RNA–Protein interactions for RNA: ENST00000475560.5

SRGAP3-205, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 703 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-205ENST00000475560 OXLD1Q5BKU9 147 aa7.51□□□□□ -1.21
SRGAP3-205ENST00000475560 LAPTM4BQ86VI4 370 aa7.51□□□□□ -1.21
SRGAP3-205ENST00000475560 PIK3R5Q8WYR1 880 aa7.51□□□□□ -1.21
SRGAP3-205ENST00000475560 ARHGAP9Q9BRR9 750 aa7.51□□□□□ -1.21
SRGAP3-205ENST00000475560 PCDHGA11Q9Y5H2 935 aa7.51□□□□□ -1.21
SRGAP3-205ENST00000475560 PTCD1O75127 700 aaKnown RBP7.5□□□□□ -1.21
SRGAP3-205ENST00000475560 WEE1P30291 646 aa7.5□□□□□ -1.21
SRGAP3-205ENST00000475560 LDLRAD1Q5T700 205 aa7.5□□□□□ -1.21
SRGAP3-205ENST00000475560 NBPF14Q5TI25 921 aa7.5□□□□□ -1.21
SRGAP3-205ENST00000475560 CAPN12Q6ZSI9 719 aa7.5□□□□□ -1.21
SRGAP3-205ENST00000475560 THAP11Q96EK4 314 aa7.5□□□□□ -1.21
SRGAP3-205ENST00000475560 MKNK1Q9BUB5 465 aa7.5□□□□□ -1.21
SRGAP3-205ENST00000475560 P4HBP07237 508 aaKnown RBP7.49□□□□□ -1.21
SRGAP3-205ENST00000475560 NCLP19338 710 aaKnown RBP7.49□□□□□ -1.21
SRGAP3-205ENST00000475560 DPH6Q7L8W6 267 aa7.49□□□□□ -1.21
SRGAP3-205ENST00000475560 ZBTB33Q86T24 672 aa7.49□□□□□ -1.21
SRGAP3-205ENST00000475560 DZIP3Q86Y13 1208 aaKnown RBP7.49□□□□□ -1.21
SRGAP3-205ENST00000475560 SCUBE3Q8IX30 993 aa7.49□□□□□ -1.21
SRGAP3-205ENST00000475560 RBCK1Q9BYM8 510 aa7.49□□□□□ -1.21
SRGAP3-205ENST00000475560 ARHGAP33O14559 1287 aa7.48□□□□□ -1.21
SRGAP3-205ENST00000475560 GIGYF1O75420 1035 aaPredicted RBP7.48□□□□□ -1.21
SRGAP3-205ENST00000475560 CCNYL3P0C7X3 344 aa7.48□□□□□ -1.21
SRGAP3-205ENST00000475560 NPR3P17342 541 aa7.48□□□□□ -1.21
SRGAP3-205ENST00000475560 RAD51AP2Q09MP3 1159 aa7.48□□□□□ -1.21
SRGAP3-205ENST00000475560 GIMAP6Q6P9H5 292 aa7.48□□□□□ -1.21
SRGAP3-205ENST00000475560 TMC7Q7Z402 723 aa7.48□□□□□ -1.21
SRGAP3-205ENST00000475560 PRR14Q9BWN1 585 aa7.48□□□□□ -1.21
SRGAP3-205ENST00000475560 AXIN2Q9Y2T1 843 aa7.48□□□□□ -1.21
SRGAP3-205ENST00000475560 PSME1Q06323 249 aa7.47□□□□□ -1.21
SRGAP3-205ENST00000475560 USP4Q13107 963 aa7.47□□□□□ -1.21
SRGAP3-205ENST00000475560 FKBP5Q13451 457 aaPredicted RBP7.47□□□□□ -1.21
SRGAP3-205ENST00000475560 COL26A1Q96A83 441 aa7.47□□□□□ -1.21
SRGAP3-205ENST00000475560 ZFRQ96KR1 1074 aaKnown RBP7.47□□□□□ -1.21
SRGAP3-205ENST00000475560 CHMP4AQ9BY43 222 aa7.47□□□□□ -1.21
SRGAP3-205ENST00000475560 M0R2N6 131 aa7.46□□□□□ -1.22
SRGAP3-205ENST00000475560 FAM13AO94988 1023 aa7.46□□□□□ -1.22
SRGAP3-205ENST00000475560 NAA30Q147X3 362 aaPredicted RBP7.46□□□□□ -1.22
SRGAP3-205ENST00000475560 RNF20Q5VTR2 975 aa7.46□□□□□ -1.22
SRGAP3-205ENST00000475560 DMRTA1Q5VZB9 504 aa7.46□□□□□ -1.22
SRGAP3-205ENST00000475560 METTL16Q86W50 562 aaKnown RBP7.46□□□□□ -1.22
SRGAP3-205ENST00000475560 TMEM87AQ8NBN3 555 aa7.46□□□□□ -1.22
SRGAP3-205ENST00000475560 HELQQ8TDG4 1101 aa7.46□□□□□ -1.22
SRGAP3-205ENST00000475560 NUDT12Q9BQG2 462 aa7.46□□□□□ -1.22
SRGAP3-205ENST00000475560 VPS9D1Q9Y2B5 631 aa7.46□□□□□ -1.22
SRGAP3-205ENST00000475560 XPCQ01831 940 aaPredicted RBP7.45□□□□□ -1.22
SRGAP3-205ENST00000475560 PLCB3Q01970 1234 aa7.45□□□□□ -1.22
SRGAP3-205ENST00000475560 SH3BP5LQ7L8J4 393 aa7.45□□□□□ -1.22
SRGAP3-205ENST00000475560 NT5DC4Q86YG4 428 aa7.45□□□□□ -1.22
SRGAP3-205ENST00000475560 ANKRD13AQ8IZ07 590 aa7.45□□□□□ -1.22
SRGAP3-205ENST00000475560 SLC43A3Q8NBI5 491 aa7.45□□□□□ -1.22
SRGAP3-205ENST00000475560 TSEN2Q8NCE0 465 aaKnown RBP7.45□□□□□ -1.22
SRGAP3-205ENST00000475560 PURBQ96QR8 312 aaKnown RBP7.45□□□□□ -1.22
SRGAP3-205ENST00000475560 TANGO6Q9C0B7 1094 aa7.45□□□□□ -1.22
SRGAP3-205ENST00000475560 ANKRD62A6NC57 917 aa7.44□□□□□ -1.22
SRGAP3-205ENST00000475560 BHMG1C9JSJ3 638 aaPredicted RBP7.44□□□□□ -1.22
SRGAP3-205ENST00000475560 TK2O00142 265 aa7.44□□□□□ -1.22
SRGAP3-205ENST00000475560 TREHO43280 583 aa7.44□□□□□ -1.22
SRGAP3-205ENST00000475560 NR1I2O75469 434 aa7.44□□□□□ -1.22
SRGAP3-205ENST00000475560 DXOO77932 396 aaKnown RBP7.44□□□□□ -1.22
SRGAP3-205ENST00000475560 FGD1P98174 961 aa7.44□□□□□ -1.22
SRGAP3-205ENST00000475560 FMR1Q06787 632 aaKnown RBP eCLIP7.44□□□□□ -1.22
SRGAP3-205ENST00000475560 ADGRD1Q6QNK2 874 aa7.44□□□□□ -1.22
SRGAP3-205ENST00000475560 NOP9Q86U38 636 aaKnown RBP7.44□□□□□ -1.22
SRGAP3-205ENST00000475560 MSS51Q4VC12 460 aa7.43□□□□□ -1.22
SRGAP3-205ENST00000475560 GAS2L2Q8NHY3 880 aa7.43□□□□□ -1.22
SRGAP3-205ENST00000475560 CITED4Q96RK1 184 aa7.43□□□□□ -1.22
SRGAP3-205ENST00000475560 NBPF3Q9H094 633 aa7.43□□□□□ -1.22
SRGAP3-205ENST00000475560 PARP2Q9UGN5 583 aa7.43□□□□□ -1.22
SRGAP3-205ENST00000475560 BRPF3Q9ULD4 1205 aa7.43□□□□□ -1.22
SRGAP3-205ENST00000475560 NDUFB5O43674 189 aa7.42□□□□□ -1.22
SRGAP3-205ENST00000475560 LDHBP07195 334 aaKnown RBP7.42□□□□□ -1.22
SRGAP3-205ENST00000475560 ITGAEP38570 1179 aa7.42□□□□□ -1.22
SRGAP3-205ENST00000475560 MMP16P51512 607 aa7.42□□□□□ -1.22
SRGAP3-205ENST00000475560 DSC3Q14574 896 aa7.42□□□□□ -1.22
SRGAP3-205ENST00000475560 TMC4Q7Z404 712 aa7.42□□□□□ -1.22
SRGAP3-205ENST00000475560 FAM160A2Q8N612 972 aaPredicted RBP7.42□□□□□ -1.22
SRGAP3-205ENST00000475560 RNF34Q969K3 372 aa7.42□□□□□ -1.22
SRGAP3-205ENST00000475560 LRCH3Q96II8 777 aa7.42□□□□□ -1.22
SRGAP3-205ENST00000475560 STAC3Q96MF2 364 aa7.42□□□□□ -1.22
SRGAP3-205ENST00000475560 FAM161BQ96MY7 647 aa7.42□□□□□ -1.22
SRGAP3-205ENST00000475560 TINF2Q9BSI4 451 aa7.42□□□□□ -1.22
SRGAP3-205ENST00000475560 HIRIP3Q9BW71 556 aaPredicted RBP7.42□□□□□ -1.22
SRGAP3-205ENST00000475560 LNPKQ9C0E8 428 aa7.42□□□□□ -1.22
SRGAP3-205ENST00000475560 TGIF2Q9GZN2 237 aa7.42□□□□□ -1.22
SRGAP3-205ENST00000475560 METTL5Q9NRN9 209 aaKnown RBP7.42□□□□□ -1.22
SRGAP3-205ENST00000475560 CUEDC1Q9NWM3 386 aaPredicted RBP7.42□□□□□ -1.22
SRGAP3-205ENST00000475560 PRKAG2Q9UGJ0 569 aa7.42□□□□□ -1.22
SRGAP3-205ENST00000475560 SORBS3O60504 671 aa7.41□□□□□ -1.22
SRGAP3-205ENST00000475560 PRPF40AO75400 957 aaKnown RBP7.41□□□□□ -1.22
SRGAP3-205ENST00000475560 IGFBP4P22692 258 aa7.41□□□□□ -1.22
SRGAP3-205ENST00000475560 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.41□□□□□ -1.22
SRGAP3-205ENST00000475560 TMC1Q8TDI8 760 aa7.41□□□□□ -1.22
SRGAP3-205ENST00000475560 DNAJC2Q99543 621 aaKnown RBP7.41□□□□□ -1.22
SRGAP3-205ENST00000475560 DUSP9Q99956 384 aaKnown RBP7.41□□□□□ -1.22
SRGAP3-205ENST00000475560 MRS2Q9HD23 443 aa7.41□□□□□ -1.22
SRGAP3-205ENST00000475560 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.41□□□□□ -1.22
SRGAP3-205ENST00000475560 FOXO3O43524 673 aa7.4□□□□□ -1.22
SRGAP3-205ENST00000475560 HRO43593 1189 aa7.4□□□□□ -1.22
SRGAP3-205ENST00000475560 ATP2B1P20020 1258 aa7.4□□□□□ -1.22
SRGAP3-205ENST00000475560 MPSTP25325 297 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms