RNA–Protein interactions for RNA: ENST00000476135.5

HDAC9-223, Transcript of histone deacetylase 9, human

TSL 5

Gene HDAC9, Length 1,115 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC9-223	ENST00000476135	CHRNA2	Q15822	529 aa		10.93	□□□□□ -0.66
HDAC9-223	ENST00000476135	ARX	Q96QS3	562 aa		10.93	□□□□□ -0.66
HDAC9-223	ENST00000476135	OVOS2	A0A0G2JMS6	1433 aa		10.92	□□□□□ -0.66
HDAC9-223	ENST00000476135	OVOS2	A0A0J9YW53	1432 aa		10.92	□□□□□ -0.66
HDAC9-223	ENST00000476135	OVOS2	Q6IE36	1432 aa		10.92	□□□□□ -0.66
HDAC9-223	ENST00000476135	MARVELD3	Q96A59	401 aa		10.92	□□□□□ -0.66
HDAC9-223	ENST00000476135	STK32B	Q9NY57	414 aa		10.92	□□□□□ -0.66
HDAC9-223	ENST00000476135	PHRF1	Q9P1Y6	1649 aa	Known RBP	10.91	□□□□□ -0.66
HDAC9-223	ENST00000476135	ECM2	O94769	699 aa	Predicted RBP	10.91	□□□□□ -0.66
HDAC9-223	ENST00000476135	SLC15A2	Q16348	729 aa		10.91	□□□□□ -0.66
HDAC9-223	ENST00000476135	MS4A4A	Q96JQ5	239 aa		10.91	□□□□□ -0.66
HDAC9-223	ENST00000476135	DHX57	Q6P158	1386 aa	Known RBP	10.9	□□□□□ -0.66
HDAC9-223	ENST00000476135	LARP1	Q6PKG0	1096 aa	Known RBP	10.9	□□□□□ -0.66
HDAC9-223	ENST00000476135	ANKRD30B	Q9BXX2	1392 aa		10.9	□□□□□ -0.67
HDAC9-223	ENST00000476135	TAOK2	Q9UL54	1235 aa		10.89	□□□□□ -0.67
HDAC9-223	ENST00000476135	PIK3C2G	O75747	1445 aa		10.89	□□□□□ -0.67
HDAC9-223	ENST00000476135	ATP7B	P35670	1465 aa		10.88	□□□□□ -0.67
HDAC9-223	ENST00000476135	ZC3H6	P61129	1189 aa	Known RBP	10.88	□□□□□ -0.67
HDAC9-223	ENST00000476135	MICALL2	Q8IY33	904 aa		10.88	□□□□□ -0.67
HDAC9-223	ENST00000476135	EIF3A	Q14152	1382 aa	Known RBP	10.88	□□□□□ -0.67
HDAC9-223	ENST00000476135	LOC105371045	A0A1W2PR82	267 aa		10.87	□□□□□ -0.67
HDAC9-223	ENST00000476135	TXNRD1	Q16881	649 aa		10.87	□□□□□ -0.67
HDAC9-223	ENST00000476135	PRAM1	Q96QH2	718 aa		10.87	□□□□□ -0.67
HDAC9-223	ENST00000476135	LMO7	Q8WWI1	1683 aa		10.87	□□□□□ -0.67
HDAC9-223	ENST00000476135	BCL9	O00512	1426 aa		10.86	□□□□□ -0.67
HDAC9-223	ENST00000476135	PTF1A	Q7RTS3	328 aa		10.86	□□□□□ -0.67
HDAC9-223	ENST00000476135	NGDN	Q8NEJ9	315 aa	Known RBP	10.86	□□□□□ -0.67
HDAC9-223	ENST00000476135	STK24	Q9Y6E0	443 aa		10.86	□□□□□ -0.67
HDAC9-223	ENST00000476135	AATK	Q6ZMQ8	1374 aa		10.86	□□□□□ -0.67
HDAC9-223	ENST00000476135	ATP10D	Q9P241	1426 aa		10.85	□□□□□ -0.67
HDAC9-223	ENST00000476135	LRRC37A3	O60309	1634 aa		10.85	□□□□□ -0.67
HDAC9-223	ENST00000476135	GRIN3B	O60391	1043 aa		10.85	□□□□□ -0.67
HDAC9-223	ENST00000476135	HOXB3	P14651	431 aa	Predicted RBP	10.85	□□□□□ -0.67
HDAC9-223	ENST00000476135	ITGAE	P38570	1179 aa		10.85	□□□□□ -0.67
HDAC9-223	ENST00000476135	SAFB2	Q14151	953 aa	Known RBP eCLIP	10.85	□□□□□ -0.67
HDAC9-223	ENST00000476135	C14orf93	Q9H972	538 aa	Known RBP	10.85	□□□□□ -0.67
HDAC9-223	ENST00000476135	CPD	O75976	1380 aa		10.85	□□□□□ -0.67
HDAC9-223	ENST00000476135	PRR36	Q9H6K5	1346 aa		10.84	□□□□□ -0.67
HDAC9-223	ENST00000476135	TULP4	Q9NRJ4	1543 aa		10.84	□□□□□ -0.67
HDAC9-223	ENST00000476135	RGL2	O15211	777 aa		10.84	□□□□□ -0.67
HDAC9-223	ENST00000476135	DDB1	Q16531	1140 aa		10.84	□□□□□ -0.67
HDAC9-223	ENST00000476135	GPBP1L1	Q9HC44	474 aa	Predicted RBP	10.84	□□□□□ -0.67
HDAC9-223	ENST00000476135	COL24A1	Q17RW2	1714 aa		10.84	□□□□□ -0.67
HDAC9-223	ENST00000476135	SPATA31E1	Q6ZUB1	1445 aa		10.84	□□□□□ -0.67
HDAC9-223	ENST00000476135	STK25	O00506	426 aa		10.83	□□□□□ -0.68
HDAC9-223	ENST00000476135	EMP3	P54852	163 aa		10.83	□□□□□ -0.68
HDAC9-223	ENST00000476135	RGL3	Q3MIN7	710 aa		10.83	□□□□□ -0.68
HDAC9-223	ENST00000476135	TMEM92	Q6UXU6	159 aa		10.83	□□□□□ -0.68
HDAC9-223	ENST00000476135	POGK	Q9P215	609 aa		10.83	□□□□□ -0.68
HDAC9-223	ENST00000476135	CRB1	P82279	1406 aa		10.83	□□□□□ -0.68
HDAC9-223	ENST00000476135	AKAP12	Q02952	1782 aa		10.82	□□□□□ -0.68
HDAC9-223	ENST00000476135	COL5A2	P05997	1499 aa	Predicted RBP	10.82	□□□□□ -0.68
HDAC9-223	ENST00000476135	NLRP6	P59044	892 aa		10.82	□□□□□ -0.68
HDAC9-223	ENST00000476135	FBXO22	Q8NEZ5	403 aa		10.82	□□□□□ -0.68
HDAC9-223	ENST00000476135	ITSN1	Q15811	1721 aa		10.81	□□□□□ -0.68
HDAC9-223	ENST00000476135	PAPPA	Q13219	1627 aa		10.81	□□□□□ -0.68
HDAC9-223	ENST00000476135	APLP1	P51693	650 aa		10.81	□□□□□ -0.68
HDAC9-223	ENST00000476135	MARCH10	Q8NA82	808 aa	Predicted RBP	10.81	□□□□□ -0.68
HDAC9-223	ENST00000476135	SLC16A10	Q8TF71	515 aa		10.81	□□□□□ -0.68
HDAC9-223	ENST00000476135	GOLGB1	Q14789	3259 aa	Known RBP	10.81	□□□□□ -0.68
HDAC9-223	ENST00000476135	TOPAZ1	Q8N9V7	1692 aa		10.8	□□□□□ -0.68
HDAC9-223	ENST00000476135	WNK3	Q9BYP7	1800 aa		10.8	□□□□□ -0.68
HDAC9-223	ENST00000476135	WASL	O00401	505 aa	Predicted RBP	10.8	□□□□□ -0.68
HDAC9-223	ENST00000476135	POLD1	P28340	1107 aa		10.8	□□□□□ -0.68
HDAC9-223	ENST00000476135	PRELP	P51888	382 aa		10.8	□□□□□ -0.68
HDAC9-223	ENST00000476135	NUTM2G	Q5VZR2	741 aa		10.8	□□□□□ -0.68
HDAC9-223	ENST00000476135	DNAJC5G	Q8N7S2	189 aa		10.8	□□□□□ -0.68
HDAC9-223	ENST00000476135	MFRP	Q9BY79	579 aa		10.8	□□□□□ -0.68
HDAC9-223	ENST00000476135	QSER1	Q2KHR3	1735 aa		10.79	□□□□□ -0.68
HDAC9-223	ENST00000476135	SLC34A2	O95436	690 aa		10.79	□□□□□ -0.68
HDAC9-223	ENST00000476135	YBX3	P16989	372 aa	Known RBP eCLIP	10.79	□□□□□ -0.68
HDAC9-223	ENST00000476135	CFAP70	Q5T0N1	1121 aa		10.79	□□□□□ -0.68
HDAC9-223	ENST00000476135	NLGN2	Q8NFZ4	835 aa		10.79	□□□□□ -0.68
HDAC9-223	ENST00000476135	HIRIP3	Q9BW71	556 aa	Predicted RBP	10.79	□□□□□ -0.68
HDAC9-223	ENST00000476135	CDCA7	Q9BWT1	371 aa	Predicted RBP	10.79	□□□□□ -0.68
HDAC9-223	ENST00000476135	ADCY9	O60503	1353 aa		10.78	□□□□□ -0.68
HDAC9-223	ENST00000476135	COL13A1	Q5TAT6	717 aa	Predicted RBP	10.78	□□□□□ -0.68
HDAC9-223	ENST00000476135	USP19	O94966	1318 aa		10.78	□□□□□ -0.68
HDAC9-223	ENST00000476135	MINK1	Q8N4C8	1332 aa	Predicted RBP	10.78	□□□□□ -0.68
HDAC9-223	ENST00000476135	POTEB3	A0JP26	581 aa		10.77	□□□□□ -0.69
HDAC9-223	ENST00000476135	FAM205C	A6NFA0	338 aa		10.77	□□□□□ -0.69
HDAC9-223	ENST00000476135	DOK7	Q18PE1	504 aa		10.77	□□□□□ -0.69
HDAC9-223	ENST00000476135	POTEB	Q6S5H4	581 aa		10.77	□□□□□ -0.69
HDAC9-223	ENST00000476135	ZNF710	Q8N1W2	664 aa		10.77	□□□□□ -0.69
HDAC9-223	ENST00000476135	HS3ST6	Q96QI5	342 aa		10.77	□□□□□ -0.69
HDAC9-223	ENST00000476135	NHS	Q6T4R5	1651 aa		10.76	□□□□□ -0.69
HDAC9-223	ENST00000476135	POLR3A	O14802	1390 aa	Predicted RBP	10.76	□□□□□ -0.69
HDAC9-223	ENST00000476135	GC	P02774	474 aa		10.75	□□□□□ -0.69
HDAC9-223	ENST00000476135	HOXB1	P14653	301 aa	Predicted RBP	10.75	□□□□□ -0.69
HDAC9-223	ENST00000476135	ZNF827	Q17R98	1081 aa		10.75	□□□□□ -0.69
HDAC9-223	ENST00000476135	TOM1L2	Q6ZVM7	507 aa		10.75	□□□□□ -0.69
HDAC9-223	ENST00000476135	TNS4	Q8IZW8	715 aa		10.75	□□□□□ -0.69
HDAC9-223	ENST00000476135	ABTB2	Q8N961	1025 aa		10.75	□□□□□ -0.69
HDAC9-223	ENST00000476135	NUDT16	Q96DE0	195 aa	Known RBP	10.75	□□□□□ -0.69
HDAC9-223	ENST00000476135	KIF3C	O14782	793 aa		10.74	□□□□□ -0.69
HDAC9-223	ENST00000476135	NLRP13	Q86W25	1043 aa		10.74	□□□□□ -0.69
HDAC9-223	ENST00000476135	ZNF526	Q8TF50	670 aa	Predicted RBP	10.74	□□□□□ -0.69
HDAC9-223	ENST00000476135	ADGRB1	O14514	1584 aa		10.73	□□□□□ -0.69
HDAC9-223	ENST00000476135	EXOC5	O00471	708 aa		10.72	□□□□□ -0.69
HDAC9-223	ENST00000476135	JMY	Q8N9B5	988 aa		10.72	□□□□□ -0.69

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