RNA–Protein interactions for RNA: ENST00000477306.1

HDGF-207, Transcript of heparin binding growth factor, humanhuman

TSL 2

Gene HDGF, Length 686 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-207ENST00000477306 KLHL34Q8N239 644 aa20.33■□□□□ 0.85
HDGF-207ENST00000477306 ZCRB1Q8TBF4 217 aaKnown RBP20.33■□□□□ 0.85
HDGF-207ENST00000477306 SLC16A10Q8TF71 515 aa20.33■□□□□ 0.85
HDGF-207ENST00000477306 TIMELESSQ9UNS1 1208 aa20.33■□□□□ 0.85
HDGF-207ENST00000477306 QSER1Q2KHR3 1735 aa20.33■□□□□ 0.84
HDGF-207ENST00000477306 SHANK3Q9BYB0 1731 aa20.33■□□□□ 0.84
HDGF-207ENST00000477306 RRS1Q15050 365 aaKnown RBP20.32■□□□□ 0.84
HDGF-207ENST00000477306 TFCP2L1Q9NZI6 479 aa20.32■□□□□ 0.84
HDGF-207ENST00000477306 NSD2O96028 1365 aa20.32■□□□□ 0.84
HDGF-207ENST00000477306 POLD1P28340 1107 aa20.31■□□□□ 0.84
HDGF-207ENST00000477306 TUBGCP6Q96RT7 1819 aa20.31■□□□□ 0.84
HDGF-207ENST00000477306 CHD4Q14839 1912 aa20.31■□□□□ 0.84
HDGF-207ENST00000477306 CLSPNQ9HAW4 1339 aa20.3■□□□□ 0.84
HDGF-207ENST00000477306 GPR162Q16538 588 aa20.3■□□□□ 0.84
HDGF-207ENST00000477306 RTL1A6NKG5 1358 aa20.3■□□□□ 0.84
HDGF-207ENST00000477306 USP47Q96K76 1375 aa20.3■□□□□ 0.84
HDGF-207ENST00000477306 LY75O60449 1722 aa20.3■□□□□ 0.84
HDGF-207ENST00000477306 NBPF6Q5VWK0 638 aa20.29■□□□□ 0.84
HDGF-207ENST00000477306 USHBP1Q8N6Y0 703 aa20.29■□□□□ 0.84
HDGF-207ENST00000477306 NBPF4Q96M43 638 aa20.29■□□□□ 0.84
HDGF-207ENST00000477306 GGNBP2Q9H3C7 697 aa20.29■□□□□ 0.84
HDGF-207ENST00000477306 UTRNP46939 3433 aa20.28■□□□□ 0.84
HDGF-207ENST00000477306 FYB1O15117 783 aa20.28■□□□□ 0.84
HDGF-207ENST00000477306 TMF1P82094 1093 aa20.28■□□□□ 0.84
HDGF-207ENST00000477306 CCNL1Q9UK58 526 aaPredicted RBP20.28■□□□□ 0.84
HDGF-207ENST00000477306 CDCA8Q53HL2 280 aa20.27■□□□□ 0.84
HDGF-207ENST00000477306 COL24A1Q17RW2 1714 aa20.27■□□□□ 0.83
HDGF-207ENST00000477306 PELP1Q8IZL8 1130 aaKnown RBP20.26■□□□□ 0.83
HDGF-207ENST00000477306 SMG6Q86US8 1419 aaKnown RBP20.26■□□□□ 0.83
HDGF-207ENST00000477306 RAPGEF4Q8WZA2 1011 aa20.25■□□□□ 0.83
HDGF-207ENST00000477306 MSH5O43196 834 aa20.24■□□□□ 0.83
HDGF-207ENST00000477306 CGNL1Q0VF96 1302 aa20.24■□□□□ 0.83
HDGF-207ENST00000477306 TATP17735 454 aaPredicted RBP20.23■□□□□ 0.83
HDGF-207ENST00000477306 NLGN2Q8NFZ4 835 aa20.23■□□□□ 0.83
HDGF-207ENST00000477306 HSP90AB2PQ58FF8 381 aa20.22■□□□□ 0.83
HDGF-207ENST00000477306 COL23A1Q86Y22 540 aaPredicted RBP20.22■□□□□ 0.83
HDGF-207ENST00000477306 INSRP06213 1382 aa20.21■□□□□ 0.83
HDGF-207ENST00000477306 KIF20BQ96Q89 1820 aa20.2■□□□□ 0.82
HDGF-207ENST00000477306 PCDH11XQ9BZA7 1347 aa20.2■□□□□ 0.82
HDGF-207ENST00000477306 PCDH11YQ9BZA8 1340 aa20.2■□□□□ 0.82
HDGF-207ENST00000477306 FLT4P35916 1363 aa20.2■□□□□ 0.82
HDGF-207ENST00000477306 MSL1Q68DK7 614 aa20.19■□□□□ 0.82
HDGF-207ENST00000477306 C1QTNF8P60827 252 aa20.18■□□□□ 0.82
HDGF-207ENST00000477306 C5P01031 1676 aa20.18■□□□□ 0.82
HDGF-207ENST00000477306 SENP3-EIF4A1A0A087X0R7 540 aa20.17■□□□□ 0.82
HDGF-207ENST00000477306 MPRIPQ6WCQ1 1025 aa20.17■□□□□ 0.82
HDGF-207ENST00000477306 PALLDQ8WX93 1383 aa20.17■□□□□ 0.82
HDGF-207ENST00000477306 EMILIN1Q9Y6C2 1016 aa20.16■□□□□ 0.82
HDGF-207ENST00000477306 KIF24Q5T7B8 1368 aa20.16■□□□□ 0.82
HDGF-207ENST00000477306 CYP27B1O15528 508 aa20.15■□□□□ 0.82
HDGF-207ENST00000477306 YBX3P16989 372 aaKnown RBP eCLIP20.14■□□□□ 0.81
HDGF-207ENST00000477306 CARD14Q9BXL6 1004 aa20.14■□□□□ 0.81
HDGF-207ENST00000477306 TOGARAM1Q9Y4F4 1720 aa20.13■□□□□ 0.81
HDGF-207ENST00000477306 NSD3Q9BZ95 1437 aa20.13■□□□□ 0.81
HDGF-207ENST00000477306 TAF1LQ8IZX4 1826 aa20.13■□□□□ 0.81
HDGF-207ENST00000477306 PPM1GO15355 546 aaPredicted RBP20.12■□□□□ 0.81
HDGF-207ENST00000477306 PKD1L3Q7Z443 1732 aa20.11■□□□□ 0.81
HDGF-207ENST00000477306 GRIN3BO60391 1043 aa20.11■□□□□ 0.81
HDGF-207ENST00000477306 GIGYF1O75420 1035 aaPredicted RBP20.11■□□□□ 0.81
HDGF-207ENST00000477306 FLAD1Q8NFF5 587 aa20.11■□□□□ 0.81
HDGF-207ENST00000477306 ITGB4P16144 1822 aa20.11■□□□□ 0.81
HDGF-207ENST00000477306 GOLGB1Q14789 3259 aaKnown RBP20.1■□□□□ 0.81
HDGF-207ENST00000477306 HMGB2P26583 209 aaKnown RBP20.1■□□□□ 0.81
HDGF-207ENST00000477306 SMARCC1Q92922 1105 aaPredicted RBP20.1■□□□□ 0.81
HDGF-207ENST00000477306 C4BP0C0L5 1744 aa20.1■□□□□ 0.81
HDGF-207ENST00000477306 AK7Q96M32 723 aa20.09■□□□□ 0.81
HDGF-207ENST00000477306 PCGF6Q9BYE7 350 aa20.09■□□□□ 0.81
HDGF-207ENST00000477306 AMIGO3Q86WK7 504 aa20.08■□□□□ 0.81
HDGF-207ENST00000477306 PIGBQ92521 554 aa20.08■□□□□ 0.81
HDGF-207ENST00000477306 CD2APQ9Y5K6 639 aa20.08■□□□□ 0.81
HDGF-207ENST00000477306 NCAPD2Q15021 1401 aa20.08■□□□□ 0.8
HDGF-207ENST00000477306 PHF14O94880 888 aa20.07■□□□□ 0.8
HDGF-207ENST00000477306 SMIM5Q71RC9 77 aa20.07■□□□□ 0.8
HDGF-207ENST00000477306 SPG7Q9UQ90 795 aa20.07■□□□□ 0.8
HDGF-207ENST00000477306 NKX1-1Q15270 411 aaPredicted RBP20.06■□□□□ 0.8
HDGF-207ENST00000477306 ANKRD26Q9UPS8 1709 aa20.06■□□□□ 0.8
HDGF-207ENST00000477306 WASHC2AQ641Q2 1341 aa20.05■□□□□ 0.8
HDGF-207ENST00000477306 EYA1Q99502 592 aa20.05■□□□□ 0.8
HDGF-207ENST00000477306 UBR3Q6ZT12 1888 aa20.04■□□□□ 0.8
HDGF-207ENST00000477306 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.03■□□□□ 0.8
HDGF-207ENST00000477306 LOC102724428A0A0B4J2F2 783 aa20.03■□□□□ 0.8
HDGF-207ENST00000477306 SIK1P57059 783 aa20.03■□□□□ 0.8
HDGF-207ENST00000477306 LINC00116Q8NCU8 138 aa20.03■□□□□ 0.8
HDGF-207ENST00000477306 TMOD3Q9NYL9 352 aa20.03■□□□□ 0.8
HDGF-207ENST00000477306 MAP2P11137 1827 aaKnown RBP20.02■□□□□ 0.8
HDGF-207ENST00000477306 ATP10DQ9P241 1426 aa20.02■□□□□ 0.79
HDGF-207ENST00000477306 POLR3GLQ9BT43 218 aa20.01■□□□□ 0.79
HDGF-207ENST00000477306 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.01■□□□□ 0.79
HDGF-207ENST00000477306 POLKQ9UBT6 870 aa20.01■□□□□ 0.79
HDGF-207ENST00000477306 WWC3Q9ULE0 1092 aa20.01■□□□□ 0.79
HDGF-207ENST00000477306 ASAP1Q9ULH1 1129 aa20.01■□□□□ 0.79
HDGF-207ENST00000477306 PHKG2P15735 406 aa20■□□□□ 0.79
HDGF-207ENST00000477306 SSFA2P28290 1259 aa20■□□□□ 0.79
HDGF-207ENST00000477306 EIF4G2P78344 907 aaKnown RBP eCLIP20■□□□□ 0.79
HDGF-207ENST00000477306 GNPATO15228 680 aa19.99■□□□□ 0.79
HDGF-207ENST00000477306 TNNT2P45379 298 aaPredicted RBP19.99■□□□□ 0.79
HDGF-207ENST00000477306 ITPK1Q13572 414 aa19.99■□□□□ 0.79
HDGF-207ENST00000477306 IFNL2Q8IZJ0 200 aa19.99■□□□□ 0.79
HDGF-207ENST00000477306 IGSF1Q8N6C5 1336 aa19.99■□□□□ 0.79
HDGF-207ENST00000477306 ATP6V1AP38606 617 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms