RNA–Protein interactions for RNA: ENST00000476558.7

CCDC7-206, Transcript of coiled-coil domain containing 7, humanhuman

TSL 2

Gene CCDC7, Length 1,819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-206ENST00000476558 C8orf58Q8NAV2 365 aa29.56■■■□□ 2.32
CCDC7-206ENST00000476558 NBPF4Q96M43 638 aa29.56■■■□□ 2.32
CCDC7-206ENST00000476558 NCAPD2Q15021 1401 aa29.55■■■□□ 2.32
CCDC7-206ENST00000476558 DDX17Q92841 729 aaKnown RBP29.55■■■□□ 2.32
CCDC7-206ENST00000476558 RGPD2P0DJD1 1756 aa29.55■■■□□ 2.32
CCDC7-206ENST00000476558 LRRC37A3O60309 1634 aa29.55■■■□□ 2.32
CCDC7-206ENST00000476558 MVPQ14764 893 aaKnown RBP29.54■■■□□ 2.32
CCDC7-206ENST00000476558 TWISTNBQ3B726 338 aaPredicted RBP29.54■■■□□ 2.32
CCDC7-206ENST00000476558 MRPL50Q8N5N7 158 aaKnown RBP29.52■■■□□ 2.32
CCDC7-206ENST00000476558 IPO8O15397 1037 aaKnown RBP29.52■■■□□ 2.32
CCDC7-206ENST00000476558 RTF1Q92541 710 aaKnown RBP29.52■■■□□ 2.32
CCDC7-206ENST00000476558 KIAA0232Q92628 1395 aa29.51■■■□□ 2.32
CCDC7-206ENST00000476558 TNS3Q68CZ2 1445 aa29.51■■■□□ 2.31
CCDC7-206ENST00000476558 USHBP1Q8N6Y0 703 aa29.51■■■□□ 2.31
CCDC7-206ENST00000476558 CAMTA1Q9Y6Y1 1673 aa29.51■■■□□ 2.31
CCDC7-206ENST00000476558 FTSJ3Q8IY81 847 aaKnown RBP29.5■■■□□ 2.31
CCDC7-206ENST00000476558 GNAT3A8MTJ3 354 aa29.49■■■□□ 2.31
CCDC7-206ENST00000476558 BRINP3Q76B58 766 aa29.49■■■□□ 2.31
CCDC7-206ENST00000476558 ARHGAP45Q92619 1136 aa29.49■■■□□ 2.31
CCDC7-206ENST00000476558 ZBTB7CA1YPR0 619 aa29.48■■■□□ 2.31
CCDC7-206ENST00000476558 ELL2O00472 640 aaPredicted RBP29.48■■■□□ 2.31
CCDC7-206ENST00000476558 TCERG1O14776 1098 aaKnown RBP29.48■■■□□ 2.31
CCDC7-206ENST00000476558 AXIN2Q9Y2T1 843 aa29.48■■■□□ 2.31
CCDC7-206ENST00000476558 CRYBG1Q9Y4K1 1723 aa29.48■■■□□ 2.31
CCDC7-206ENST00000476558 SPATA31A3Q5VYP0 1347 aa29.48■■■□□ 2.31
CCDC7-206ENST00000476558 MAP3K5Q99683 1374 aa29.48■■■□□ 2.31
CCDC7-206ENST00000476558 IGHDP01880 384 aa29.46■■■□□ 2.31
CCDC7-206ENST00000476558 LRRC59Q96AG4 307 aaKnown RBP29.46■■■□□ 2.31
CCDC7-206ENST00000476558 RGPD5Q99666 1765 aa29.46■■■□□ 2.31
CCDC7-206ENST00000476558 ANKRD24Q8TF21 1146 aa29.45■■■□□ 2.31
CCDC7-206ENST00000476558 COL18A1P39060 1754 aa29.45■■■□□ 2.3
CCDC7-206ENST00000476558 IL17REQ8NFR9 667 aa29.44■■■□□ 2.3
CCDC7-206ENST00000476558 SLAIN2Q9P270 581 aa29.44■■■□□ 2.3
CCDC7-206ENST00000476558 PCDHB15Q9Y5E8 787 aa29.43■■■□□ 2.3
CCDC7-206ENST00000476558 LMO7Q8WWI1 1683 aa29.43■■■□□ 2.3
CCDC7-206ENST00000476558 PLEKHG5O94827 1062 aa29.43■■■□□ 2.3
CCDC7-206ENST00000476558 HAP1P54257 671 aaPredicted RBP29.43■■■□□ 2.3
CCDC7-206ENST00000476558 TMEM57Q8N5G2 664 aa29.42■■■□□ 2.3
CCDC7-206ENST00000476558 DDX19BQ9UMR2 479 aa29.42■■■□□ 2.3
CCDC7-206ENST00000476558 ZC3H6P61129 1189 aaKnown RBP29.41■■■□□ 2.3
CCDC7-206ENST00000476558 KRT24Q2M2I5 525 aa29.41■■■□□ 2.3
CCDC7-206ENST00000476558 ABCC6O95255 1503 aa29.4■■■□□ 2.3
CCDC7-206ENST00000476558 BABAM1Q9NWV8 329 aa29.4■■■□□ 2.3
CCDC7-206ENST00000476558 MIS18AQ9NYP9 233 aa29.4■■■□□ 2.3
CCDC7-206ENST00000476558 CEMIPQ8WUJ3 1361 aa29.39■■■□□ 2.3
CCDC7-206ENST00000476558 ERBB3P21860 1342 aa29.39■■■□□ 2.3
CCDC7-206ENST00000476558 TSPYL4Q9UJ04 414 aa29.39■■■□□ 2.3
CCDC7-206ENST00000476558 SOS2Q07890 1332 aaPredicted RBP29.38■■■□□ 2.29
CCDC7-206ENST00000476558 SKAP1Q86WV1 359 aa29.38■■■□□ 2.29
CCDC7-206ENST00000476558 ITPRIPQ8IWB1 547 aa29.37■■■□□ 2.29
CCDC7-206ENST00000476558 CPDO75976 1380 aa29.36■■■□□ 2.29
CCDC7-206ENST00000476558 CABLES1Q8TDN4 633 aa29.36■■■□□ 2.29
CCDC7-206ENST00000476558 ABCC4O15439 1325 aa29.35■■■□□ 2.29
CCDC7-206ENST00000476558 AMOTQ4VCS5 1084 aa29.35■■■□□ 2.29
CCDC7-206ENST00000476558 ZBTB40Q9NUA8 1239 aa29.35■■■□□ 2.29
CCDC7-206ENST00000476558 TAF7Q15545 349 aaPredicted RBP29.34■■■□□ 2.29
CCDC7-206ENST00000476558 PLEKHO1Q53GL0 409 aaPredicted RBP29.34■■■□□ 2.29
CCDC7-206ENST00000476558 AKAP4Q5JQC9 854 aa29.31■■■□□ 2.28
CCDC7-206ENST00000476558 API5Q9BZZ5 524 aaKnown RBP29.31■■■□□ 2.28
CCDC7-206ENST00000476558 FAM208AQ9UK61 1670 aaKnown RBP29.31■■■□□ 2.28
CCDC7-206ENST00000476558 RWDD1Q9H446 243 aaPredicted RBP29.3■■■□□ 2.28
CCDC7-206ENST00000476558 ZNF530Q6P9A1 599 aaPredicted RBP29.29■■■□□ 2.28
CCDC7-206ENST00000476558 SOS1Q07889 1333 aaPredicted RBP29.28■■■□□ 2.28
CCDC7-206ENST00000476558 NHSL1Q5SYE7 1610 aa29.28■■■□□ 2.28
CCDC7-206ENST00000476558 LGR6Q9HBX8 967 aa29.28■■■□□ 2.28
CCDC7-206ENST00000476558 RGS12O14924 1447 aa29.28■■■□□ 2.28
CCDC7-206ENST00000476558 ZBTB7BO15156 539 aaPredicted RBP29.27■■■□□ 2.28
CCDC7-206ENST00000476558 OVOS2A0A0G2JMS6 1433 aa29.27■■■□□ 2.28
CCDC7-206ENST00000476558 HDAC1Q13547 482 aaPredicted RBP29.27■■■□□ 2.28
CCDC7-206ENST00000476558 VIRMAQ69YN4 1812 aaKnown RBP29.26■■■□□ 2.27
CCDC7-206ENST00000476558 ADAMTS7Q9UKP4 1686 aa29.25■■■□□ 2.27
CCDC7-206ENST00000476558 KDM3BQ7LBC6 1761 aa29.25■■■□□ 2.27
CCDC7-206ENST00000476558 PDE4AP27815 886 aa29.24■■■□□ 2.27
CCDC7-206ENST00000476558 PTPRCP08575 1304 aa29.24■■■□□ 2.27
CCDC7-206ENST00000476558 PLEKHG2Q9H7P9 1386 aa29.24■■■□□ 2.27
CCDC7-206ENST00000476558 BACH2Q9BYV9 841 aa29.24■■■□□ 2.27
CCDC7-206ENST00000476558 CHMP4BQ9H444 224 aaKnown RBP29.24■■■□□ 2.27
CCDC7-206ENST00000476558 CHRNA2Q15822 529 aa29.23■■■□□ 2.27
CCDC7-206ENST00000476558 INTS3Q68E01 1043 aaKnown RBP29.22■■■□□ 2.27
CCDC7-206ENST00000476558 SLC4A2P04920 1241 aa29.22■■■□□ 2.27
CCDC7-206ENST00000476558 ABCA3Q99758 1704 aa29.22■■■□□ 2.27
CCDC7-206ENST00000476558 NLRP2Q9NX02 1062 aa29.22■■■□□ 2.27
CCDC7-206ENST00000476558 RNMTO43148 476 aaKnown RBP29.21■■■□□ 2.27
CCDC7-206ENST00000476558 C1orf141Q5JVX7 400 aa29.2■■■□□ 2.27
CCDC7-206ENST00000476558 CACNA1FO60840 1977 aa29.2■■■□□ 2.26
CCDC7-206ENST00000476558 MPRIPQ6WCQ1 1025 aa29.2■■■□□ 2.26
CCDC7-206ENST00000476558 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.19■■■□□ 2.26
CCDC7-206ENST00000476558 SIPA1L3O60292 1781 aaPredicted RBP29.18■■■□□ 2.26
CCDC7-206ENST00000476558 RAPGEF4Q8WZA2 1011 aa29.17■■■□□ 2.26
CCDC7-206ENST00000476558 RGS3P49796 1198 aa29.17■■■□□ 2.26
CCDC7-206ENST00000476558 MEGF6O75095 1541 aa29.16■■■□□ 2.26
CCDC7-206ENST00000476558 EIF4A1P60842 406 aaKnown RBP29.16■■■□□ 2.26
CCDC7-206ENST00000476558 CCDC30Q5VVM6 783 aa29.16■■■□□ 2.26
CCDC7-206ENST00000476558 TEFQ10587 303 aa29.15■■■□□ 2.26
CCDC7-206ENST00000476558 PDZRN3Q9UPQ7 1066 aa29.15■■■□□ 2.26
CCDC7-206ENST00000476558 G2E3Q7L622 706 aa29.15■■■□□ 2.26
CCDC7-206ENST00000476558 SMC5Q8IY18 1101 aa29.15■■■□□ 2.26
CCDC7-206ENST00000476558 CSB-PGBD3P0DP91 1061 aa29.14■■■□□ 2.26
CCDC7-206ENST00000476558 TATP17735 454 aaPredicted RBP29.14■■■□□ 2.26
CCDC7-206ENST00000476558 HOXB7P09629 217 aa29.13■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 245.2 ms