RNA–Protein interactions for RNA: ENST00000477393.1

RNF7-204, Transcript of ring finger protein 7, humanhuman

TSL 2

Gene RNF7, Length 862 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF7-204ENST00000477393 TFCP2L1Q9NZI6 479 aa21.32■■□□□ 1
RNF7-204ENST00000477393 NSD2O96028 1365 aa21.32■■□□□ 1
RNF7-204ENST00000477393 ST20-MTHFSA0A0A6YYL1 179 aa21.31■■□□□ 1
RNF7-204ENST00000477393 FBLN1P23142 703 aa21.31■■□□□ 1
RNF7-204ENST00000477393 GPR162Q16538 588 aa21.31■■□□□ 1
RNF7-204ENST00000477393 SYTL4Q96C24 671 aaPredicted RBP21.31■■□□□ 1
RNF7-204ENST00000477393 DOT1LQ8TEK3 1739 aa21.31■■□□□ 1
RNF7-204ENST00000477393 SHANK3Q9BYB0 1731 aa21.31■■□□□ 1
RNF7-204ENST00000477393 TUBGCP6Q96RT7 1819 aa21.31■■□□□ 1
RNF7-204ENST00000477393 KCNQ4P56696 695 aa21.3■■□□□ 1
RNF7-204ENST00000477393 RGPD2P0DJD1 1756 aa21.3■■□□□ 1
RNF7-204ENST00000477393 RTL1A6NKG5 1358 aa21.29■■□□□ 1
RNF7-204ENST00000477393 MEGF6O75095 1541 aa21.29■■□□□ 1
RNF7-204ENST00000477393 C1QTNF8P60827 252 aa21.28■■□□□ 1
RNF7-204ENST00000477393 CGNL1Q0VF96 1302 aa21.28■■□□□ 1
RNF7-204ENST00000477393 NBPF6Q5VWK0 638 aa21.26■□□□□ 0.99
RNF7-204ENST00000477393 NBPF4Q96M43 638 aa21.26■□□□□ 0.99
RNF7-204ENST00000477393 CCNL1Q9UK58 526 aaPredicted RBP21.26■□□□□ 0.99
RNF7-204ENST00000477393 FYB1O15117 783 aa21.25■□□□□ 0.99
RNF7-204ENST00000477393 KLHL34Q8N239 644 aa21.24■□□□□ 0.99
RNF7-204ENST00000477393 USP47Q96K76 1375 aa21.23■□□□□ 0.99
RNF7-204ENST00000477393 RRS1Q15050 365 aaKnown RBP21.23■□□□□ 0.99
RNF7-204ENST00000477393 NLGN2Q8NFZ4 835 aa21.23■□□□□ 0.99
RNF7-204ENST00000477393 HMGB2P26583 209 aaKnown RBP21.22■□□□□ 0.99
RNF7-204ENST00000477393 COL23A1Q86Y22 540 aaPredicted RBP21.22■□□□□ 0.99
RNF7-204ENST00000477393 RAPGEF4Q8WZA2 1011 aa21.22■□□□□ 0.99
RNF7-204ENST00000477393 GOLGB1Q14789 3259 aaKnown RBP21.21■□□□□ 0.99
RNF7-204ENST00000477393 SENP3-EIF4A1A0A087X0R7 540 aa21.2■□□□□ 0.98
RNF7-204ENST00000477393 GGNBP2Q9H3C7 697 aa21.2■□□□□ 0.98
RNF7-204ENST00000477393 SMG6Q86US8 1419 aaKnown RBP21.2■□□□□ 0.98
RNF7-204ENST00000477393 GRIN3BO60391 1043 aa21.19■□□□□ 0.98
RNF7-204ENST00000477393 TATP17735 454 aaPredicted RBP21.19■□□□□ 0.98
RNF7-204ENST00000477393 TMF1P82094 1093 aa21.19■□□□□ 0.98
RNF7-204ENST00000477393 PELP1Q8IZL8 1130 aaKnown RBP21.19■□□□□ 0.98
RNF7-204ENST00000477393 USHBP1Q8N6Y0 703 aa21.19■□□□□ 0.98
RNF7-204ENST00000477393 INSRP06213 1382 aa21.19■□□□□ 0.98
RNF7-204ENST00000477393 KIF24Q5T7B8 1368 aa21.18■□□□□ 0.98
RNF7-204ENST00000477393 MSH5O43196 834 aa21.17■□□□□ 0.98
RNF7-204ENST00000477393 HSP90AB2PQ58FF8 381 aa21.17■□□□□ 0.98
RNF7-204ENST00000477393 FLAD1Q8NFF5 587 aa21.17■□□□□ 0.98
RNF7-204ENST00000477393 PCDH11XQ9BZA7 1347 aa21.17■□□□□ 0.98
RNF7-204ENST00000477393 PCDH11YQ9BZA8 1340 aa21.17■□□□□ 0.98
RNF7-204ENST00000477393 GIGYF1O75420 1035 aaPredicted RBP21.16■□□□□ 0.98
RNF7-204ENST00000477393 YBX3P16989 372 aaKnown RBP eCLIP21.16■□□□□ 0.983e-7■■■■□ 19.4
RNF7-204ENST00000477393 C5P01031 1676 aa21.15■□□□□ 0.98
RNF7-204ENST00000477393 FLT4P35916 1363 aa21.15■□□□□ 0.98
RNF7-204ENST00000477393 TAF1LQ8IZX4 1826 aa21.14■□□□□ 0.97
RNF7-204ENST00000477393 CD2APQ9Y5K6 639 aa21.14■□□□□ 0.97
RNF7-204ENST00000477393 PALLDQ8WX93 1383 aa21.13■□□□□ 0.97
RNF7-204ENST00000477393 CYP27B1O15528 508 aa21.13■□□□□ 0.97
RNF7-204ENST00000477393 CDCA8Q53HL2 280 aa21.12■□□□□ 0.97
RNF7-204ENST00000477393 MSL1Q68DK7 614 aa21.12■□□□□ 0.97
RNF7-204ENST00000477393 MPRIPQ6WCQ1 1025 aa21.12■□□□□ 0.97
RNF7-204ENST00000477393 KIF20BQ96Q89 1820 aa21.11■□□□□ 0.97
RNF7-204ENST00000477393 SMARCC1Q92922 1105 aaPredicted RBP21.11■□□□□ 0.97
RNF7-204ENST00000477393 ITGB4P16144 1822 aa21.1■□□□□ 0.97
RNF7-204ENST00000477393 NCAPD2Q15021 1401 aa21.1■□□□□ 0.97
RNF7-204ENST00000477393 NKX1-1Q15270 411 aaPredicted RBP21.09■□□□□ 0.97
RNF7-204ENST00000477393 CARD14Q9BXL6 1004 aa21.09■□□□□ 0.97
RNF7-204ENST00000477393 TOGARAM1Q9Y4F4 1720 aa21.09■□□□□ 0.97
RNF7-204ENST00000477393 C4BP0C0L5 1744 aa21.08■□□□□ 0.97
RNF7-204ENST00000477393 PKD1L3Q7Z443 1732 aa21.08■□□□□ 0.97
RNF7-204ENST00000477393 PIGBQ92521 554 aa21.06■□□□□ 0.96
RNF7-204ENST00000477393 EMILIN1Q9Y6C2 1016 aa21.06■□□□□ 0.96
RNF7-204ENST00000477393 AMIGO3Q86WK7 504 aa21.05■□□□□ 0.96
RNF7-204ENST00000477393 AK7Q96M32 723 aa21.05■□□□□ 0.96
RNF7-204ENST00000477393 UBR3Q6ZT12 1888 aa21.05■□□□□ 0.96
RNF7-204ENST00000477393 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.04■□□□□ 0.96
RNF7-204ENST00000477393 SPG7Q9UQ90 795 aa21.04■□□□□ 0.96
RNF7-204ENST00000477393 MAP2P11137 1827 aaKnown RBP21.04■□□□□ 0.96
RNF7-204ENST00000477393 NSD3Q9BZ95 1437 aa21.04■□□□□ 0.96
RNF7-204ENST00000477393 WASHC2AQ641Q2 1341 aa21.04■□□□□ 0.96
RNF7-204ENST00000477393 ATP10DQ9P241 1426 aa21.03■□□□□ 0.96
RNF7-204ENST00000477393 ANKRD26Q9UPS8 1709 aa21.02■□□□□ 0.96
RNF7-204ENST00000477393 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.02■□□□□ 0.96
RNF7-204ENST00000477393 SSFA2P28290 1259 aa21.02■□□□□ 0.96
RNF7-204ENST00000477393 LOC102724428A0A0B4J2F2 783 aa21.01■□□□□ 0.95
RNF7-204ENST00000477393 SIK1P57059 783 aa21.01■□□□□ 0.95
RNF7-204ENST00000477393 ADCY9O60503 1353 aa21■□□□□ 0.95
RNF7-204ENST00000477393 EYA1Q99502 592 aa21■□□□□ 0.95
RNF7-204ENST00000477393 PPM1GO15355 546 aaPredicted RBP20.99■□□□□ 0.95
RNF7-204ENST00000477393 PHF14O94880 888 aa20.98■□□□□ 0.95
RNF7-204ENST00000477393 SMIM5Q71RC9 77 aa20.98■□□□□ 0.95
RNF7-204ENST00000477393 LINC00116Q8NCU8 138 aa20.98■□□□□ 0.95
RNF7-204ENST00000477393 TMOD3Q9NYL9 352 aa20.98■□□□□ 0.95
RNF7-204ENST00000477393 CEP350Q5VT06 3117 aa20.98■□□□□ 0.95
RNF7-204ENST00000477393 IFNL2Q8IZJ0 200 aa20.97■□□□□ 0.95
RNF7-204ENST00000477393 GPBP1L1Q9HC44 474 aaPredicted RBP20.97■□□□□ 0.95
RNF7-204ENST00000477393 ASAP1Q9ULH1 1129 aa20.97■□□□□ 0.95
RNF7-204ENST00000477393 IGSF1Q8N6C5 1336 aa20.97■□□□□ 0.95
RNF7-204ENST00000477393 PHKG2P15735 406 aa20.96■□□□□ 0.95
RNF7-204ENST00000477393 ITPK1Q13572 414 aa20.96■□□□□ 0.95
RNF7-204ENST00000477393 POLKQ9UBT6 870 aa20.96■□□□□ 0.95
RNF7-204ENST00000477393 PLEKHG2Q9H7P9 1386 aa20.96■□□□□ 0.95
RNF7-204ENST00000477393 ATP6V1AP38606 617 aa20.94■□□□□ 0.94
RNF7-204ENST00000477393 ATG3Q9NT62 314 aa20.94■□□□□ 0.94
RNF7-204ENST00000477393 GNPATO15228 680 aa20.93■□□□□ 0.94
RNF7-204ENST00000477393 TIMELESSQ9UNS1 1208 aa20.93■□□□□ 0.94
RNF7-204ENST00000477393 EIF4A2Q14240 407 aaKnown RBP20.91■□□□□ 0.94
RNF7-204ENST00000477393 HSPA6P17066 643 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms