RNA–Protein interactions for RNA: ENST00000476457.5

LCK-210, Transcript of LCK proto-oncogene, Src family tyrosine kinase, humanhuman

TSL 2

Gene LCK, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCK-210ENST00000476457 COG3Q96JB2 828 aa24.68■■□□□ 1.54
LCK-210ENST00000476457 GGNBP2Q9H3C7 697 aa24.68■■□□□ 1.54
LCK-210ENST00000476457 PPP1R1BQ9UD71 204 aaPredicted RBP24.66■■□□□ 1.54
LCK-210ENST00000476457 PNISRQ8TF01 805 aaKnown RBP24.65■■□□□ 1.54
LCK-210ENST00000476457 ACSBG1Q96GR2 724 aa24.64■■□□□ 1.54
LCK-210ENST00000476457 STK32BQ9NY57 414 aa24.64■■□□□ 1.54
LCK-210ENST00000476457 NHSQ6T4R5 1651 aa24.63■■□□□ 1.53
LCK-210ENST00000476457 FAM9BQ8IZU0 186 aa24.63■■□□□ 1.53
LCK-210ENST00000476457 MAP3K19Q56UN5 1328 aa24.62■■□□□ 1.53
LCK-210ENST00000476457 CASZ1Q86V15 1759 aa24.62■■□□□ 1.53
LCK-210ENST00000476457 SLC15A2Q16348 729 aa24.61■■□□□ 1.53
LCK-210ENST00000476457 LTV1Q96GA3 475 aaPredicted RBP24.61■■□□□ 1.53
LCK-210ENST00000476457 PDGFDQ9GZP0 370 aaPredicted RBP24.61■■□□□ 1.53
LCK-210ENST00000476457 HOXC9P31274 260 aa24.6■■□□□ 1.53
LCK-210ENST00000476457 AMPHP49418 695 aa24.6■■□□□ 1.53
LCK-210ENST00000476457 FAM208AQ9UK61 1670 aaKnown RBP24.59■■□□□ 1.53
LCK-210ENST00000476457 TNNT2P45379 298 aaPredicted RBP24.59■■□□□ 1.53
LCK-210ENST00000476457 FBLN1P23142 703 aa24.58■■□□□ 1.53
LCK-210ENST00000476457 ZBTB7AO95365 584 aa24.56■■□□□ 1.52
LCK-210ENST00000476457 DDX54Q8TDD1 881 aaKnown RBP24.56■■□□□ 1.52
LCK-210ENST00000476457 KAT6BQ8WYB5 2073 aa24.56■■□□□ 1.52
LCK-210ENST00000476457 RTL1A6NKG5 1358 aa24.55■■□□□ 1.52
LCK-210ENST00000476457 BTAF1O14981 1849 aa24.54■■□□□ 1.52
LCK-210ENST00000476457 PTGER2P43116 358 aa24.53■■□□□ 1.52
LCK-210ENST00000476457 MTHFSP49914 203 aa24.53■■□□□ 1.52
LCK-210ENST00000476457 DCAF8L1A6NGE4 600 aa24.52■■□□□ 1.52
LCK-210ENST00000476457 RRS1Q15050 365 aaKnown RBP24.52■■□□□ 1.52
LCK-210ENST00000476457 ATF5Q9Y2D1 282 aaPredicted RBP24.52■■□□□ 1.52
LCK-210ENST00000476457 MTFR1LQ9H019 292 aa24.51■■□□□ 1.51
LCK-210ENST00000476457 INSRP06213 1382 aa24.51■■□□□ 1.51
LCK-210ENST00000476457 MAP2P11137 1827 aaKnown RBP24.5■■□□□ 1.51
LCK-210ENST00000476457 CENPBP07199 599 aaPredicted RBP24.5■■□□□ 1.51
LCK-210ENST00000476457 ZCRB1Q8TBF4 217 aaKnown RBP24.5■■□□□ 1.51
LCK-210ENST00000476457 PAPPAQ13219 1627 aa24.5■■□□□ 1.51
LCK-210ENST00000476457 LRRC4BQ9NT99 713 aa24.49■■□□□ 1.51
LCK-210ENST00000476457 SMG6Q86US8 1419 aaKnown RBP24.49■■□□□ 1.51
LCK-210ENST00000476457 COL3A1P02461 1466 aaPredicted RBP24.48■■□□□ 1.51
LCK-210ENST00000476457 HNRNPUQ00839 825 aaKnown RBP eCLIP24.48■■□□□ 1.51
LCK-210ENST00000476457 SLC27A3Q5K4L6 730 aa24.48■■□□□ 1.51
LCK-210ENST00000476457 NBPF6Q5VWK0 638 aa24.48■■□□□ 1.51
LCK-210ENST00000476457 NBPF4Q96M43 638 aa24.48■■□□□ 1.51
LCK-210ENST00000476457 YY1P25490 414 aa24.47■■□□□ 1.51
LCK-210ENST00000476457 RGPD2P0DJD1 1756 aa24.47■■□□□ 1.51
LCK-210ENST00000476457 MEGF6O75095 1541 aa24.46■■□□□ 1.51
LCK-210ENST00000476457 PRIM1P49642 420 aaKnown RBP24.46■■□□□ 1.51
LCK-210ENST00000476457 CFAP53Q96M91 514 aa24.46■■□□□ 1.51
LCK-210ENST00000476457 POLKQ9UBT6 870 aa24.46■■□□□ 1.51
LCK-210ENST00000476457 KIF24Q5T7B8 1368 aa24.45■■□□□ 1.5
LCK-210ENST00000476457 ZNF827Q17R98 1081 aa24.45■■□□□ 1.5
LCK-210ENST00000476457 SYTL4Q96C24 671 aaPredicted RBP24.45■■□□□ 1.5
LCK-210ENST00000476457 SGIP1Q9BQI5 828 aa24.45■■□□□ 1.5
LCK-210ENST00000476457 WDR43Q15061 677 aaKnown RBP eCLIP24.44■■□□□ 1.5
LCK-210ENST00000476457 HSP90AB2PQ58FF8 381 aa24.43■■□□□ 1.5
LCK-210ENST00000476457 RAPGEF4Q8WZA2 1011 aa24.43■■□□□ 1.5
LCK-210ENST00000476457 AKT1S1Q96B36 256 aa24.43■■□□□ 1.5
LCK-210ENST00000476457 ADAMTS8Q9UP79 889 aa24.43■■□□□ 1.5
LCK-210ENST00000476457 FLT4P35916 1363 aa24.42■■□□□ 1.5
LCK-210ENST00000476457 USHBP1Q8N6Y0 703 aa24.42■■□□□ 1.5
LCK-210ENST00000476457 SHANK3Q9BYB0 1731 aa24.41■■□□□ 1.5
LCK-210ENST00000476457 SYT17Q9BSW7 474 aa24.41■■□□□ 1.5
LCK-210ENST00000476457 UTRNP46939 3433 aa24.41■■□□□ 1.5
LCK-210ENST00000476457 TATP17735 454 aaPredicted RBP24.4■■□□□ 1.5
LCK-210ENST00000476457 FHDC1Q9C0D6 1143 aaPredicted RBP24.4■■□□□ 1.5
LCK-210ENST00000476457 DOT1LQ8TEK3 1739 aa24.39■■□□□ 1.5
LCK-210ENST00000476457 EMILIN1Q9Y6C2 1016 aa24.39■■□□□ 1.49
LCK-210ENST00000476457 SLC16A10Q8TF71 515 aa24.38■■□□□ 1.49
LCK-210ENST00000476457 ARXQ96QS3 562 aa24.38■■□□□ 1.49
LCK-210ENST00000476457 ZBED9Q6R2W3 1325 aa24.36■■□□□ 1.49
LCK-210ENST00000476457 LY75O60449 1722 aa24.35■■□□□ 1.49
LCK-210ENST00000476457 QSER1Q2KHR3 1735 aa24.35■■□□□ 1.49
LCK-210ENST00000476457 PNPLA7Q6ZV29 1317 aa24.35■■□□□ 1.49
LCK-210ENST00000476457 PCDH11XQ9BZA7 1347 aa24.35■■□□□ 1.49
LCK-210ENST00000476457 PCDH11YQ9BZA8 1340 aa24.35■■□□□ 1.49
LCK-210ENST00000476457 KCNQ4P56696 695 aa24.34■■□□□ 1.49
LCK-210ENST00000476457 TFCP2L1Q9NZI6 479 aa24.34■■□□□ 1.49
LCK-210ENST00000476457 CCNL1Q9UK58 526 aaPredicted RBP24.34■■□□□ 1.49
LCK-210ENST00000476457 MAP3K5Q99683 1374 aa24.33■■□□□ 1.49
LCK-210ENST00000476457 PPM1GO15355 546 aaPredicted RBP24.33■■□□□ 1.49
LCK-210ENST00000476457 DIAPH1O60610 1272 aaKnown RBP24.33■■□□□ 1.49
LCK-210ENST00000476457 NUDCQ9Y266 331 aa24.31■■□□□ 1.48
LCK-210ENST00000476457 POLD1P28340 1107 aa24.3■■□□□ 1.48
LCK-210ENST00000476457 CYP27B1O15528 508 aa24.29■■□□□ 1.48
LCK-210ENST00000476457 NCAPD2Q15021 1401 aa24.28■■□□□ 1.48
LCK-210ENST00000476457 HMGB2P26583 209 aaKnown RBP24.28■■□□□ 1.48
LCK-210ENST00000476457 U2AF1L5P0DN76 240 aaPredicted RBP24.27■■□□□ 1.48
LCK-210ENST00000476457 IL13P35225 146 aa24.27■■□□□ 1.48
LCK-210ENST00000476457 U2AF1Q01081 240 aaKnown RBP eCLIP24.27■■□□□ 1.48
LCK-210ENST00000476457 CCDC146Q8IYE0 955 aa24.27■■□□□ 1.48
LCK-210ENST00000476457 SENP3-EIF4A1A0A087X0R7 540 aa24.26■■□□□ 1.47
LCK-210ENST00000476457 COL24A1Q17RW2 1714 aa24.26■■□□□ 1.47
LCK-210ENST00000476457 TUBGCP6Q96RT7 1819 aa24.26■■□□□ 1.47
LCK-210ENST00000476457 U2SURPO15042 1029 aaKnown RBP24.25■■□□□ 1.47
LCK-210ENST00000476457 MPRIPQ6WCQ1 1025 aa24.25■■□□□ 1.47
LCK-210ENST00000476457 EYA1Q99502 592 aa24.24■■□□□ 1.47
LCK-210ENST00000476457 SPG7Q9UQ90 795 aa24.24■■□□□ 1.47
LCK-210ENST00000476457 NKX1-1Q15270 411 aaPredicted RBP24.23■■□□□ 1.47
LCK-210ENST00000476457 RUNDC1Q96C34 613 aa24.23■■□□□ 1.47
LCK-210ENST00000476457 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.23■■□□□ 1.47
LCK-210ENST00000476457 PALLDQ8WX93 1383 aa24.23■■□□□ 1.47
LCK-210ENST00000476457 PKD1L3Q7Z443 1732 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms