RNA–Protein interactions for RNA: ENST00000476825.2

SPTAN1-207, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 3

Gene SPTAN1, Length 635 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-207ENST00000476825 THRAP3Q9Y2W1 955 aaKnown RBP12.24□□□□□ -0.45
SPTAN1-207ENST00000476825 NHSQ6T4R5 1651 aa12.23□□□□□ -0.45
SPTAN1-207ENST00000476825 ONECUT3O60422 494 aaPredicted RBP12.23□□□□□ -0.45
SPTAN1-207ENST00000476825 RBM6P78332 1123 aaKnown RBP12.23□□□□□ -0.45
SPTAN1-207ENST00000476825 AEBP1Q8IUX7 1158 aa12.23□□□□□ -0.45
SPTAN1-207ENST00000476825 USP35Q9P2H5 1018 aa12.22□□□□□ -0.45
SPTAN1-207ENST00000476825 HOXD11P31277 338 aaPredicted RBP12.21□□□□□ -0.45
SPTAN1-207ENST00000476825 FAM98CQ17RN3 349 aaKnown RBP12.21□□□□□ -0.45
SPTAN1-207ENST00000476825 CCDC9Q9Y3X0 531 aaKnown RBP12.21□□□□□ -0.45
SPTAN1-207ENST00000476825 IL2RBP14784 551 aa12.2□□□□□ -0.46
SPTAN1-207ENST00000476825 MIER1Q8N108 512 aa12.2□□□□□ -0.46
SPTAN1-207ENST00000476825 RSPH6AQ9H0K4 717 aa12.2□□□□□ -0.46
SPTAN1-207ENST00000476825 PAPPAQ13219 1627 aa12.19□□□□□ -0.46
SPTAN1-207ENST00000476825 BTAF1O14981 1849 aa12.19□□□□□ -0.46
SPTAN1-207ENST00000476825 CCER2I3L3R5 266 aa12.19□□□□□ -0.46
SPTAN1-207ENST00000476825 HMOX1P09601 288 aa12.19□□□□□ -0.46
SPTAN1-207ENST00000476825 RXRBP28702 533 aa12.19□□□□□ -0.46
SPTAN1-207ENST00000476825 SULT6B1Q6IMI4 303 aa12.19□□□□□ -0.46
SPTAN1-207ENST00000476825 CDCA7Q9BWT1 371 aaPredicted RBP12.19□□□□□ -0.46
SPTAN1-207ENST00000476825 MRS2Q9HD23 443 aa12.19□□□□□ -0.46
SPTAN1-207ENST00000476825 U2SURPO15042 1029 aaKnown RBP12.18□□□□□ -0.46
SPTAN1-207ENST00000476825 NUDCQ9Y266 331 aa12.18□□□□□ -0.46
SPTAN1-207ENST00000476825 RGPD3A6NKT7 1758 aaPredicted RBP12.18□□□□□ -0.46
SPTAN1-207ENST00000476825 RGPD4Q7Z3J3 1758 aa12.18□□□□□ -0.46
SPTAN1-207ENST00000476825 MRC1P22897 1456 aa12.17□□□□□ -0.46
SPTAN1-207ENST00000476825 SEPT12Q8IYM1 358 aa12.17□□□□□ -0.46
SPTAN1-207ENST00000476825 PNISRQ8TF01 805 aaKnown RBP12.17□□□□□ -0.46
SPTAN1-207ENST00000476825 BCL9O00512 1426 aa12.17□□□□□ -0.46
SPTAN1-207ENST00000476825 UBR2Q8IWV8 1755 aa12.16□□□□□ -0.46
SPTAN1-207ENST00000476825 U2AF1L5P0DN76 240 aaPredicted RBP12.16□□□□□ -0.46
SPTAN1-207ENST00000476825 TATP17735 454 aaPredicted RBP12.16□□□□□ -0.46
SPTAN1-207ENST00000476825 PRKAR2BP31323 418 aa12.16□□□□□ -0.46
SPTAN1-207ENST00000476825 U2AF1Q01081 240 aaKnown RBP eCLIP12.16□□□□□ -0.46
SPTAN1-207ENST00000476825 RAPGEF4Q8WZA2 1011 aa12.16□□□□□ -0.46
SPTAN1-207ENST00000476825 PLEKHF1Q96S99 279 aa12.16□□□□□ -0.46
SPTAN1-207ENST00000476825 KDM3BQ7LBC6 1761 aa12.15□□□□□ -0.46
SPTAN1-207ENST00000476825 LY75O60449 1722 aa12.15□□□□□ -0.46
SPTAN1-207ENST00000476825 KDM6AO15550 1401 aaPredicted RBP12.15□□□□□ -0.46
SPTAN1-207ENST00000476825 DCAF8L1A6NGE4 600 aa12.15□□□□□ -0.46
SPTAN1-207ENST00000476825 FCHSD2O94868 740 aa12.15□□□□□ -0.46
SPTAN1-207ENST00000476825 CNKSR2Q8WXI2 1034 aa12.15□□□□□ -0.46
SPTAN1-207ENST00000476825 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.15□□□□□ -0.464e-7■□□□□ 9.7
SPTAN1-207ENST00000476825 ADAMTS8Q9UP79 889 aa12.15□□□□□ -0.46
SPTAN1-207ENST00000476825 CACNB1Q02641 598 aaPredicted RBP12.14□□□□□ -0.47
SPTAN1-207ENST00000476825 DDB1Q16531 1140 aa12.14□□□□□ -0.47
SPTAN1-207ENST00000476825 PCDH11XQ9BZA7 1347 aa12.13□□□□□ -0.47
SPTAN1-207ENST00000476825 PCDH11YQ9BZA8 1340 aa12.13□□□□□ -0.47
SPTAN1-207ENST00000476825 CICQ96RK0 1608 aaPredicted RBP12.13□□□□□ -0.47
SPTAN1-207ENST00000476825 CYP27B1O15528 508 aa12.13□□□□□ -0.47
SPTAN1-207ENST00000476825 WDR43Q15061 677 aaKnown RBP eCLIP12.13□□□□□ -0.47
SPTAN1-207ENST00000476825 MARCH10Q8NA82 808 aaPredicted RBP12.13□□□□□ -0.47
SPTAN1-207ENST00000476825 PHACTR3Q96KR7 559 aa12.13□□□□□ -0.47
SPTAN1-207ENST00000476825 KAT6BQ8WYB5 2073 aa12.13□□□□□ -0.47
SPTAN1-207ENST00000476825 RREB1Q92766 1687 aa12.13□□□□□ -0.47
SPTAN1-207ENST00000476825 MTHFSDQ2M296 383 aaKnown RBP12.12□□□□□ -0.47
SPTAN1-207ENST00000476825 ZCRB1Q8TBF4 217 aaKnown RBP12.12□□□□□ -0.47
SPTAN1-207ENST00000476825 TAF1LQ8IZX4 1826 aa12.11□□□□□ -0.47
SPTAN1-207ENST00000476825 ZNF831Q5JPB2 1677 aa12.11□□□□□ -0.47
SPTAN1-207ENST00000476825 A0A0G2JS52 829 aa12.11□□□□□ -0.47
SPTAN1-207ENST00000476825 EXOC5O00471 708 aa12.11□□□□□ -0.47
SPTAN1-207ENST00000476825 PHKG2P15735 406 aa12.11□□□□□ -0.47
SPTAN1-207ENST00000476825 MYT1Q01538 1121 aa12.11□□□□□ -0.47
SPTAN1-207ENST00000476825 AMOTQ4VCS5 1084 aa12.11□□□□□ -0.47
SPTAN1-207ENST00000476825 KRT27Q7Z3Y8 459 aa12.11□□□□□ -0.47
SPTAN1-207ENST00000476825 SPG7Q9UQ90 795 aa12.11□□□□□ -0.47
SPTAN1-207ENST00000476825 MAP3K5Q99683 1374 aa12.1□□□□□ -0.47
SPTAN1-207ENST00000476825 NKX1-1Q15270 411 aaPredicted RBP12.1□□□□□ -0.47
SPTAN1-207ENST00000476825 PLEKHO1Q53GL0 409 aaPredicted RBP12.1□□□□□ -0.47
SPTAN1-207ENST00000476825 CCDC146Q8IYE0 955 aa12.1□□□□□ -0.47
SPTAN1-207ENST00000476825 COL5A3P25940 1745 aaPredicted RBP12.09□□□□□ -0.47
SPTAN1-207ENST00000476825 ZNF530Q6P9A1 599 aaPredicted RBP12.09□□□□□ -0.47
SPTAN1-207ENST00000476825 GAS2L2Q8NHY3 880 aa12.09□□□□□ -0.47
SPTAN1-207ENST00000476825 RUNDC1Q96C34 613 aa12.09□□□□□ -0.47
SPTAN1-207ENST00000476825 LAMB4A4D0S4 1761 aa12.09□□□□□ -0.47
SPTAN1-207ENST00000476825 TJP1Q07157 1748 aa12.08□□□□□ -0.47
SPTAN1-207ENST00000476825 NUP188Q5SRE5 1749 aa12.08□□□□□ -0.47
SPTAN1-207ENST00000476825 EP400Q96L91 3159 aa12.08□□□□□ -0.48
SPTAN1-207ENST00000476825 CEMIPQ8WUJ3 1361 aa12.08□□□□□ -0.48
SPTAN1-207ENST00000476825 C5P01031 1676 aa12.08□□□□□ -0.48
SPTAN1-207ENST00000476825 PDE3BQ13370 1112 aa12.08□□□□□ -0.48
SPTAN1-207ENST00000476825 FAM182BQ5T319 152 aa12.08□□□□□ -0.48
SPTAN1-207ENST00000476825 IFNL2Q8IZJ0 200 aa12.08□□□□□ -0.48
SPTAN1-207ENST00000476825 MAPK8IP3Q9UPT6 1336 aa12.08□□□□□ -0.48
SPTAN1-207ENST00000476825 NFE2L2Q16236 605 aa12.07□□□□□ -0.48
SPTAN1-207ENST00000476825 AKAP4Q5JQC9 854 aa12.07□□□□□ -0.48
SPTAN1-207ENST00000476825 FAM9BQ8IZU0 186 aa12.07□□□□□ -0.48
SPTAN1-207ENST00000476825 DDX54Q8TDD1 881 aaKnown RBP12.07□□□□□ -0.48
SPTAN1-207ENST00000476825 PNNQ9H307 717 aaKnown RBP12.07□□□□□ -0.48
SPTAN1-207ENST00000476825 RNF216Q9NWF9 866 aaPredicted RBP12.07□□□□□ -0.48
SPTAN1-207ENST00000476825 TMPOP42166 694 aaKnown RBP12.06□□□□□ -0.48
SPTAN1-207ENST00000476825 TUBGCP6Q96RT7 1819 aa12.05□□□□□ -0.48
SPTAN1-207ENST00000476825 KCPQ6ZWJ8 1503 aa12.05□□□□□ -0.48
SPTAN1-207ENST00000476825 GNAT3A8MTJ3 354 aa12.04□□□□□ -0.48
SPTAN1-207ENST00000476825 APAF1O14727 1248 aa12.04□□□□□ -0.48
SPTAN1-207ENST00000476825 HSP90AB1P08238 724 aaKnown RBP12.04□□□□□ -0.48
SPTAN1-207ENST00000476825 C1orf141Q5JVX7 400 aa12.04□□□□□ -0.48
SPTAN1-207ENST00000476825 FAM196AQ6ZSG2 479 aa12.04□□□□□ -0.48
SPTAN1-207ENST00000476825 DCAF5Q96JK2 942 aa12.04□□□□□ -0.48
SPTAN1-207ENST00000476825 RNMTO43148 476 aaKnown RBP12.03□□□□□ -0.48
SPTAN1-207ENST00000476825 HTATSF1O43719 755 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms