RNA–Protein interactions for RNA: ENST00000476640.1

HMGCS2-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 3

Gene HMGCS2, Length 857 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-203ENST00000476640 PDGFDQ9GZP0 370 aaPredicted RBP18.59■□□□□ 0.57
HMGCS2-203ENST00000476640 ATF5Q9Y2D1 282 aaPredicted RBP18.59■□□□□ 0.57
HMGCS2-203ENST00000476640 FLT4P35916 1363 aa18.58■□□□□ 0.57
HMGCS2-203ENST00000476640 SYTL4Q96C24 671 aaPredicted RBP18.58■□□□□ 0.56
HMGCS2-203ENST00000476640 MEGF6O75095 1541 aa18.58■□□□□ 0.56
HMGCS2-203ENST00000476640 MAP2P11137 1827 aaKnown RBP18.58■□□□□ 0.56
HMGCS2-203ENST00000476640 INSRP06213 1382 aa18.57■□□□□ 0.56
HMGCS2-203ENST00000476640 PTGER2P43116 358 aa18.57■□□□□ 0.56
HMGCS2-203ENST00000476640 NBPF6Q5VWK0 638 aa18.56■□□□□ 0.56
HMGCS2-203ENST00000476640 NBPF4Q96M43 638 aa18.56■□□□□ 0.56
HMGCS2-203ENST00000476640 ANKRD26Q9UPS8 1709 aa18.55■□□□□ 0.56
HMGCS2-203ENST00000476640 TATP17735 454 aaPredicted RBP18.55■□□□□ 0.56
HMGCS2-203ENST00000476640 YY1P25490 414 aa18.55■□□□□ 0.56
HMGCS2-203ENST00000476640 PRIM1P49642 420 aaKnown RBP18.55■□□□□ 0.56
HMGCS2-203ENST00000476640 NSD3Q9BZ95 1437 aa18.55■□□□□ 0.56
HMGCS2-203ENST00000476640 TUBGCP6Q96RT7 1819 aa18.54■□□□□ 0.56
HMGCS2-203ENST00000476640 HMGB2P26583 209 aaKnown RBP18.54■□□□□ 0.56
HMGCS2-203ENST00000476640 PCGF6Q9BYE7 350 aa18.54■□□□□ 0.56
HMGCS2-203ENST00000476640 LRRC4BQ9NT99 713 aa18.54■□□□□ 0.56
HMGCS2-203ENST00000476640 SLC16A10Q8TF71 515 aa18.53■□□□□ 0.56
HMGCS2-203ENST00000476640 CHD4Q14839 1912 aa18.53■□□□□ 0.56
HMGCS2-203ENST00000476640 PCDH11XQ9BZA7 1347 aa18.52■□□□□ 0.56
HMGCS2-203ENST00000476640 PCDH11YQ9BZA8 1340 aa18.52■□□□□ 0.56
HMGCS2-203ENST00000476640 ZNF827Q17R98 1081 aa18.52■□□□□ 0.56
HMGCS2-203ENST00000476640 HSP90AB2PQ58FF8 381 aa18.52■□□□□ 0.56
HMGCS2-203ENST00000476640 USHBP1Q8N6Y0 703 aa18.52■□□□□ 0.56
HMGCS2-203ENST00000476640 AKT1S1Q96B36 256 aa18.51■□□□□ 0.55
HMGCS2-203ENST00000476640 CARD14Q9BXL6 1004 aa18.51■□□□□ 0.55
HMGCS2-203ENST00000476640 FHDC1Q9C0D6 1143 aaPredicted RBP18.51■□□□□ 0.55
HMGCS2-203ENST00000476640 COL24A1Q17RW2 1714 aa18.51■□□□□ 0.55
HMGCS2-203ENST00000476640 PKD1L3Q7Z443 1732 aa18.51■□□□□ 0.55
HMGCS2-203ENST00000476640 ITGB4P16144 1822 aa18.51■□□□□ 0.55
HMGCS2-203ENST00000476640 ARXQ96QS3 562 aa18.5■□□□□ 0.55
HMGCS2-203ENST00000476640 SGIP1Q9BQI5 828 aa18.5■□□□□ 0.55
HMGCS2-203ENST00000476640 SYT17Q9BSW7 474 aa18.5■□□□□ 0.55
HMGCS2-203ENST00000476640 TFCP2L1Q9NZI6 479 aa18.5■□□□□ 0.55
HMGCS2-203ENST00000476640 NSD2O96028 1365 aa18.5■□□□□ 0.55
HMGCS2-203ENST00000476640 C5P01031 1676 aa18.49■□□□□ 0.55
HMGCS2-203ENST00000476640 MAP3K5Q99683 1374 aa18.48■□□□□ 0.55
HMGCS2-203ENST00000476640 POLD1P28340 1107 aa18.48■□□□□ 0.55
HMGCS2-203ENST00000476640 CCNL1Q9UK58 526 aaPredicted RBP18.48■□□□□ 0.55
HMGCS2-203ENST00000476640 TAF1LQ8IZX4 1826 aa18.48■□□□□ 0.55
HMGCS2-203ENST00000476640 PPM1GO15355 546 aaPredicted RBP18.47■□□□□ 0.55
HMGCS2-203ENST00000476640 EMILIN1Q9Y6C2 1016 aa18.47■□□□□ 0.55
HMGCS2-203ENST00000476640 PNPLA7Q6ZV29 1317 aa18.46■□□□□ 0.55
HMGCS2-203ENST00000476640 EIF4G2P78344 907 aaKnown RBP eCLIP18.45■□□□□ 0.54
HMGCS2-203ENST00000476640 POLR3GLQ9BT43 218 aa18.45■□□□□ 0.54
HMGCS2-203ENST00000476640 WASHC2AQ641Q2 1341 aa18.45■□□□□ 0.54
HMGCS2-203ENST00000476640 NCAPD2Q15021 1401 aa18.44■□□□□ 0.54
HMGCS2-203ENST00000476640 SPG7Q9UQ90 795 aa18.44■□□□□ 0.54
HMGCS2-203ENST00000476640 TOGARAM1Q9Y4F4 1720 aa18.43■□□□□ 0.54
HMGCS2-203ENST00000476640 KCNQ4P56696 695 aa18.43■□□□□ 0.54
HMGCS2-203ENST00000476640 SMARCC1Q92922 1105 aaPredicted RBP18.42■□□□□ 0.54
HMGCS2-203ENST00000476640 CYP27B1O15528 508 aa18.41■□□□□ 0.54
HMGCS2-203ENST00000476640 MSH5O43196 834 aa18.41■□□□□ 0.54
HMGCS2-203ENST00000476640 MPRIPQ6WCQ1 1025 aa18.41■□□□□ 0.54
HMGCS2-203ENST00000476640 PALLDQ8WX93 1383 aa18.41■□□□□ 0.54
HMGCS2-203ENST00000476640 FLAD1Q8NFF5 587 aa18.4■□□□□ 0.54
HMGCS2-203ENST00000476640 CCER1Q8TC90 406 aaPredicted RBP18.4■□□□□ 0.54
HMGCS2-203ENST00000476640 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.4■□□□□ 0.54
HMGCS2-203ENST00000476640 PLEKHG2Q9H7P9 1386 aa18.4■□□□□ 0.54
HMGCS2-203ENST00000476640 KLHL34Q8N239 644 aa18.39■□□□□ 0.53
HMGCS2-203ENST00000476640 POLKQ9UBT6 870 aa18.39■□□□□ 0.53
HMGCS2-203ENST00000476640 C4BP0C0L5 1744 aa18.38■□□□□ 0.53
HMGCS2-203ENST00000476640 HSPA5P11021 654 aaKnown RBP18.38■□□□□ 0.53
HMGCS2-203ENST00000476640 NKX1-1Q15270 411 aaPredicted RBP18.38■□□□□ 0.53
HMGCS2-203ENST00000476640 EYA1Q99502 592 aa18.38■□□□□ 0.53
HMGCS2-203ENST00000476640 GPR162Q16538 588 aa18.37■□□□□ 0.53
HMGCS2-203ENST00000476640 UBR3Q6ZT12 1888 aa18.37■□□□□ 0.53
HMGCS2-203ENST00000476640 TNNT2P45379 298 aaPredicted RBP18.36■□□□□ 0.53
HMGCS2-203ENST00000476640 COL23A1Q86Y22 540 aaPredicted RBP18.36■□□□□ 0.53
HMGCS2-203ENST00000476640 IFNL2Q8IZJ0 200 aa18.35■□□□□ 0.53
HMGCS2-203ENST00000476640 PANK3Q9H999 370 aa18.35■□□□□ 0.53
HMGCS2-203ENST00000476640 AK7Q96M32 723 aa18.34■□□□□ 0.53
HMGCS2-203ENST00000476640 TMOD3Q9NYL9 352 aa18.34■□□□□ 0.53
HMGCS2-203ENST00000476640 EIF4A2Q14240 407 aaKnown RBP18.33■□□□□ 0.52
HMGCS2-203ENST00000476640 PIGBQ92521 554 aa18.33■□□□□ 0.52
HMGCS2-203ENST00000476640 PHKG2P15735 406 aa18.31■□□□□ 0.52
HMGCS2-203ENST00000476640 PELP1Q8IZL8 1130 aaKnown RBP18.31■□□□□ 0.52
HMGCS2-203ENST00000476640 IGSF1Q8N6C5 1336 aa18.3■□□□□ 0.52
HMGCS2-203ENST00000476640 HSP90AB1P08238 724 aaKnown RBP18.3■□□□□ 0.52
HMGCS2-203ENST00000476640 MORC1Q86VD1 984 aa18.3■□□□□ 0.52
HMGCS2-203ENST00000476640 ZNF784Q8NCA9 323 aaPredicted RBP18.3■□□□□ 0.52
HMGCS2-203ENST00000476640 KNSTRNQ9Y448 316 aa18.3■□□□□ 0.52
HMGCS2-203ENST00000476640 ZNF831Q5JPB2 1677 aa18.29■□□□□ 0.52
HMGCS2-203ENST00000476640 LOC102724428A0A0B4J2F2 783 aa18.29■□□□□ 0.52
HMGCS2-203ENST00000476640 SIK1P57059 783 aa18.29■□□□□ 0.52
HMGCS2-203ENST00000476640 MSL1Q68DK7 614 aa18.29■□□□□ 0.52
HMGCS2-203ENST00000476640 PLEKHO1Q53GL0 409 aaPredicted RBP18.28■□□□□ 0.52
HMGCS2-203ENST00000476640 UTRNP46939 3433 aa18.28■□□□□ 0.52
HMGCS2-203ENST00000476640 GRIN3BO60391 1043 aa18.27■□□□□ 0.52
HMGCS2-203ENST00000476640 SSFA2P28290 1259 aa18.27■□□□□ 0.52
HMGCS2-203ENST00000476640 AMOTQ4VCS5 1084 aa18.27■□□□□ 0.52
HMGCS2-203ENST00000476640 NLGN2Q8NFZ4 835 aa18.27■□□□□ 0.52
HMGCS2-203ENST00000476640 CD2APQ9Y5K6 639 aa18.27■□□□□ 0.52
HMGCS2-203ENST00000476640 ERVV-2B6SEH9 535 aa18.26■□□□□ 0.51
HMGCS2-203ENST00000476640 DCAF5Q96JK2 942 aa18.26■□□□□ 0.51
HMGCS2-203ENST00000476640 ASAP1Q9ULH1 1129 aa18.26■□□□□ 0.51
HMGCS2-203ENST00000476640 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.25■□□□□ 0.51
HMGCS2-203ENST00000476640 PHF14O94880 888 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms