RNA–Protein interactions for RNA: ENST00000475763.5

LSG1-207, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 3

Gene LSG1, Length 590 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-207ENST00000475763 COG3Q96JB2 828 aa15.02■□□□□ -0
LSG1-207ENST00000475763 OVOS2A0A0J9YW53 1432 aa15.01□□□□□ -0.01
LSG1-207ENST00000475763 OVOS2Q6IE36 1432 aa15.01□□□□□ -0.01
LSG1-207ENST00000475763 AATKQ6ZMQ8 1374 aa15.01□□□□□ -0.01
LSG1-207ENST00000475763 NME9Q86XW9 330 aa15.01□□□□□ -0.01
LSG1-207ENST00000475763 VARS2Q5ST30 1063 aaKnown RBP15□□□□□ -0.01
LSG1-207ENST00000475763 KHSRPQ92945 711 aaKnown RBP eCLIP15□□□□□ -0.01
LSG1-207ENST00000475763 CFAP53Q96M91 514 aa15□□□□□ -0.01
LSG1-207ENST00000475763 PIK3C2AO00443 1686 aa15□□□□□ -0.01
LSG1-207ENST00000475763 MMRN1Q13201 1228 aa14.99□□□□□ -0.01
LSG1-207ENST00000475763 SMG6Q86US8 1419 aaKnown RBP14.99□□□□□ -0.01
LSG1-207ENST00000475763 MAP2P11137 1827 aaKnown RBP14.99□□□□□ -0.01
LSG1-207ENST00000475763 TNNT2P45379 298 aaPredicted RBP14.98□□□□□ -0.01
LSG1-207ENST00000475763 MTHFSP49914 203 aa14.98□□□□□ -0.01
LSG1-207ENST00000475763 ORAI2Q96SN7 254 aa14.98□□□□□ -0.01
LSG1-207ENST00000475763 LTBP4Q8N2S1 1624 aa14.97□□□□□ -0.01
LSG1-207ENST00000475763 PSME1Q06323 249 aa14.97□□□□□ -0.01
LSG1-207ENST00000475763 TRPM3Q9HCF6 1732 aaPredicted RBP14.97□□□□□ -0.01
LSG1-207ENST00000475763 WDR43Q15061 677 aaKnown RBP eCLIP14.96□□□□□ -0.01
LSG1-207ENST00000475763 NKX1-1Q15270 411 aaPredicted RBP14.96□□□□□ -0.01
LSG1-207ENST00000475763 TMC2Q8TDI7 906 aa14.96□□□□□ -0.01
LSG1-207ENST00000475763 SHPRHQ149N8 1683 aa14.96□□□□□ -0.01
LSG1-207ENST00000475763 PNPLA6Q8IY17 1366 aa14.96□□□□□ -0.02
LSG1-207ENST00000475763 MARF1Q9Y4F3 1742 aaKnown RBP14.95□□□□□ -0.02
LSG1-207ENST00000475763 BLMP54132 1417 aaPredicted RBP14.95□□□□□ -0.02
LSG1-207ENST00000475763 HNRNPUQ00839 825 aaKnown RBP eCLIP14.95□□□□□ -0.02
LSG1-207ENST00000475763 CDK12Q9NYV4 1490 aaPredicted RBP14.95□□□□□ -0.02
LSG1-207ENST00000475763 FOXO3O43524 673 aa14.94□□□□□ -0.02
LSG1-207ENST00000475763 POLKQ9UBT6 870 aa14.94□□□□□ -0.02
LSG1-207ENST00000475763 COL3A1P02461 1466 aaPredicted RBP14.94□□□□□ -0.02
LSG1-207ENST00000475763 NPHP3Q7Z494 1330 aa14.93□□□□□ -0.02
LSG1-207ENST00000475763 ABTB2Q8N961 1025 aa14.93□□□□□ -0.02
LSG1-207ENST00000475763 KRT28Q7Z3Y7 464 aa14.92□□□□□ -0.02
LSG1-207ENST00000475763 SLAIN2Q9P270 581 aa14.92□□□□□ -0.02
LSG1-207ENST00000475763 SBNO1A3KN83 1393 aa14.92□□□□□ -0.02
LSG1-207ENST00000475763 ZBED9Q6R2W3 1325 aa14.92□□□□□ -0.02
LSG1-207ENST00000475763 ALS2Q96Q42 1657 aa14.91□□□□□ -0.02
LSG1-207ENST00000475763 KIF24Q5T7B8 1368 aa14.91□□□□□ -0.02
LSG1-207ENST00000475763 ADAMTS8Q9UP79 889 aa14.91□□□□□ -0.02
LSG1-207ENST00000475763 NUDCQ9Y266 331 aa14.91□□□□□ -0.02
LSG1-207ENST00000475763 BRINP3Q76B58 766 aa14.9□□□□□ -0.02
LSG1-207ENST00000475763 PXDNQ92626 1479 aa14.89□□□□□ -0.03
LSG1-207ENST00000475763 SLIT3O75094 1523 aa14.88□□□□□ -0.03
LSG1-207ENST00000475763 DIAPH1O60610 1272 aaKnown RBP14.88□□□□□ -0.03
LSG1-207ENST00000475763 KCNH5Q8NCM2 988 aa14.88□□□□□ -0.03
LSG1-207ENST00000475763 EMILIN1Q9Y6C2 1016 aa14.88□□□□□ -0.03
LSG1-207ENST00000475763 NHSL1Q5SYE7 1610 aa14.88□□□□□ -0.03
LSG1-207ENST00000475763 NGEFQ8N5V2 710 aa14.87□□□□□ -0.03
LSG1-207ENST00000475763 PHRF1Q9P1Y6 1649 aaKnown RBP14.87□□□□□ -0.03
LSG1-207ENST00000475763 USP19O94966 1318 aa14.87□□□□□ -0.03
LSG1-207ENST00000475763 NFAT5O94916 1531 aa14.87□□□□□ -0.03
LSG1-207ENST00000475763 TNS3Q68CZ2 1445 aa14.86□□□□□ -0.03
LSG1-207ENST00000475763 RRS1Q15050 365 aaKnown RBP14.86□□□□□ -0.03
LSG1-207ENST00000475763 ZNF687Q8N1G0 1237 aa14.86□□□□□ -0.03
LSG1-207ENST00000475763 PEAK1Q9H792 1746 aa14.86□□□□□ -0.03
LSG1-207ENST00000475763 RTL1A6NKG5 1358 aa14.85□□□□□ -0.03
LSG1-207ENST00000475763 ARHGEF10O15013 1369 aa14.85□□□□□ -0.03
LSG1-207ENST00000475763 FLT4P35916 1363 aa14.85□□□□□ -0.03
LSG1-207ENST00000475763 IQSEC2Q5JU85 1478 aa14.85□□□□□ -0.03
LSG1-207ENST00000475763 NUDT7P0C024 238 aa14.85□□□□□ -0.03
LSG1-207ENST00000475763 FBLN1P23142 703 aa14.85□□□□□ -0.03
LSG1-207ENST00000475763 PNNQ9H307 717 aaKnown RBP14.85□□□□□ -0.03
LSG1-207ENST00000475763 PCDHGA4Q9Y5G9 962 aa14.85□□□□□ -0.03
LSG1-207ENST00000475763 SOS2Q07890 1332 aaPredicted RBP14.85□□□□□ -0.03
LSG1-207ENST00000475763 MAP3K19Q56UN5 1328 aa14.85□□□□□ -0.03
LSG1-207ENST00000475763 LTN1O94822 1766 aa14.84□□□□□ -0.03
LSG1-207ENST00000475763 PPM1GO15355 546 aaPredicted RBP14.84□□□□□ -0.03
LSG1-207ENST00000475763 SLC34A2O95436 690 aa14.84□□□□□ -0.03
LSG1-207ENST00000475763 XPCQ01831 940 aaPredicted RBP14.84□□□□□ -0.03
LSG1-207ENST00000475763 MED1Q15648 1581 aaPredicted RBP14.84□□□□□ -0.03
LSG1-207ENST00000475763 SPATA31A3Q5VYP0 1347 aa14.84□□□□□ -0.03
LSG1-207ENST00000475763 U2AF1L5P0DN76 240 aaPredicted RBP14.83□□□□□ -0.04
LSG1-207ENST00000475763 IL13P35225 146 aa14.83□□□□□ -0.04
LSG1-207ENST00000475763 U2AF1Q01081 240 aaKnown RBP eCLIP14.83□□□□□ -0.04
LSG1-207ENST00000475763 NUTM2GQ5VZR2 741 aa14.83□□□□□ -0.04
LSG1-207ENST00000475763 RUNDC1Q96C34 613 aa14.82□□□□□ -0.04
LSG1-207ENST00000475763 AHDC1Q5TGY3 1603 aaPredicted RBP14.81□□□□□ -0.04
LSG1-207ENST00000475763 CRYBG1Q9Y4K1 1723 aa14.81□□□□□ -0.04
LSG1-207ENST00000475763 U2SURPO15042 1029 aaKnown RBP14.81□□□□□ -0.04
LSG1-207ENST00000475763 FCHSD2O94868 740 aa14.81□□□□□ -0.04
LSG1-207ENST00000475763 GCP02774 474 aa14.81□□□□□ -0.04
LSG1-207ENST00000475763 AMPHP49418 695 aa14.81□□□□□ -0.04
LSG1-207ENST00000475763 ROBO1Q9Y6N7 1651 aa14.81□□□□□ -0.04
LSG1-207ENST00000475763 PDE3BQ13370 1112 aa14.8□□□□□ -0.04
LSG1-207ENST00000475763 LMOD2Q6P5Q4 547 aa14.8□□□□□ -0.04
LSG1-207ENST00000475763 DDX17Q92841 729 aaKnown RBP14.8□□□□□ -0.04
LSG1-207ENST00000475763 GPHNQ9NQX3 736 aaPredicted RBP14.8□□□□□ -0.04
LSG1-207ENST00000475763 RGPD1P0DJD0 1748 aa14.8□□□□□ -0.04
LSG1-207ENST00000475763 ABCC6O95255 1503 aa14.79□□□□□ -0.04
LSG1-207ENST00000475763 HOXC9P31274 260 aa14.78□□□□□ -0.04
LSG1-207ENST00000475763 FOXK1P85037 733 aa14.78□□□□□ -0.04
LSG1-207ENST00000475763 EIF4A2Q14240 407 aaKnown RBP14.78□□□□□ -0.04
LSG1-207ENST00000475763 HSP90AB2PQ58FF8 381 aa14.78□□□□□ -0.04
LSG1-207ENST00000475763 ARHGEF25Q86VW2 580 aa14.78□□□□□ -0.04
LSG1-207ENST00000475763 PLPP6Q8IY26 295 aa14.78□□□□□ -0.04
LSG1-207ENST00000475763 CCDC146Q8IYE0 955 aa14.78□□□□□ -0.04
LSG1-207ENST00000475763 IP6K1Q92551 441 aa14.78□□□□□ -0.04
LSG1-207ENST00000475763 APAF1O14727 1248 aa14.77□□□□□ -0.05
LSG1-207ENST00000475763 TOM1O60784 492 aa14.77□□□□□ -0.05
LSG1-207ENST00000475763 DSG2Q14126 1118 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms