RNA–Protein interactions for RNA: ENST00000476792.1

LIMK1-204, Transcript of LIM domain kinase 1, humanhuman

TSL 2

Gene LIMK1, Length 785 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-204ENST00000476792 LRP5O75197 1615 aa29.38■■■□□ 2.29
LIMK1-204ENST00000476792 ANO8Q9HCE9 1232 aaPredicted RBP29.38■■■□□ 2.29
LIMK1-204ENST00000476792 SRCAPQ6ZRS2 3230 aa29.37■■■□□ 2.29
LIMK1-204ENST00000476792 MAP2P11137 1827 aaKnown RBP29.37■■■□□ 2.29
LIMK1-204ENST00000476792 TATP17735 454 aaPredicted RBP29.37■■■□□ 2.29
LIMK1-204ENST00000476792 SYTL4Q96C24 671 aaPredicted RBP29.37■■■□□ 2.29
LIMK1-204ENST00000476792 POLKQ9UBT6 870 aa29.37■■■□□ 2.29
LIMK1-204ENST00000476792 WASHC2AQ641Q2 1341 aa29.34■■■□□ 2.29
LIMK1-204ENST00000476792 PRIM1P49642 420 aaKnown RBP29.33■■■□□ 2.29
LIMK1-204ENST00000476792 KIF7Q2M1P5 1343 aa29.33■■■□□ 2.29
LIMK1-204ENST00000476792 BTAF1O14981 1849 aa29.33■■■□□ 2.29
LIMK1-204ENST00000476792 ANKRD26Q9UPS8 1709 aa29.31■■■□□ 2.28
LIMK1-204ENST00000476792 STK32BQ9NY57 414 aa29.31■■■□□ 2.28
LIMK1-204ENST00000476792 KNSTRNQ9Y448 316 aa29.31■■■□□ 2.28
LIMK1-204ENST00000476792 SHANK3Q9BYB0 1731 aa29.31■■■□□ 2.28
LIMK1-204ENST00000476792 MORC1Q86VD1 984 aa29.3■■■□□ 2.28
LIMK1-204ENST00000476792 EYA1Q99502 592 aa29.28■■■□□ 2.28
LIMK1-204ENST00000476792 NSD2O96028 1365 aa29.26■■■□□ 2.28
LIMK1-204ENST00000476792 DOT1LQ8TEK3 1739 aa29.26■■■□□ 2.27
LIMK1-204ENST00000476792 PDGFDQ9GZP0 370 aaPredicted RBP29.26■■■□□ 2.27
LIMK1-204ENST00000476792 PCDH11XQ9BZA7 1347 aa29.25■■■□□ 2.27
LIMK1-204ENST00000476792 PCDH11YQ9BZA8 1340 aa29.25■■■□□ 2.27
LIMK1-204ENST00000476792 EIF4A2Q14240 407 aaKnown RBP29.25■■■□□ 2.27
LIMK1-204ENST00000476792 SLC15A2Q16348 729 aa29.25■■■□□ 2.27
LIMK1-204ENST00000476792 SPON1Q9HCB6 807 aa29.24■■■□□ 2.27
LIMK1-204ENST00000476792 LRRC4BQ9NT99 713 aa29.22■■■□□ 2.27
LIMK1-204ENST00000476792 CYP27B1O15528 508 aa29.21■■■□□ 2.27
LIMK1-204ENST00000476792 KCNQ4P56696 695 aa29.21■■■□□ 2.27
LIMK1-204ENST00000476792 ZBTB7AO95365 584 aa29.2■■■□□ 2.26
LIMK1-204ENST00000476792 PPP1R1BQ9UD71 204 aaPredicted RBP29.19■■■□□ 2.26
LIMK1-204ENST00000476792 SPG7Q9UQ90 795 aa29.19■■■□□ 2.26
LIMK1-204ENST00000476792 NCAPD2Q15021 1401 aa29.19■■■□□ 2.26
LIMK1-204ENST00000476792 AMER1Q5JTC6 1135 aaPredicted RBP29.18■■■□□ 2.26
LIMK1-204ENST00000476792 ZNF827Q17R98 1081 aa29.17■■■□□ 2.26
LIMK1-204ENST00000476792 SLC27A3Q5K4L6 730 aa29.16■■■□□ 2.26
LIMK1-204ENST00000476792 ATF5Q9Y2D1 282 aaPredicted RBP29.16■■■□□ 2.26
LIMK1-204ENST00000476792 CASZ1Q86V15 1759 aa29.16■■■□□ 2.26
LIMK1-204ENST00000476792 CNGB1Q14028 1251 aaPredicted RBP29.15■■■□□ 2.26
LIMK1-204ENST00000476792 MPRIPQ6WCQ1 1025 aa29.15■■■□□ 2.26
LIMK1-204ENST00000476792 CC2D1BQ5T0F9 858 aaKnown RBP29.13■■■□□ 2.25
LIMK1-204ENST00000476792 CCNL1Q9UK58 526 aaPredicted RBP29.13■■■□□ 2.25
LIMK1-204ENST00000476792 PKD1L3Q7Z443 1732 aa29.13■■■□□ 2.25
LIMK1-204ENST00000476792 PAPPAQ13219 1627 aa29.12■■■□□ 2.25
LIMK1-204ENST00000476792 IGSF1Q8N6C5 1336 aa29.11■■■□□ 2.25
LIMK1-204ENST00000476792 PER1O15534 1290 aaPredicted RBP29.1■■■□□ 2.25
LIMK1-204ENST00000476792 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.1■■■□□ 2.25
LIMK1-204ENST00000476792 AKT1S1Q96B36 256 aa29.09■■■□□ 2.25
LIMK1-204ENST00000476792 NKX1-1Q15270 411 aaPredicted RBP29.08■■■□□ 2.25
LIMK1-204ENST00000476792 LY75O60449 1722 aa29.07■■■□□ 2.24
LIMK1-204ENST00000476792 IFNL2Q8IZJ0 200 aa29.07■■■□□ 2.24
LIMK1-204ENST00000476792 TOGARAM1Q9Y4F4 1720 aa29.06■■■□□ 2.24
LIMK1-204ENST00000476792 PHKG2P15735 406 aa29.06■■■□□ 2.24
LIMK1-204ENST00000476792 AEBP1Q8IUX7 1158 aa29.06■■■□□ 2.24
LIMK1-204ENST00000476792 MTFR1LQ9H019 292 aa29.06■■■□□ 2.24
LIMK1-204ENST00000476792 TFCP2L1Q9NZI6 479 aa29.06■■■□□ 2.24
LIMK1-204ENST00000476792 MTHFSP49914 203 aa29.05■■■□□ 2.24
LIMK1-204ENST00000476792 PIGBQ92521 554 aa29.05■■■□□ 2.24
LIMK1-204ENST00000476792 PALLDQ8WX93 1383 aa29.04■■■□□ 2.24
LIMK1-204ENST00000476792 PTGER2P43116 358 aa29.04■■■□□ 2.24
LIMK1-204ENST00000476792 ITGB4P16144 1822 aa29.04■■■□□ 2.24
LIMK1-204ENST00000476792 PLEKHO1Q53GL0 409 aaPredicted RBP29.03■■■□□ 2.24
LIMK1-204ENST00000476792 IL13P35225 146 aa29.02■■■□□ 2.24
LIMK1-204ENST00000476792 SULT6B1Q6IMI4 303 aa29.02■■■□□ 2.24
LIMK1-204ENST00000476792 TMOD3Q9NYL9 352 aa29.02■■■□□ 2.24
LIMK1-204ENST00000476792 SMARCC1Q92922 1105 aaPredicted RBP29.01■■■□□ 2.23
LIMK1-204ENST00000476792 PNPLA7Q6ZV29 1317 aa29■■■□□ 2.23
LIMK1-204ENST00000476792 ZNF530Q6P9A1 599 aaPredicted RBP28.99■■■□□ 2.23
LIMK1-204ENST00000476792 MSH5O43196 834 aa28.97■■■□□ 2.23
LIMK1-204ENST00000476792 AMOTQ4VCS5 1084 aa28.96■■■□□ 2.23
LIMK1-204ENST00000476792 SGIP1Q9BQI5 828 aa28.95■■■□□ 2.22
LIMK1-204ENST00000476792 ASAP1Q9ULH1 1129 aa28.95■■■□□ 2.22
LIMK1-204ENST00000476792 TUBGCP6Q96RT7 1819 aa28.94■■■□□ 2.22
LIMK1-204ENST00000476792 PLEKHG2Q9H7P9 1386 aa28.94■■■□□ 2.22
LIMK1-204ENST00000476792 HSP90AB1P08238 724 aaKnown RBP28.94■■■□□ 2.22
LIMK1-204ENST00000476792 HMOX1P09601 288 aa28.93■■■□□ 2.22
LIMK1-204ENST00000476792 C1orf141Q5JVX7 400 aa28.93■■■□□ 2.22
LIMK1-204ENST00000476792 SLC16A10Q8TF71 515 aa28.93■■■□□ 2.22
LIMK1-204ENST00000476792 NPC1L1Q9UHC9 1359 aa28.92■■■□□ 2.22
LIMK1-204ENST00000476792 DCAF5Q96JK2 942 aa28.92■■■□□ 2.22
LIMK1-204ENST00000476792 ARXQ96QS3 562 aa28.92■■■□□ 2.22
LIMK1-204ENST00000476792 QSER1Q2KHR3 1735 aa28.91■■■□□ 2.22
LIMK1-204ENST00000476792 C5P01031 1676 aa28.91■■■□□ 2.22
LIMK1-204ENST00000476792 DIAPH1O60610 1272 aaKnown RBP28.91■■■□□ 2.22
LIMK1-204ENST00000476792 COL23A1Q86Y22 540 aaPredicted RBP28.91■■■□□ 2.22
LIMK1-204ENST00000476792 FHDC1Q9C0D6 1143 aaPredicted RBP28.91■■■□□ 2.22
LIMK1-204ENST00000476792 KDRP35968 1356 aa28.9■■■□□ 2.22
LIMK1-204ENST00000476792 LOC102724428A0A0B4J2F2 783 aa28.9■■■□□ 2.22
LIMK1-204ENST00000476792 SIK1P57059 783 aa28.9■■■□□ 2.22
LIMK1-204ENST00000476792 ATG3Q9NT62 314 aa28.9■■■□□ 2.22
LIMK1-204ENST00000476792 ERVV-2B6SEH9 535 aa28.89■■■□□ 2.22
LIMK1-204ENST00000476792 CABP4P57796 275 aa28.89■■■□□ 2.22
LIMK1-204ENST00000476792 DCAF8L1A6NGE4 600 aa28.88■■■□□ 2.21
LIMK1-204ENST00000476792 HMGB2P26583 209 aaKnown RBP28.88■■■□□ 2.21
LIMK1-204ENST00000476792 POLD1P28340 1107 aa28.88■■■□□ 2.21
LIMK1-204ENST00000476792 AK7Q96M32 723 aa28.88■■■□□ 2.21
LIMK1-204ENST00000476792 TAF1LQ8IZX4 1826 aa28.87■■■□□ 2.21
LIMK1-204ENST00000476792 KDM6AO15550 1401 aaPredicted RBP28.87■■■□□ 2.21
LIMK1-204ENST00000476792 KLHL34Q8N239 644 aa28.87■■■□□ 2.21
LIMK1-204ENST00000476792 SYT17Q9BSW7 474 aa28.87■■■□□ 2.21
LIMK1-204ENST00000476792 ATP6V1AP38606 617 aa28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms