RNA–Protein interactions for RNA: ENST00000476016.1

GABRE-207, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 4

Gene GABRE, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-207ENST00000476016 RCAN3Q9UKA8 241 aa10.65□□□□□ -0.7
GABRE-207ENST00000476016 SUPT16HQ9Y5B9 1047 aaKnown RBP10.65□□□□□ -0.7
GABRE-207ENST00000476016 SIPA1L3O60292 1781 aaPredicted RBP10.65□□□□□ -0.71
GABRE-207ENST00000476016 CHRNA2Q15822 529 aa10.64□□□□□ -0.71
GABRE-207ENST00000476016 AMOTQ4VCS5 1084 aa10.64□□□□□ -0.71
GABRE-207ENST00000476016 ERICH6BQ5W0A0 696 aa10.64□□□□□ -0.71
GABRE-207ENST00000476016 CARD10Q9BWT7 1032 aa10.64□□□□□ -0.71
GABRE-207ENST00000476016 MYH16Q9H6N6 1097 aa10.64□□□□□ -0.71
GABRE-207ENST00000476016 PRDM11Q9NQV5 511 aa10.64□□□□□ -0.71
GABRE-207ENST00000476016 IFT57Q9NWB7 429 aa10.64□□□□□ -0.71
GABRE-207ENST00000476016 BABAM1Q9NWV8 329 aa10.64□□□□□ -0.71
GABRE-207ENST00000476016 OVOS2A0A0G2JMS6 1433 aa10.64□□□□□ -0.71
GABRE-207ENST00000476016 CACNA1FO60840 1977 aa10.63□□□□□ -0.71
GABRE-207ENST00000476016 SCN11AQ9UI33 1791 aa10.63□□□□□ -0.71
GABRE-207ENST00000476016 IL17REQ8NFR9 667 aa10.63□□□□□ -0.71
GABRE-207ENST00000476016 LTV1Q96GA3 475 aaPredicted RBP10.63□□□□□ -0.71
GABRE-207ENST00000476016 NRAPQ86VF7 1730 aa10.63□□□□□ -0.71
GABRE-207ENST00000476016 FANCIQ9NVI1 1328 aa10.62□□□□□ -0.71
GABRE-207ENST00000476016 GNAT3A8MTJ3 354 aa10.62□□□□□ -0.71
GABRE-207ENST00000476016 BRPF1P55201 1214 aaPredicted RBP10.62□□□□□ -0.71
GABRE-207ENST00000476016 GNAI1P63096 354 aa10.62□□□□□ -0.71
GABRE-207ENST00000476016 PLEKHO1Q53GL0 409 aaPredicted RBP10.62□□□□□ -0.71
GABRE-207ENST00000476016 ZNF428Q96B54 188 aa10.62□□□□□ -0.71
GABRE-207ENST00000476016 GTF3C3Q9Y5Q9 886 aa10.62□□□□□ -0.71
GABRE-207ENST00000476016 PLCH1Q4KWH8 1693 aa10.62□□□□□ -0.71
GABRE-207ENST00000476016 SLIT2O94813 1529 aa10.62□□□□□ -0.71
GABRE-207ENST00000476016 SHANK3Q9BYB0 1731 aa10.61□□□□□ -0.71
GABRE-207ENST00000476016 PARP4Q9UKK3 1724 aaKnown RBP10.61□□□□□ -0.71
GABRE-207ENST00000476016 USHBP1Q8N6Y0 703 aa10.61□□□□□ -0.71
GABRE-207ENST00000476016 MEGF6O75095 1541 aa10.61□□□□□ -0.71
GABRE-207ENST00000476016 MAP3K5Q99683 1374 aa10.61□□□□□ -0.71
GABRE-207ENST00000476016 JCADQ9P266 1359 aa10.61□□□□□ -0.71
GABRE-207ENST00000476016 AKAP4Q5JQC9 854 aa10.6□□□□□ -0.71
GABRE-207ENST00000476016 THUMPD2Q9BTF0 503 aaKnown RBP10.6□□□□□ -0.71
GABRE-207ENST00000476016 KDM3BQ7LBC6 1761 aa10.6□□□□□ -0.71
GABRE-207ENST00000476016 SPATA31A6Q5VVP1 1343 aa10.59□□□□□ -0.71
GABRE-207ENST00000476016 DISP2A7MBM2 1401 aa10.59□□□□□ -0.71
GABRE-207ENST00000476016 WNK3Q9BYP7 1800 aa10.59□□□□□ -0.71
GABRE-207ENST00000476016 VAMP4O75379 141 aa10.59□□□□□ -0.71
GABRE-207ENST00000476016 PIP4K2BP78356 416 aa10.59□□□□□ -0.71
GABRE-207ENST00000476016 DCTN1Q14203 1278 aa10.59□□□□□ -0.71
GABRE-207ENST00000476016 NKX1-1Q15270 411 aaPredicted RBP10.59□□□□□ -0.71
GABRE-207ENST00000476016 MBIPQ9NS73 344 aa10.59□□□□□ -0.71
GABRE-207ENST00000476016 NLRP2Q9NX02 1062 aa10.59□□□□□ -0.71
GABRE-207ENST00000476016 RARSP54136 660 aaKnown RBP10.58□□□□□ -0.72
GABRE-207ENST00000476016 LARP1Q6PKG0 1096 aaKnown RBP10.58□□□□□ -0.72
GABRE-207ENST00000476016 MCM10Q7L590 875 aa10.58□□□□□ -0.72
GABRE-207ENST00000476016 FNBP4Q8N3X1 1017 aaPredicted RBP10.58□□□□□ -0.72
GABRE-207ENST00000476016 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.58□□□□□ -0.72
GABRE-207ENST00000476016 SOS1Q07889 1333 aaPredicted RBP10.58□□□□□ -0.72
GABRE-207ENST00000476016 MRC1P22897 1456 aa10.57□□□□□ -0.72
GABRE-207ENST00000476016 HEG1Q9ULI3 1381 aa10.57□□□□□ -0.72
GABRE-207ENST00000476016 RRP1P56182 461 aaKnown RBP10.57□□□□□ -0.72
GABRE-207ENST00000476016 EXOSC9Q06265 439 aaKnown RBP10.57□□□□□ -0.72
GABRE-207ENST00000476016 TAF7Q15545 349 aaPredicted RBP10.57□□□□□ -0.72
GABRE-207ENST00000476016 RAPGEF4Q8WZA2 1011 aa10.57□□□□□ -0.72
GABRE-207ENST00000476016 TSR2Q969E8 191 aaKnown RBP10.57□□□□□ -0.72
GABRE-207ENST00000476016 BTG4Q9NY30 223 aa10.57□□□□□ -0.72
GABRE-207ENST00000476016 BCL9LQ86UU0 1499 aa10.56□□□□□ -0.72
GABRE-207ENST00000476016 ZBTB7CA1YPR0 619 aa10.56□□□□□ -0.72
GABRE-207ENST00000476016 CYP27B1O15528 508 aa10.56□□□□□ -0.72
GABRE-207ENST00000476016 RNMTO43148 476 aaKnown RBP10.56□□□□□ -0.72
GABRE-207ENST00000476016 PHKG2P15735 406 aa10.56□□□□□ -0.72
GABRE-207ENST00000476016 TATP17735 454 aaPredicted RBP10.56□□□□□ -0.72
GABRE-207ENST00000476016 ALDH1L2Q3SY69 923 aa10.56□□□□□ -0.72
GABRE-207ENST00000476016 RTF1Q92541 710 aaKnown RBP10.56□□□□□ -0.72
GABRE-207ENST00000476016 LGR6Q9HBX8 967 aa10.56□□□□□ -0.72
GABRE-207ENST00000476016 SPG7Q9UQ90 795 aa10.56□□□□□ -0.72
GABRE-207ENST00000476016 PLEKHG5O94827 1062 aa10.55□□□□□ -0.72
GABRE-207ENST00000476016 IL2RBP14784 551 aa10.55□□□□□ -0.72
GABRE-207ENST00000476016 HAP1P54257 671 aaPredicted RBP10.55□□□□□ -0.72
GABRE-207ENST00000476016 ZNF530Q6P9A1 599 aaPredicted RBP10.55□□□□□ -0.72
GABRE-207ENST00000476016 TOM1L2Q6ZVM7 507 aa10.55□□□□□ -0.72
GABRE-207ENST00000476016 C8orf58Q8NAV2 365 aa10.55□□□□□ -0.72
GABRE-207ENST00000476016 THRAP3Q9Y2W1 955 aaKnown RBP10.55□□□□□ -0.72
GABRE-207ENST00000476016 KDM6AO15550 1401 aaPredicted RBP10.55□□□□□ -0.72
GABRE-207ENST00000476016 BCAR3O75815 825 aa10.54□□□□□ -0.72
GABRE-207ENST00000476016 CSB-PGBD3P0DP91 1061 aa10.54□□□□□ -0.72
GABRE-207ENST00000476016 EVA1CP58658 441 aa10.54□□□□□ -0.72
GABRE-207ENST00000476016 PDE3AQ14432 1141 aa10.54□□□□□ -0.72
GABRE-207ENST00000476016 BARGINQ6ZT62 677 aa10.54□□□□□ -0.72
GABRE-207ENST00000476016 IFNL2Q8IZJ0 200 aa10.54□□□□□ -0.72
GABRE-207ENST00000476016 TSPYL6Q8N831 410 aa10.54□□□□□ -0.72
GABRE-207ENST00000476016 DCAF5Q96JK2 942 aa10.54□□□□□ -0.72
GABRE-207ENST00000476016 CDCA7Q9BWT1 371 aaPredicted RBP10.54□□□□□ -0.72
GABRE-207ENST00000476016 LRP6O75581 1613 aa10.54□□□□□ -0.72
GABRE-207ENST00000476016 SPATA31A1Q5TZJ5 1347 aa10.54□□□□□ -0.72
GABRE-207ENST00000476016 SPATA31A5Q5VU36 1347 aa10.54□□□□□ -0.72
GABRE-207ENST00000476016 SPATA31A7Q8IWB4 1347 aa10.54□□□□□ -0.72
GABRE-207ENST00000476016 HSP90AB1P08238 724 aaKnown RBP10.53□□□□□ -0.72
GABRE-207ENST00000476016 HSPA1LP34931 641 aa10.53□□□□□ -0.72
GABRE-207ENST00000476016 FKBP8Q14318 412 aa10.53□□□□□ -0.72
GABRE-207ENST00000476016 ZCRB1Q8TBF4 217 aaKnown RBP10.53□□□□□ -0.72
GABRE-207ENST00000476016 SSH1Q8WYL5 1049 aa10.53□□□□□ -0.72
GABRE-207ENST00000476016 ARHGAP45Q92619 1136 aa10.53□□□□□ -0.72
GABRE-207ENST00000476016 RNF39Q9H2S5 420 aa10.53□□□□□ -0.72
GABRE-207ENST00000476016 C1orf141Q5JVX7 400 aa10.52□□□□□ -0.73
GABRE-207ENST00000476016 MPRIPQ6WCQ1 1025 aa10.52□□□□□ -0.73
GABRE-207ENST00000476016 UBR2Q8IWV8 1755 aa10.52□□□□□ -0.73
GABRE-207ENST00000476016 ITGB4P16144 1822 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms