RNA–Protein interactions for RNA: ENST00000476126.1

SP140-209, Transcript of SP140 nuclear body protein, humanhuman

TSL 3

Gene SP140, Length 463 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-209ENST00000476126 NBPF14Q5TI25 921 aa9.55□□□□□ -0.88
SP140-209ENST00000476126 ACSBG1Q96GR2 724 aa9.55□□□□□ -0.88
SP140-209ENST00000476126 CARD14Q9BXL6 1004 aa9.55□□□□□ -0.88
SP140-209ENST00000476126 BCL11BQ9C0K0 894 aaPredicted RBP9.55□□□□□ -0.88
SP140-209ENST00000476126 QSER1Q2KHR3 1735 aa9.55□□□□□ -0.88
SP140-209ENST00000476126 TOGARAM1Q9Y4F4 1720 aa9.54□□□□□ -0.88
SP140-209ENST00000476126 INSRP06213 1382 aa9.54□□□□□ -0.88
SP140-209ENST00000476126 USHBP1Q8N6Y0 703 aa9.54□□□□□ -0.88
SP140-209ENST00000476126 TAF1LQ8IZX4 1826 aa9.54□□□□□ -0.88
SP140-209ENST00000476126 C5P01031 1676 aa9.53□□□□□ -0.88
SP140-209ENST00000476126 DDX54Q8TDD1 881 aaKnown RBP9.53□□□□□ -0.88
SP140-209ENST00000476126 RAPGEF4Q8WZA2 1011 aa9.53□□□□□ -0.88
SP140-209ENST00000476126 EMILIN1Q9Y6C2 1016 aa9.53□□□□□ -0.88
SP140-209ENST00000476126 PAPPAQ13219 1627 aa9.53□□□□□ -0.88
SP140-209ENST00000476126 NSD2O96028 1365 aa9.52□□□□□ -0.88
SP140-209ENST00000476126 PLSCR1O15162 318 aa9.52□□□□□ -0.89
SP140-209ENST00000476126 TATP17735 454 aaPredicted RBP9.52□□□□□ -0.89
SP140-209ENST00000476126 TNNT2P45379 298 aaPredicted RBP9.52□□□□□ -0.89
SP140-209ENST00000476126 HSP90AB2PQ58FF8 381 aa9.52□□□□□ -0.89
SP140-209ENST00000476126 PTF1AQ7RTS3 328 aa9.52□□□□□ -0.89
SP140-209ENST00000476126 PANK3Q9H999 370 aa9.52□□□□□ -0.89
SP140-209ENST00000476126 NPM3O75607 178 aaKnown RBP9.51□□□□□ -0.89
SP140-209ENST00000476126 NBPF6Q5VWK0 638 aa9.51□□□□□ -0.89
SP140-209ENST00000476126 SYTL4Q96C24 671 aaPredicted RBP9.51□□□□□ -0.89
SP140-209ENST00000476126 NBPF4Q96M43 638 aa9.51□□□□□ -0.89
SP140-209ENST00000476126 KCNQ2O43526 872 aa9.5□□□□□ -0.89
SP140-209ENST00000476126 ZCRB1Q8TBF4 217 aaKnown RBP9.5□□□□□ -0.89
SP140-209ENST00000476126 KNSTRNQ9Y448 316 aa9.5□□□□□ -0.89
SP140-209ENST00000476126 TXNRD1Q16881 649 aa9.49□□□□□ -0.89
SP140-209ENST00000476126 STK32BQ9NY57 414 aa9.49□□□□□ -0.89
SP140-209ENST00000476126 KIF7Q2M1P5 1343 aa9.49□□□□□ -0.89
SP140-209ENST00000476126 PCDH11XQ9BZA7 1347 aa9.49□□□□□ -0.89
SP140-209ENST00000476126 PCDH11YQ9BZA8 1340 aa9.49□□□□□ -0.89
SP140-209ENST00000476126 MORC1Q86VD1 984 aa9.48□□□□□ -0.89
SP140-209ENST00000476126 WASHC2AQ641Q2 1341 aa9.48□□□□□ -0.89
SP140-209ENST00000476126 SCN11AQ9UI33 1791 aa9.47□□□□□ -0.89
SP140-209ENST00000476126 ANO8Q9HCE9 1232 aaPredicted RBP9.47□□□□□ -0.89
SP140-209ENST00000476126 POLKQ9UBT6 870 aa9.47□□□□□ -0.89
SP140-209ENST00000476126 PPP1R1BQ9UD71 204 aaPredicted RBP9.47□□□□□ -0.89
SP140-209ENST00000476126 NCAPD2Q15021 1401 aa9.47□□□□□ -0.89
SP140-209ENST00000476126 SRCAPQ6ZRS2 3230 aa9.46□□□□□ -0.89
SP140-209ENST00000476126 UBR3Q6ZT12 1888 aa9.45□□□□□ -0.9
SP140-209ENST00000476126 PRIM1P49642 420 aaKnown RBP9.45□□□□□ -0.9
SP140-209ENST00000476126 EIF4A2Q14240 407 aaKnown RBP9.45□□□□□ -0.9
SP140-209ENST00000476126 PROM2Q8N271 834 aa9.45□□□□□ -0.9
SP140-209ENST00000476126 SPON1Q9HCB6 807 aa9.45□□□□□ -0.9
SP140-209ENST00000476126 SPG7Q9UQ90 795 aa9.45□□□□□ -0.9
SP140-209ENST00000476126 C4BP0C0L5 1744 aa9.45□□□□□ -0.9
SP140-209ENST00000476126 MAPK8IP2Q13387 824 aaPredicted RBP9.44□□□□□ -0.9
SP140-209ENST00000476126 CNGB1Q14028 1251 aaPredicted RBP9.44□□□□□ -0.9
SP140-209ENST00000476126 SLC15A2Q16348 729 aa9.44□□□□□ -0.9
SP140-209ENST00000476126 CNKSR2Q8WXI2 1034 aa9.44□□□□□ -0.9
SP140-209ENST00000476126 EYA1Q99502 592 aa9.44□□□□□ -0.9
SP140-209ENST00000476126 COL24A1Q17RW2 1714 aa9.44□□□□□ -0.9
SP140-209ENST00000476126 COL5A3P25940 1745 aaPredicted RBP9.43□□□□□ -0.9
SP140-209ENST00000476126 CC2D1BQ5T0F9 858 aaKnown RBP9.43□□□□□ -0.9
SP140-209ENST00000476126 IGSF1Q8N6C5 1336 aa9.42□□□□□ -0.9
SP140-209ENST00000476126 CYP27B1O15528 508 aa9.42□□□□□ -0.9
SP140-209ENST00000476126 ZBTB7AO95365 584 aa9.42□□□□□ -0.9
SP140-209ENST00000476126 SLC27A3Q5K4L6 730 aa9.42□□□□□ -0.9
SP140-209ENST00000476126 MPRIPQ6WCQ1 1025 aa9.42□□□□□ -0.9
SP140-209ENST00000476126 CCNL1Q9UK58 526 aaPredicted RBP9.42□□□□□ -0.9
SP140-209ENST00000476126 CHD4Q14839 1912 aa9.42□□□□□ -0.9
SP140-209ENST00000476126 PALLDQ8WX93 1383 aa9.41□□□□□ -0.9
SP140-209ENST00000476126 PLEKHG2Q9H7P9 1386 aa9.41□□□□□ -0.9
SP140-209ENST00000476126 KCNQ4P56696 695 aa9.41□□□□□ -0.9
SP140-209ENST00000476126 ZNF827Q17R98 1081 aa9.41□□□□□ -0.9
SP140-209ENST00000476126 AMER1Q5JTC6 1135 aaPredicted RBP9.41□□□□□ -0.9
SP140-209ENST00000476126 IFNL2Q8IZJ0 200 aa9.41□□□□□ -0.9
SP140-209ENST00000476126 PDGFDQ9GZP0 370 aaPredicted RBP9.41□□□□□ -0.9
SP140-209ENST00000476126 LRRC4BQ9NT99 713 aa9.41□□□□□ -0.9
SP140-209ENST00000476126 ZNF831Q5JPB2 1677 aa9.4□□□□□ -0.9
SP140-209ENST00000476126 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.4□□□□□ -0.9
SP140-209ENST00000476126 TMOD3Q9NYL9 352 aa9.4□□□□□ -0.9
SP140-209ENST00000476126 ATF5Q9Y2D1 282 aaPredicted RBP9.4□□□□□ -0.9
SP140-209ENST00000476126 PHKG2P15735 406 aa9.39□□□□□ -0.91
SP140-209ENST00000476126 PLEKHO1Q53GL0 409 aaPredicted RBP9.39□□□□□ -0.91
SP140-209ENST00000476126 ZNF530Q6P9A1 599 aaPredicted RBP9.39□□□□□ -0.91
SP140-209ENST00000476126 SMARCC1Q92922 1105 aaPredicted RBP9.39□□□□□ -0.91
SP140-209ENST00000476126 MTFR1LQ9H019 292 aa9.39□□□□□ -0.91
SP140-209ENST00000476126 TFCP2L1Q9NZI6 479 aa9.39□□□□□ -0.91
SP140-209ENST00000476126 C4AP0C0L4 1744 aa9.39□□□□□ -0.91
SP140-209ENST00000476126 DCAF8L1A6NGE4 600 aa9.38□□□□□ -0.91
SP140-209ENST00000476126 MTHFSP49914 203 aa9.38□□□□□ -0.91
SP140-209ENST00000476126 C1orf141Q5JVX7 400 aa9.38□□□□□ -0.91
SP140-209ENST00000476126 SULT6B1Q6IMI4 303 aa9.38□□□□□ -0.91
SP140-209ENST00000476126 AEBP1Q8IUX7 1158 aa9.38□□□□□ -0.91
SP140-209ENST00000476126 TJP1Q07157 1748 aa9.38□□□□□ -0.91
SP140-209ENST00000476126 DLG5Q8TDM6 1919 aa9.38□□□□□ -0.91
SP140-209ENST00000476126 SIPA1L3O60292 1781 aaPredicted RBP9.37□□□□□ -0.91
SP140-209ENST00000476126 PNPLA7Q6ZV29 1317 aa9.37□□□□□ -0.91
SP140-209ENST00000476126 PER1O15534 1290 aaPredicted RBP9.37□□□□□ -0.91
SP140-209ENST00000476126 HSP90AB1P08238 724 aaKnown RBP9.37□□□□□ -0.91
SP140-209ENST00000476126 HMGB2P26583 209 aaKnown RBP9.37□□□□□ -0.91
SP140-209ENST00000476126 NKX1-1Q15270 411 aaPredicted RBP9.37□□□□□ -0.91
SP140-209ENST00000476126 AMOTQ4VCS5 1084 aa9.37□□□□□ -0.91
SP140-209ENST00000476126 KLHL34Q8N239 644 aa9.37□□□□□ -0.91
SP140-209ENST00000476126 AKT1S1Q96B36 256 aa9.37□□□□□ -0.91
SP140-209ENST00000476126 CICQ96RK0 1608 aaPredicted RBP9.37□□□□□ -0.91
SP140-209ENST00000476126 KDRP35968 1356 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms