RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 SOX11P35716 441 aa9.9□□□□□ -0.82
PTCD3-211ENST00000476215 CTSOP43234 321 aaPredicted RBP9.9□□□□□ -0.82
PTCD3-211ENST00000476215 SLC16A10Q8TF71 515 aa9.9□□□□□ -0.82
PTCD3-211ENST00000476215 CCDC85AQ96PX6 553 aaPredicted RBP9.9□□□□□ -0.82
PTCD3-211ENST00000476215 SCTRP47872 440 aa9.89□□□□□ -0.83
PTCD3-211ENST00000476215 VAC14Q08AM6 782 aa9.89□□□□□ -0.83
PTCD3-211ENST00000476215 FOXD4L5Q5VV16 416 aaPredicted RBP9.89□□□□□ -0.83
PTCD3-211ENST00000476215 WWC1Q8IX03 1113 aa9.89□□□□□ -0.83
PTCD3-211ENST00000476215 RNF217Q8TC41 542 aa9.89□□□□□ -0.83
PTCD3-211ENST00000476215 INSM2Q96T92 566 aaPredicted RBP9.89□□□□□ -0.83
PTCD3-211ENST00000476215 OSBPL3Q9H4L5 887 aa9.89□□□□□ -0.83
PTCD3-211ENST00000476215 PCDHB11Q9Y5F2 797 aa9.89□□□□□ -0.83
PTCD3-211ENST00000476215 ATP5J2-PTCD1G3V325 749 aa9.87□□□□□ -0.83
PTCD3-211ENST00000476215 GPC1P35052 558 aa9.87□□□□□ -0.83
PTCD3-211ENST00000476215 RNF144AP50876 292 aaPredicted RBP9.87□□□□□ -0.83
PTCD3-211ENST00000476215 CYP2U1Q7Z449 544 aa9.87□□□□□ -0.83
PTCD3-211ENST00000476215 FNBP4Q8N3X1 1017 aaPredicted RBP9.87□□□□□ -0.83
PTCD3-211ENST00000476215 PPFIA3O75145 1194 aa9.86□□□□□ -0.83
PTCD3-211ENST00000476215 IRF7Q92985 503 aa9.86□□□□□ -0.83
PTCD3-211ENST00000476215 ZNF395Q9H8N7 513 aaPredicted RBP9.86□□□□□ -0.83
PTCD3-211ENST00000476215 PTSQ03393 145 aa9.85□□□□□ -0.83
PTCD3-211ENST00000476215 ERBB4Q15303 1308 aa9.84□□□□□ -0.83
PTCD3-211ENST00000476215 SLC35F4A4IF30 521 aa9.84□□□□□ -0.83
PTCD3-211ENST00000476215 POLMQ9NP87 494 aaPredicted RBP9.84□□□□□ -0.83
PTCD3-211ENST00000476215 CLN3Q13286 438 aa9.83□□□□□ -0.84
PTCD3-211ENST00000476215 CDCA7Q9BWT1 371 aaPredicted RBP9.83□□□□□ -0.84
PTCD3-211ENST00000476215 ALG2Q9H553 416 aa9.83□□□□□ -0.84
PTCD3-211ENST00000476215 A0A1W2PRU2 124 aa9.82□□□□□ -0.84
PTCD3-211ENST00000476215 FIGNL2A6NMB9 653 aa9.82□□□□□ -0.84
PTCD3-211ENST00000476215 VEGFBP49765 207 aa9.82□□□□□ -0.84
PTCD3-211ENST00000476215 SLFNL1Q499Z3 407 aa9.82□□□□□ -0.84
PTCD3-211ENST00000476215 RNF135Q8IUD6 432 aa9.82□□□□□ -0.84
PTCD3-211ENST00000476215 NANOS1Q8WY41 292 aaKnown RBP9.82□□□□□ -0.84
PTCD3-211ENST00000476215 ZNF777Q9ULD5 760 aaPredicted RBP9.82□□□□□ -0.84
PTCD3-211ENST00000476215 SENP3-EIF4A1A0A087X0R7 540 aa9.81□□□□□ -0.84
PTCD3-211ENST00000476215 ARID3CA6NKF2 412 aa9.81□□□□□ -0.84
PTCD3-211ENST00000476215 GNRH1P01148 92 aa9.81□□□□□ -0.84
PTCD3-211ENST00000476215 MAP7D1Q3KQU3 841 aa9.81□□□□□ -0.84
PTCD3-211ENST00000476215 TSGA10IPQ3SY00 556 aa9.81□□□□□ -0.84
PTCD3-211ENST00000476215 DOLKQ9UPQ8 538 aa9.81□□□□□ -0.84
PTCD3-211ENST00000476215 HRH3Q9Y5N1 445 aa9.81□□□□□ -0.84
PTCD3-211ENST00000476215 GMPRP36959 345 aa9.8□□□□□ -0.84
PTCD3-211ENST00000476215 SEMA3FQ13275 785 aa9.8□□□□□ -0.84
PTCD3-211ENST00000476215 LYSMD3Q7Z3D4 306 aa9.8□□□□□ -0.84
PTCD3-211ENST00000476215 CCDC155Q8N6L0 562 aa9.8□□□□□ -0.84
PTCD3-211ENST00000476215 MYCP01106 439 aaPredicted RBP9.79□□□□□ -0.84
PTCD3-211ENST00000476215 NFATC2IPQ8NCF5 419 aa9.79□□□□□ -0.84
PTCD3-211ENST00000476215 GRIP2Q9C0E4 1043 aa9.79□□□□□ -0.84
PTCD3-211ENST00000476215 POM121CA8CG34 1229 aa9.78□□□□□ -0.84
PTCD3-211ENST00000476215 SPATA31C2B4DYI2 1134 aa9.78□□□□□ -0.84
PTCD3-211ENST00000476215 USP4Q13107 963 aa9.78□□□□□ -0.84
PTCD3-211ENST00000476215 LORP23490 312 aaPredicted RBP9.77□□□□□ -0.85
PTCD3-211ENST00000476215 INSM1Q01101 510 aaPredicted RBP9.77□□□□□ -0.85
PTCD3-211ENST00000476215 WDR44Q5JSH3 913 aa9.77□□□□□ -0.85
PTCD3-211ENST00000476215 PLPP7Q8NBV4 271 aa9.77□□□□□ -0.85
PTCD3-211ENST00000476215 SIRT1Q96EB6 747 aa9.77□□□□□ -0.85
PTCD3-211ENST00000476215 XAGE2Q96GT9 111 aa9.77□□□□□ -0.85
PTCD3-211ENST00000476215 ESYT1Q9BSJ8 1104 aa9.77□□□□□ -0.85
PTCD3-211ENST00000476215 ARHGEF10LQ9HCE6 1279 aa9.77□□□□□ -0.85
PTCD3-211ENST00000476215 IL2RAP01589 272 aa9.76□□□□□ -0.85
PTCD3-211ENST00000476215 ADAMTS19Q8TE59 1207 aa9.76□□□□□ -0.85
PTCD3-211ENST00000476215 MEN1O00255 615 aa9.75□□□□□ -0.85
PTCD3-211ENST00000476215 ITGA6P23229 1130 aa9.75□□□□□ -0.85
PTCD3-211ENST00000476215 NLRP3Q96P20 1036 aa9.75□□□□□ -0.85
PTCD3-211ENST00000476215 FHDC1Q9C0D6 1143 aaPredicted RBP9.75□□□□□ -0.85
PTCD3-211ENST00000476215 C1orf115Q9H7X2 142 aa9.75□□□□□ -0.85
PTCD3-211ENST00000476215 WASLO00401 505 aaPredicted RBP9.74□□□□□ -0.85
PTCD3-211ENST00000476215 LZTS3O60299 673 aaPredicted RBP9.74□□□□□ -0.85
PTCD3-211ENST00000476215 ESF1Q9H501 851 aaKnown RBP9.74□□□□□ -0.85
PTCD3-211ENST00000476215 PIK3CDO00329 1044 aa9.73□□□□□ -0.85
PTCD3-211ENST00000476215 GLMNQ92990 594 aa9.73□□□□□ -0.85
PTCD3-211ENST00000476215 CNKSR1Q969H4 720 aa9.73□□□□□ -0.85
PTCD3-211ENST00000476215 CALR3Q96L12 384 aaKnown RBP9.73□□□□□ -0.85
PTCD3-211ENST00000476215 ESCO1Q5FWF5 840 aa9.72□□□□□ -0.85
PTCD3-211ENST00000476215 HDGFL1Q5TGJ6 251 aa9.72□□□□□ -0.85
PTCD3-211ENST00000476215 SCNN1DP51172 638 aa9.71□□□□□ -0.86
PTCD3-211ENST00000476215 CENPCQ03188 943 aa9.71□□□□□ -0.86
PTCD3-211ENST00000476215 OXLD1Q5BKU9 147 aa9.71□□□□□ -0.86
PTCD3-211ENST00000476215 NBPF10Q6P3W6 841 aaKnown RBP9.71□□□□□ -0.86
PTCD3-211ENST00000476215 PRICKLE2Q7Z3G6 844 aa9.71□□□□□ -0.86
PTCD3-211ENST00000476215 NBPF15Q8N660 670 aa9.71□□□□□ -0.86
PTCD3-211ENST00000476215 GPR161Q8N6U8 529 aaKnown RBP9.71□□□□□ -0.86
PTCD3-211ENST00000476215 GMCL1Q96IK5 515 aa9.71□□□□□ -0.86
PTCD3-211ENST00000476215 ETNK1Q9HBU6 452 aa9.71□□□□□ -0.86
PTCD3-211ENST00000476215 RAB6BQ9NRW1 208 aa9.71□□□□□ -0.86
PTCD3-211ENST00000476215 DYRK1BQ9Y463 629 aa9.71□□□□□ -0.86
PTCD3-211ENST00000476215 STK17AQ9UEE5 414 aa9.7□□□□□ -0.86
PTCD3-211ENST00000476215 SLC27A3Q5K4L6 730 aa9.69□□□□□ -0.86
PTCD3-211ENST00000476215 ARID3AQ99856 593 aa9.69□□□□□ -0.86
PTCD3-211ENST00000476215 RHOQP17081 205 aa9.68□□□□□ -0.86
PTCD3-211ENST00000476215 KRT76Q01546 638 aa9.68□□□□□ -0.86
PTCD3-211ENST00000476215 POU4F2Q12837 409 aa9.68□□□□□ -0.86
PTCD3-211ENST00000476215 PLEKHM2Q8IWE5 1019 aa9.68□□□□□ -0.86
PTCD3-211ENST00000476215 CCDC82Q8N4S0 544 aa9.68□□□□□ -0.86
PTCD3-211ENST00000476215 CCDC97Q96F63 343 aaPredicted RBP9.68□□□□□ -0.86
PTCD3-211ENST00000476215 UCN2Q96RP3 112 aa9.68□□□□□ -0.86
PTCD3-211ENST00000476215 CUEDC1Q9NWM3 386 aaPredicted RBP9.68□□□□□ -0.86
PTCD3-211ENST00000476215 PCDHGA11Q9Y5H2 935 aa9.68□□□□□ -0.86
PTCD3-211ENST00000476215 INHAP05111 366 aa9.67□□□□□ -0.86
PTCD3-211ENST00000476215 SKIP12755 728 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms