 0.1
HDLBP-236ENST00000477477 MAP2P11137 1827 aaKnown RBP15.65■□□□□ 0.1
HDLBP-236ENST00000477477 PLEKHG2Q9H7P9 1386 aa15.64■□□□□ 0.09
HDLBP-236ENST00000477477 PHKG2P15735 406 aa15.64■□□□□ 0.09
HDLBP-236ENST00000477477 MSL1Q68DK7 614 aa15.64■□□□□ 0.09
HDLBP-236ENST00000477477 NLGN2Q8NFZ4 835 aa15.64■□□□□ 0.09
HDLBP-236ENST00000477477 PANK3Q9H999 370 aa15.64■□□□□ 0.09
HDLBP-236ENST00000477477 ITGB4P16144 1822 aa15.64■□□□□ 0.09
HDLBP-236ENST00000477477 C4BP0C0L5 1744 aa15.63■□□□□ 0.09
HDLBP-236ENST00000477477 IFNL2Q8IZJ0 200 aa15.63■□□□□ 0.09
HDLBP-236ENST00000477477 CCER1Q8TC90 406 aaPredicted RBP15.63■□□□□ 0.09
HDLBP-236ENST00000477477 AK7Q96M32 723 aa15.63■□□□□ 0.09
HDLBP-236ENST00000477477 TMOD3Q9NYL9 352 aa15.63■□□□□ 0.09
HDLBP-236ENST00000477477 IGSF1Q8N6C5 1336 aa15.63■□□□□ 0.09
HDLBP-236ENST00000477477 TAF1LQ8IZX4 1826 aa15.62■□□□□ 0.09
HDLBP-236ENST00000477477 LOC102724428A0A0B4J2F2 783 aa15.62■□□□□ 0.09
HDLBP-236ENST00000477477 SIK1P57059 783 aa15.62■□□□□ 0.09
HDLBP-236ENST00000477477 AMIGO3Q86WK7 504 aa15.61■□□□□ 0.09
HDLBP-236ENST00000477477 PELP1Q8IZL8 1130 aaKnown RBP15.61■□□□□ 0.09
HDLBP-236ENST00000477477 GOLGB1Q14789 3259 aaKnown RBP15.6■□□□□ 0.09
HDLBP-236ENST00000477477 ASAP1Q9ULH1 1129 aa15.6■□□□□ 0.09
HDLBP-236ENST00000477477 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.59■□□□□ 0.09
HDLBP-236ENST00000477477 PHF14O94880 888 aa15.59■□□□□ 0.09
HDLBP-236ENST00000477477 LINC00116Q8NCU8 138 aa15.59■□□□□ 0.09
HDLBP-236ENST00000477477 CHD4Q14839 1912 aa15.58■□□□□ 0.09
HDLBP-236ENST00000477477 SSFA2P28290 1259 aa15.58■□□□□ 0.08
HDLBP-236ENST00000477477 MORC1Q86VD1 984 aa15.58■□□□□ 0.08
HDLBP-236ENST00000477477 ATG3Q9NT62 314 aa15.58■□□□□ 0.08
HDLBP-236ENST00000477477 YBX3P16989 372 aaKnown RBP eCLIP15.57■□□□□ 0.083e-7■■□□□ 12.6
HDLBP-236ENST00000477477 ITPK1Q13572 414 aa15.57■□□□□ 0.08
HDLBP-236ENST00000477477 SMIM5Q71RC9 77 aa15.57■□□□□ 0.08
HDLBP-236ENST00000477477 CD2APQ9Y5K6 639 aa15.57■□□□□ 0.08
HDLBP-236ENST00000477477 UBR3Q6ZT12 1888 aa15.57■□□□□ 0.08
HDLBP-236ENST00000477477 HSP90AB1P08238 724 aaKnown RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms