RNA–Protein interactions for RNA: ENST00000475868.1

PKDCC-205, Transcript of protein kinase domain containing, cytoplasmic, humanhuman

TSL 2

Gene PKDCC, Length 725 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKDCC-205ENST00000475868 RTL1A6NKG5 1358 aa17.09■□□□□ 0.33
PKDCC-205ENST00000475868 NSD2O96028 1365 aa17.09■□□□□ 0.33
PKDCC-205ENST00000475868 C5P01031 1676 aa17.09■□□□□ 0.33
PKDCC-205ENST00000475868 ITGB4P16144 1822 aa17.08■□□□□ 0.33
PKDCC-205ENST00000475868 FHDC1Q9C0D6 1143 aaPredicted RBP17.08■□□□□ 0.32
PKDCC-205ENST00000475868 SMG6Q86US8 1419 aaKnown RBP17.07■□□□□ 0.32
PKDCC-205ENST00000475868 NSD3Q9BZ95 1437 aa17.07■□□□□ 0.32
PKDCC-205ENST00000475868 FYB1O15117 783 aa17.07■□□□□ 0.32
PKDCC-205ENST00000475868 PKD1L3Q7Z443 1732 aa17.07■□□□□ 0.32
PKDCC-205ENST00000475868 CHD4Q14839 1912 aa17.06■□□□□ 0.32
PKDCC-205ENST00000475868 MAP2P11137 1827 aaKnown RBP17.06■□□□□ 0.32
PKDCC-205ENST00000475868 TAF1LQ8IZX4 1826 aa17.06■□□□□ 0.32
PKDCC-205ENST00000475868 PRIM1P49642 420 aaKnown RBP17.06■□□□□ 0.32
PKDCC-205ENST00000475868 MTFR1LQ9H019 292 aa17.06■□□□□ 0.32
PKDCC-205ENST00000475868 COL24A1Q17RW2 1714 aa17.05■□□□□ 0.32
PKDCC-205ENST00000475868 NBPF6Q5VWK0 638 aa17.05■□□□□ 0.32
PKDCC-205ENST00000475868 KLHL34Q8N239 644 aa17.05■□□□□ 0.32
PKDCC-205ENST00000475868 NBPF4Q96M43 638 aa17.05■□□□□ 0.32
PKDCC-205ENST00000475868 DCAF8L1A6NGE4 600 aa17.04■□□□□ 0.32
PKDCC-205ENST00000475868 ZCRB1Q8TBF4 217 aaKnown RBP17.04■□□□□ 0.32
PKDCC-205ENST00000475868 HSP90AB2PQ58FF8 381 aa17.03■□□□□ 0.32
PKDCC-205ENST00000475868 SGIP1Q9BQI5 828 aa17.03■□□□□ 0.32
PKDCC-205ENST00000475868 POLR3GLQ9BT43 218 aa17.03■□□□□ 0.32
PKDCC-205ENST00000475868 FLT4P35916 1363 aa17.02■□□□□ 0.32
PKDCC-205ENST00000475868 SYT17Q9BSW7 474 aa17.02■□□□□ 0.32
PKDCC-205ENST00000475868 EMILIN1Q9Y6C2 1016 aa17.02■□□□□ 0.32
PKDCC-205ENST00000475868 PNPLA7Q6ZV29 1317 aa17.01■□□□□ 0.31
PKDCC-205ENST00000475868 ZEB1P37275 1124 aaPredicted RBP17.01■□□□□ 0.31
PKDCC-205ENST00000475868 AKT1S1Q96B36 256 aa17.01■□□□□ 0.31
PKDCC-205ENST00000475868 ARXQ96QS3 562 aa17.01■□□□□ 0.31
PKDCC-205ENST00000475868 CARD14Q9BXL6 1004 aa17.01■□□□□ 0.31
PKDCC-205ENST00000475868 INSRP06213 1382 aa17.01■□□□□ 0.31
PKDCC-205ENST00000475868 CCER1Q8TC90 406 aaPredicted RBP17■□□□□ 0.31
PKDCC-205ENST00000475868 RAPGEF4Q8WZA2 1011 aa17■□□□□ 0.31
PKDCC-205ENST00000475868 PPM1GO15355 546 aaPredicted RBP16.99■□□□□ 0.31
PKDCC-205ENST00000475868 TFCP2L1Q9NZI6 479 aa16.99■□□□□ 0.31
PKDCC-205ENST00000475868 CCNL1Q9UK58 526 aaPredicted RBP16.99■□□□□ 0.31
PKDCC-205ENST00000475868 TATP17735 454 aaPredicted RBP16.98■□□□□ 0.31
PKDCC-205ENST00000475868 C4BP0C0L5 1744 aa16.97■□□□□ 0.31
PKDCC-205ENST00000475868 SLC24A1O60721 1099 aa16.97■□□□□ 0.31
PKDCC-205ENST00000475868 SLC27A3Q5K4L6 730 aa16.97■□□□□ 0.31
PKDCC-205ENST00000475868 PCDH11XQ9BZA7 1347 aa16.96■□□□□ 0.31
PKDCC-205ENST00000475868 PCDH11YQ9BZA8 1340 aa16.96■□□□□ 0.31
PKDCC-205ENST00000475868 MSH5O43196 834 aa16.96■□□□□ 0.31
PKDCC-205ENST00000475868 MSL1Q68DK7 614 aa16.96■□□□□ 0.31
PKDCC-205ENST00000475868 PELP1Q8IZL8 1130 aaKnown RBP16.96■□□□□ 0.31
PKDCC-205ENST00000475868 UBR3Q6ZT12 1888 aa16.96■□□□□ 0.31
PKDCC-205ENST00000475868 CDCA8Q53HL2 280 aa16.95■□□□□ 0.3
PKDCC-205ENST00000475868 PALLDQ8WX93 1383 aa16.94■□□□□ 0.3
PKDCC-205ENST00000475868 TNNT2P45379 298 aaPredicted RBP16.94■□□□□ 0.3
PKDCC-205ENST00000475868 CYP27B1O15528 508 aa16.93■□□□□ 0.3
PKDCC-205ENST00000475868 MPRIPQ6WCQ1 1025 aa16.93■□□□□ 0.3
PKDCC-205ENST00000475868 NLGN2Q8NFZ4 835 aa16.93■□□□□ 0.3
PKDCC-205ENST00000475868 CGNL1Q0VF96 1302 aa16.93■□□□□ 0.3
PKDCC-205ENST00000475868 MAP3K5Q99683 1374 aa16.92■□□□□ 0.3
PKDCC-205ENST00000475868 POLD1P28340 1107 aa16.92■□□□□ 0.3
PKDCC-205ENST00000475868 NCAPD2Q15021 1401 aa16.92■□□□□ 0.3
PKDCC-205ENST00000475868 UTRNP46939 3433 aa16.92■□□□□ 0.3
PKDCC-205ENST00000475868 KIF24Q5T7B8 1368 aa16.91■□□□□ 0.3
PKDCC-205ENST00000475868 SMIM5Q71RC9 77 aa16.91■□□□□ 0.3
PKDCC-205ENST00000475868 COL23A1Q86Y22 540 aaPredicted RBP16.91■□□□□ 0.3
PKDCC-205ENST00000475868 GPR162Q16538 588 aa16.9■□□□□ 0.3
PKDCC-205ENST00000475868 ZNF784Q8NCA9 323 aaPredicted RBP16.9■□□□□ 0.3
PKDCC-205ENST00000475868 AMIGO3Q86WK7 504 aa16.88■□□□□ 0.29
PKDCC-205ENST00000475868 SLC16A10Q8TF71 515 aa16.88■□□□□ 0.29
PKDCC-205ENST00000475868 PHF14O94880 888 aa16.87■□□□□ 0.29
PKDCC-205ENST00000475868 EYA1Q99502 592 aa16.87■□□□□ 0.29
PKDCC-205ENST00000475868 HSPA5P11021 654 aaKnown RBP16.86■□□□□ 0.29
PKDCC-205ENST00000475868 PIGBQ92521 554 aa16.85■□□□□ 0.29
PKDCC-205ENST00000475868 POLKQ9UBT6 870 aa16.85■□□□□ 0.29
PKDCC-205ENST00000475868 VIRMAQ69YN4 1812 aaKnown RBP16.84■□□□□ 0.29
PKDCC-205ENST00000475868 EIF4A2Q14240 407 aaKnown RBP16.84■□□□□ 0.29
PKDCC-205ENST00000475868 WWC3Q9ULE0 1092 aa16.84■□□□□ 0.29
PKDCC-205ENST00000475868 WASHC2AQ641Q2 1341 aa16.84■□□□□ 0.29
PKDCC-205ENST00000475868 COL5A3P25940 1745 aaPredicted RBP16.84■□□□□ 0.29
PKDCC-205ENST00000475868 GOLGB1Q14789 3259 aaKnown RBP16.83■□□□□ 0.28
PKDCC-205ENST00000475868 AK7Q96M32 723 aa16.83■□□□□ 0.28
PKDCC-205ENST00000475868 CLSPNQ9HAW4 1339 aa16.83■□□□□ 0.28
PKDCC-205ENST00000475868 SPG7Q9UQ90 795 aa16.83■□□□□ 0.28
PKDCC-205ENST00000475868 C4AP0C0L4 1744 aa16.82■□□□□ 0.28
PKDCC-205ENST00000475868 YBX3P16989 372 aaKnown RBP eCLIP16.82■□□□□ 0.28
PKDCC-205ENST00000475868 LINC00116Q8NCU8 138 aa16.82■□□□□ 0.28
PKDCC-205ENST00000475868 EIF4G2P78344 907 aaKnown RBP eCLIP16.81■□□□□ 0.28
PKDCC-205ENST00000475868 PANK3Q9H999 370 aa16.81■□□□□ 0.28
PKDCC-205ENST00000475868 TMOD3Q9NYL9 352 aa16.81■□□□□ 0.28
PKDCC-205ENST00000475868 ASAP1Q9ULH1 1129 aa16.81■□□□□ 0.28
PKDCC-205ENST00000475868 TIMELESSQ9UNS1 1208 aa16.81■□□□□ 0.28
PKDCC-205ENST00000475868 PHKG2P15735 406 aa16.8■□□□□ 0.28
PKDCC-205ENST00000475868 SMARCC1Q92922 1105 aaPredicted RBP16.8■□□□□ 0.28
PKDCC-205ENST00000475868 LOC102724428A0A0B4J2F2 783 aa16.79■□□□□ 0.28
PKDCC-205ENST00000475868 SIK1P57059 783 aa16.79■□□□□ 0.28
PKDCC-205ENST00000475868 ITPK1Q13572 414 aa16.79■□□□□ 0.28
PKDCC-205ENST00000475868 N4BP2Q86UW6 1770 aaPredicted RBP16.79■□□□□ 0.28
PKDCC-205ENST00000475868 KDM6AO15550 1401 aaPredicted RBP16.79■□□□□ 0.28
PKDCC-205ENST00000475868 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.78■□□□□ 0.28
PKDCC-205ENST00000475868 NKX1-1Q15270 411 aaPredicted RBP16.78■□□□□ 0.28
PKDCC-205ENST00000475868 SCN11AQ9UI33 1791 aa16.77■□□□□ 0.28
PKDCC-205ENST00000475868 IGSF1Q8N6C5 1336 aa16.77■□□□□ 0.28
PKDCC-205ENST00000475868 TJP1Q07157 1748 aa16.77■□□□□ 0.28
PKDCC-205ENST00000475868 KIAA1551Q9HCM1 1747 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms