RNA–Protein interactions for RNA: ENST00000476961.5

CNTNAP3B-205, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 2,643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-205ENST00000476961 CTR9Q6PD62 1173 aa10.19□□□□□ -0.78
CNTNAP3B-205ENST00000476961 SLC26A8Q96RN1 970 aa10.19□□□□□ -0.78
CNTNAP3B-205ENST00000476961 PRKRIP1Q9H875 184 aaPredicted RBP10.19□□□□□ -0.78
CNTNAP3B-205ENST00000476961 BRMS1Q9HCU9 246 aa10.19□□□□□ -0.78
CNTNAP3B-205ENST00000476961 PER1O15534 1290 aaPredicted RBP10.19□□□□□ -0.78
CNTNAP3B-205ENST00000476961 DHX16O60231 1041 aaKnown RBP10.19□□□□□ -0.78
CNTNAP3B-205ENST00000476961 HS1BP3Q53T59 392 aa10.19□□□□□ -0.78
CNTNAP3B-205ENST00000476961 ICE2Q659A1 982 aa10.19□□□□□ -0.78
CNTNAP3B-205ENST00000476961 MYRIPQ8NFW9 859 aa10.19□□□□□ -0.78
CNTNAP3B-205ENST00000476961 PANK3Q9H999 370 aa10.19□□□□□ -0.78
CNTNAP3B-205ENST00000476961 SPINK5Q9NQ38 1064 aaPredicted RBP10.19□□□□□ -0.78
CNTNAP3B-205ENST00000476961 TULP4Q9NRJ4 1543 aa10.18□□□□□ -0.78
CNTNAP3B-205ENST00000476961 PLEKHH1Q9ULM0 1364 aa10.18□□□□□ -0.78
CNTNAP3B-205ENST00000476961 CCDC189A1A4V9 331 aa10.18□□□□□ -0.78
CNTNAP3B-205ENST00000476961 KIF1CO43896 1103 aaKnown RBP10.18□□□□□ -0.78
CNTNAP3B-205ENST00000476961 ZNF853P0CG23 659 aa10.18□□□□□ -0.78
CNTNAP3B-205ENST00000476961 KDM4FA0A1W2PPD8 638 aa10.18□□□□□ -0.78
CNTNAP3B-205ENST00000476961 GUCY2CP25092 1073 aa10.18□□□□□ -0.78
CNTNAP3B-205ENST00000476961 WAPLQ7Z5K2 1190 aa10.18□□□□□ -0.78
CNTNAP3B-205ENST00000476961 TECPR2O15040 1411 aa10.17□□□□□ -0.78
CNTNAP3B-205ENST00000476961 MYOM1P52179 1685 aa10.17□□□□□ -0.78
CNTNAP3B-205ENST00000476961 XPCQ01831 940 aaPredicted RBP10.17□□□□□ -0.78
CNTNAP3B-205ENST00000476961 RSPH14Q9UHP6 348 aa10.17□□□□□ -0.78
CNTNAP3B-205ENST00000476961 NOL7Q9UMY1 257 aaKnown RBP10.17□□□□□ -0.78
CNTNAP3B-205ENST00000476961 TBX22Q9Y458 520 aa10.17□□□□□ -0.78
CNTNAP3B-205ENST00000476961 CCDC184Q52MB2 194 aa10.17□□□□□ -0.78
CNTNAP3B-205ENST00000476961 DNAJC21Q5F1R6 531 aaKnown RBP10.17□□□□□ -0.78
CNTNAP3B-205ENST00000476961 DNAJC14Q6Y2X3 702 aaPredicted RBP10.17□□□□□ -0.78
CNTNAP3B-205ENST00000476961 ITFG2Q969R8 447 aa10.17□□□□□ -0.78
CNTNAP3B-205ENST00000476961 ANTXR1Q9H6X2 564 aa10.17□□□□□ -0.78
CNTNAP3B-205ENST00000476961 EVC2Q86UK5 1308 aa10.17□□□□□ -0.78
CNTNAP3B-205ENST00000476961 MINK1Q8N4C8 1332 aaPredicted RBP10.17□□□□□ -0.78
CNTNAP3B-205ENST00000476961 PTPRUQ92729 1446 aa10.17□□□□□ -0.78
CNTNAP3B-205ENST00000476961 TRAK2O60296 914 aa10.16□□□□□ -0.78
CNTNAP3B-205ENST00000476961 MCM4P33991 863 aa10.16□□□□□ -0.78
CNTNAP3B-205ENST00000476961 GTF2F1P35269 517 aaKnown RBP eCLIP10.16□□□□□ -0.78
CNTNAP3B-205ENST00000476961 TDO2P48775 406 aa10.16□□□□□ -0.78
CNTNAP3B-205ENST00000476961 ANKLE2Q86XL3 938 aa10.16□□□□□ -0.78
CNTNAP3B-205ENST00000476961 PNISRQ8TF01 805 aaKnown RBP10.16□□□□□ -0.78
CNTNAP3B-205ENST00000476961 CPS1P31327 1500 aa10.16□□□□□ -0.78
CNTNAP3B-205ENST00000476961 FEZ1Q99689 392 aa10.16□□□□□ -0.78
CNTNAP3B-205ENST00000476961 KNDC1Q76NI1 1749 aa10.15□□□□□ -0.78
CNTNAP3B-205ENST00000476961 FAM135BQ49AJ0 1406 aa10.15□□□□□ -0.78
CNTNAP3B-205ENST00000476961 CABP2Q9NPB3 220 aa10.15□□□□□ -0.78
CNTNAP3B-205ENST00000476961 MED4Q9NPJ6 270 aa10.15□□□□□ -0.78
CNTNAP3B-205ENST00000476961 ROBO2Q9HCK4 1378 aa10.15□□□□□ -0.79
CNTNAP3B-205ENST00000476961 MTA1Q13330 715 aa10.15□□□□□ -0.79
CNTNAP3B-205ENST00000476961 TSHZ1Q6ZSZ6 1077 aa10.15□□□□□ -0.79
CNTNAP3B-205ENST00000476961 MRVI1Q9Y6F6 885 aa10.15□□□□□ -0.79
CNTNAP3B-205ENST00000476961 DIP2AQ14689 1571 aa10.14□□□□□ -0.79
CNTNAP3B-205ENST00000476961 ZC3H12AQ5D1E8 599 aaKnown RBP10.14□□□□□ -0.79
CNTNAP3B-205ENST00000476961 RINLQ6ZS11 566 aa10.14□□□□□ -0.79
CNTNAP3B-205ENST00000476961 ANKRD23Q86SG2 305 aa10.14□□□□□ -0.79
CNTNAP3B-205ENST00000476961 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.14□□□□□ -0.79
CNTNAP3B-205ENST00000476961 NUDCQ9Y266 331 aa10.14□□□□□ -0.79
CNTNAP3B-205ENST00000476961 RAD50Q92878 1312 aa10.13□□□□□ -0.79
CNTNAP3B-205ENST00000476961 CT47B1P0C2W7 299 aaPredicted RBP10.13□□□□□ -0.79
CNTNAP3B-205ENST00000476961 SLC12A5Q9H2X9 1139 aa10.13□□□□□ -0.79
CNTNAP3B-205ENST00000476961 OGFRQ9NZT2 677 aa10.13□□□□□ -0.79
CNTNAP3B-205ENST00000476961 AMOTL2Q9Y2J4 779 aa10.13□□□□□ -0.79
CNTNAP3B-205ENST00000476961 SRPK2P78362 688 aaKnown RBP10.12□□□□□ -0.79
CNTNAP3B-205ENST00000476961 GAS2L3Q86XJ1 694 aa10.12□□□□□ -0.79
CNTNAP3B-205ENST00000476961 PDCL2Q8N4E4 241 aa10.12□□□□□ -0.79
CNTNAP3B-205ENST00000476961 MNS1Q8NEH6 495 aa10.12□□□□□ -0.79
CNTNAP3B-205ENST00000476961 CDK19Q9BWU1 502 aa10.12□□□□□ -0.79
CNTNAP3B-205ENST00000476961 CARD14Q9BXL6 1004 aa10.12□□□□□ -0.79
CNTNAP3B-205ENST00000476961 ARMCX6Q7L4S7 300 aa10.12□□□□□ -0.79
CNTNAP3B-205ENST00000476961 SUFUQ9UMX1 484 aa10.12□□□□□ -0.79
CNTNAP3B-205ENST00000476961 KLHL33A6NCF5 533 aa10.11□□□□□ -0.79
CNTNAP3B-205ENST00000476961 IPO8O15397 1037 aaKnown RBP10.11□□□□□ -0.79
CNTNAP3B-205ENST00000476961 TERF2Q15554 542 aa10.11□□□□□ -0.79
CNTNAP3B-205ENST00000476961 NCKAP5LQ9HCH0 1330 aa10.11□□□□□ -0.79
CNTNAP3B-205ENST00000476961 NPHP4O75161 1426 aaPredicted RBP10.11□□□□□ -0.79
CNTNAP3B-205ENST00000476961 MPHOSPH10O00566 681 aaKnown RBP10.11□□□□□ -0.79
CNTNAP3B-205ENST00000476961 PPP1R12AO14974 1030 aaPredicted RBP10.11□□□□□ -0.79
CNTNAP3B-205ENST00000476961 U2AF2P26368 475 aaKnown RBP eCLIP10.11□□□□□ -0.79
CNTNAP3B-205ENST00000476961 MCM5P33992 734 aa10.11□□□□□ -0.79
CNTNAP3B-205ENST00000476961 HSP90AB4PQ58FF6 505 aa10.11□□□□□ -0.79
CNTNAP3B-205ENST00000476961 JARID2Q92833 1246 aaPredicted RBP10.11□□□□□ -0.79
CNTNAP3B-205ENST00000476961 SLKQ9H2G2 1235 aaPredicted RBP10.11□□□□□ -0.79
CNTNAP3B-205ENST00000476961 UPF2Q9HAU5 1272 aaKnown RBP10.11□□□□□ -0.79
CNTNAP3B-205ENST00000476961 KNSTRNQ9Y448 316 aa10.11□□□□□ -0.79
CNTNAP3B-205ENST00000476961 KTN1Q86UP2 1357 aaKnown RBP10.11□□□□□ -0.79
CNTNAP3B-205ENST00000476961 PARD3Q8TEW0 1356 aa10.11□□□□□ -0.79
CNTNAP3B-205ENST00000476961 PIK3R4Q99570 1358 aa10.11□□□□□ -0.79
CNTNAP3B-205ENST00000476961 PTCH1Q13635 1447 aa10.1□□□□□ -0.79
CNTNAP3B-205ENST00000476961 PRIMPOLQ96LW4 560 aa10.1□□□□□ -0.79
CNTNAP3B-205ENST00000476961 TMX1Q9H3N1 280 aa10.1□□□□□ -0.79
CNTNAP3B-205ENST00000476961 ATAD2Q6PL18 1390 aa10.1□□□□□ -0.79
CNTNAP3B-205ENST00000476961 XRN1Q8IZH2 1706 aaKnown RBP10.1□□□□□ -0.79
CNTNAP3B-205ENST00000476961 WASLO00401 505 aaPredicted RBP10.1□□□□□ -0.79
CNTNAP3B-205ENST00000476961 TNNT1P13805 278 aa10.1□□□□□ -0.79
CNTNAP3B-205ENST00000476961 FAM161AQ3B820 660 aa10.1□□□□□ -0.79
CNTNAP3B-205ENST00000476961 C8orf34Q49A92 452 aa10.1□□□□□ -0.79
CNTNAP3B-205ENST00000476961 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.1□□□□□ -0.79
CNTNAP3B-205ENST00000476961 TSC1Q92574 1164 aa10.1□□□□□ -0.79
CNTNAP3B-205ENST00000476961 KCNA6P17658 529 aa10.09□□□□□ -0.79
CNTNAP3B-205ENST00000476961 HMGN5P82970 282 aaKnown RBP10.09□□□□□ -0.79
CNTNAP3B-205ENST00000476961 RAD51AP2Q09MP3 1159 aa10.09□□□□□ -0.79
CNTNAP3B-205ENST00000476961 BIRC2Q13490 618 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms