RNA–Protein interactions for RNA: ENST00000477155.5

CCDC30-209, Transcript of coiled-coil domain containing 30, humanhuman

TSL 1 (best)

Gene CCDC30, Length 3,653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-209ENST00000477155 HAP1P54257 671 aaPredicted RBP8.5□□□□□ -1.05
CCDC30-209ENST00000477155 NLRP2Q9NX02 1062 aa8.5□□□□□ -1.05
CCDC30-209ENST00000477155 SPATA31A3Q5VYP0 1347 aa8.5□□□□□ -1.05
CCDC30-209ENST00000477155 RTL1A6NKG5 1358 aa8.5□□□□□ -1.05
CCDC30-209ENST00000477155 RGPD1P0DJD0 1748 aa8.5□□□□□ -1.05
CCDC30-209ENST00000477155 CSB-PGBD3P0DP91 1061 aa8.5□□□□□ -1.05
CCDC30-209ENST00000477155 IL17REQ8NFR9 667 aa8.5□□□□□ -1.05
CCDC30-209ENST00000477155 TSPYL4Q9UJ04 414 aa8.5□□□□□ -1.05
CCDC30-209ENST00000477155 ATF7IPQ6VMQ6 1270 aa8.49□□□□□ -1.05
CCDC30-209ENST00000477155 ITPRIPQ8IWB1 547 aa8.49□□□□□ -1.05
CCDC30-209ENST00000477155 XIRP1Q702N8 1843 aaKnown RBP8.48□□□□□ -1.05
CCDC30-209ENST00000477155 ALDH1L2Q3SY69 923 aa8.48□□□□□ -1.05
CCDC30-209ENST00000477155 LGR6Q9HBX8 967 aa8.48□□□□□ -1.05
CCDC30-209ENST00000477155 KIF1AQ12756 1690 aa8.48□□□□□ -1.05
CCDC30-209ENST00000477155 TRPM3Q9HCF6 1732 aaPredicted RBP8.48□□□□□ -1.05
CCDC30-209ENST00000477155 IPO8O15397 1037 aaKnown RBP8.48□□□□□ -1.05
CCDC30-209ENST00000477155 ZNF530Q6P9A1 599 aaPredicted RBP8.48□□□□□ -1.05
CCDC30-209ENST00000477155 MPRIPQ6WCQ1 1025 aa8.48□□□□□ -1.05
CCDC30-209ENST00000477155 IGHDP01880 384 aa8.48□□□□□ -1.05
CCDC30-209ENST00000477155 TMEM57Q8N5G2 664 aa8.48□□□□□ -1.05
CCDC30-209ENST00000477155 MRPL50Q8N5N7 158 aaKnown RBP8.48□□□□□ -1.05
CCDC30-209ENST00000477155 TNS3Q68CZ2 1445 aa8.47□□□□□ -1.05
CCDC30-209ENST00000477155 MVPQ14764 893 aaKnown RBP8.47□□□□□ -1.05
CCDC30-209ENST00000477155 NECTIN2Q92692 538 aa8.47□□□□□ -1.05
CCDC30-209ENST00000477155 RBM19Q9Y4C8 960 aaKnown RBP8.47□□□□□ -1.05
CCDC30-209ENST00000477155 KIAA0232Q92628 1395 aa8.47□□□□□ -1.05
CCDC30-209ENST00000477155 ERBB3P21860 1342 aa8.47□□□□□ -1.05
CCDC30-209ENST00000477155 KIF16BQ96L93 1317 aa8.47□□□□□ -1.05
CCDC30-209ENST00000477155 USP54Q70EL1 1684 aa8.47□□□□□ -1.05
CCDC30-209ENST00000477155 PLEKHO1Q53GL0 409 aaPredicted RBP8.47□□□□□ -1.05
CCDC30-209ENST00000477155 PCDHB15Q9Y5E8 787 aa8.47□□□□□ -1.05
CCDC30-209ENST00000477155 CRB1P82279 1406 aa8.47□□□□□ -1.05
CCDC30-209ENST00000477155 MED1Q15648 1581 aaPredicted RBP8.47□□□□□ -1.05
CCDC30-209ENST00000477155 SLIT3O75094 1523 aa8.47□□□□□ -1.05
CCDC30-209ENST00000477155 PRDM11Q9NQV5 511 aa8.47□□□□□ -1.05
CCDC30-209ENST00000477155 MAP3K5Q99683 1374 aa8.46□□□□□ -1.05
CCDC30-209ENST00000477155 RGPD2P0DJD1 1756 aa8.46□□□□□ -1.05
CCDC30-209ENST00000477155 MS4A1P11836 297 aa8.46□□□□□ -1.05
CCDC30-209ENST00000477155 ZNF428Q96B54 188 aa8.46□□□□□ -1.05
CCDC30-209ENST00000477155 HTATSF1O43719 755 aaKnown RBP8.46□□□□□ -1.06
CCDC30-209ENST00000477155 TAF7Q15545 349 aaPredicted RBP8.46□□□□□ -1.06
CCDC30-209ENST00000477155 CENPQQ7L2Z9 268 aaPredicted RBP8.46□□□□□ -1.06
CCDC30-209ENST00000477155 PXDNQ92626 1479 aa8.46□□□□□ -1.06
CCDC30-209ENST00000477155 SOS2Q07890 1332 aaPredicted RBP8.46□□□□□ -1.06
CCDC30-209ENST00000477155 C1orf141Q5JVX7 400 aa8.45□□□□□ -1.06
CCDC30-209ENST00000477155 RAPGEF4Q8WZA2 1011 aa8.45□□□□□ -1.06
CCDC30-209ENST00000477155 KDM2BQ8NHM5 1336 aa8.45□□□□□ -1.06
CCDC30-209ENST00000477155 ALS2Q96Q42 1657 aa8.45□□□□□ -1.06
CCDC30-209ENST00000477155 SLC4A2P04920 1241 aa8.45□□□□□ -1.06
CCDC30-209ENST00000477155 RGS3P49796 1198 aa8.45□□□□□ -1.06
CCDC30-209ENST00000477155 TEFQ10587 303 aa8.44□□□□□ -1.06
CCDC30-209ENST00000477155 AMOTQ4VCS5 1084 aa8.44□□□□□ -1.06
CCDC30-209ENST00000477155 RGPD5Q99666 1765 aa8.44□□□□□ -1.06
CCDC30-209ENST00000477155 STRN4Q9NRL3 753 aa8.44□□□□□ -1.06
CCDC30-209ENST00000477155 DDX19BQ9UMR2 479 aa8.44□□□□□ -1.06
CCDC30-209ENST00000477155 AKAP4Q5JQC9 854 aa8.44□□□□□ -1.06
CCDC30-209ENST00000477155 KCNQ3O43525 872 aa8.43□□□□□ -1.06
CCDC30-209ENST00000477155 TATP17735 454 aaPredicted RBP8.43□□□□□ -1.06
CCDC30-209ENST00000477155 TOM1L2Q6ZVM7 507 aa8.43□□□□□ -1.06
CCDC30-209ENST00000477155 USP35Q9P2H5 1018 aa8.43□□□□□ -1.06
CCDC30-209ENST00000477155 EIF2S2P20042 333 aaKnown RBP8.43□□□□□ -1.06
CCDC30-209ENST00000477155 BRPF1P55201 1214 aaPredicted RBP8.43□□□□□ -1.06
CCDC30-209ENST00000477155 BTBD11A6QL63 1104 aa8.42□□□□□ -1.06
CCDC30-209ENST00000477155 RNMTO43148 476 aaKnown RBP8.42□□□□□ -1.06
CCDC30-209ENST00000477155 G2E3Q7L622 706 aa8.42□□□□□ -1.06
CCDC30-209ENST00000477155 C1orf115Q9H7X2 142 aa8.42□□□□□ -1.06
CCDC30-209ENST00000477155 EVA1CP58658 441 aa8.42□□□□□ -1.06
CCDC30-209ENST00000477155 ARHGAP45Q92619 1136 aa8.42□□□□□ -1.06
CCDC30-209ENST00000477155 PIP4K2BP78356 416 aa8.42□□□□□ -1.06
CCDC30-209ENST00000477155 F6X3S4 739 aa8.41□□□□□ -1.06
CCDC30-209ENST00000477155 SLC4A10Q6U841 1118 aa8.41□□□□□ -1.06
CCDC30-209ENST00000477155 STK31Q9BXU1 1019 aa8.41□□□□□ -1.06
CCDC30-209ENST00000477155 API5Q9BZZ5 524 aaKnown RBP8.41□□□□□ -1.06
CCDC30-209ENST00000477155 RWDD1Q9H446 243 aaPredicted RBP8.41□□□□□ -1.06
CCDC30-209ENST00000477155 ZBTB40Q9NUA8 1239 aa8.41□□□□□ -1.06
CCDC30-209ENST00000477155 ZBTB7BO15156 539 aaPredicted RBP8.41□□□□□ -1.06
CCDC30-209ENST00000477155 PHRF1Q9P1Y6 1649 aaKnown RBP8.4□□□□□ -1.06
CCDC30-209ENST00000477155 CEMIPQ8WUJ3 1361 aa8.4□□□□□ -1.06
CCDC30-209ENST00000477155 AAMPQ13685 434 aa8.4□□□□□ -1.06
CCDC30-209ENST00000477155 SPG7Q9UQ90 795 aa8.4□□□□□ -1.06
CCDC30-209ENST00000477155 CPDO75976 1380 aa8.4□□□□□ -1.06
CCDC30-209ENST00000477155 CCDC30Q5VVM6 783 aa8.4□□□□□ -1.06
CCDC30-209ENST00000477155 LARP1Q6PKG0 1096 aaKnown RBP8.4□□□□□ -1.06
CCDC30-209ENST00000477155 BCL11AQ9H165 835 aa8.4□□□□□ -1.06
CCDC30-209ENST00000477155 EIF4A1P60842 406 aaKnown RBP8.4□□□□□ -1.07
CCDC30-209ENST00000477155 SLC39A6Q13433 755 aa8.4□□□□□ -1.07
CCDC30-209ENST00000477155 HDGFL1Q5TGJ6 251 aa8.4□□□□□ -1.07
CCDC30-209ENST00000477155 NFATC2IPQ8NCF5 419 aa8.4□□□□□ -1.07
CCDC30-209ENST00000477155 ABCC4O15439 1325 aa8.39□□□□□ -1.07
CCDC30-209ENST00000477155 CYP27B1O15528 508 aa8.39□□□□□ -1.07
CCDC30-209ENST00000477155 ANXA1P04083 346 aa8.39□□□□□ -1.07
CCDC30-209ENST00000477155 PHKG2P15735 406 aa8.39□□□□□ -1.07
CCDC30-209ENST00000477155 FKBP5Q13451 457 aaPredicted RBP8.39□□□□□ -1.07
CCDC30-209ENST00000477155 IFNL2Q8IZJ0 200 aa8.39□□□□□ -1.07
CCDC30-209ENST00000477155 WDR17Q8IZU2 1322 aa8.39□□□□□ -1.07
CCDC30-209ENST00000477155 MEGF6O75095 1541 aa8.39□□□□□ -1.07
CCDC30-209ENST00000477155 PDE4AP27815 886 aa8.39□□□□□ -1.07
CCDC30-209ENST00000477155 DDX54Q8TDD1 881 aaKnown RBP8.39□□□□□ -1.07
CCDC30-209ENST00000477155 BTG4Q9NY30 223 aa8.39□□□□□ -1.07
CCDC30-209ENST00000477155 CAMTA1Q9Y6Y1 1673 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms