RNA–Protein interactions for RNA: ENST00000475411.5

CBWD1-212, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 4,534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-212ENST00000475411 ZNF428Q96B54 188 aa6.9□□□□□ -1.3
CBWD1-212ENST00000475411 NYXQ9GZU5 481 aa6.9□□□□□ -1.3
CBWD1-212ENST00000475411 PHF14O94880 888 aa6.9□□□□□ -1.3
CBWD1-212ENST00000475411 UBTFL1P0CB47 393 aaPredicted RBP6.9□□□□□ -1.3
CBWD1-212ENST00000475411 CNNM1Q9NRU3 951 aa6.9□□□□□ -1.3
CBWD1-212ENST00000475411 CROCC2H7BZ55 1655 aa6.9□□□□□ -1.3
CBWD1-212ENST00000475411 POLR3AO14802 1390 aaPredicted RBP6.9□□□□□ -1.31
CBWD1-212ENST00000475411 SNRPA1P09661 255 aaKnown RBP6.89□□□□□ -1.31
CBWD1-212ENST00000475411 AMER1Q5JTC6 1135 aaPredicted RBP6.89□□□□□ -1.31
CBWD1-212ENST00000475411 CCDC87Q9NVE4 849 aa6.89□□□□□ -1.31
CBWD1-212ENST00000475411 CEP152O94986 1710 aa6.89□□□□□ -1.31
CBWD1-212ENST00000475411 CHMP4CQ96CF2 233 aa6.89□□□□□ -1.31
CBWD1-212ENST00000475411 NOP58Q9Y2X3 529 aaKnown RBP6.89□□□□□ -1.31
CBWD1-212ENST00000475411 PTCH1Q13635 1447 aa6.89□□□□□ -1.31
CBWD1-212ENST00000475411 KIDINS220Q9ULH0 1771 aa6.89□□□□□ -1.31
CBWD1-212ENST00000475411 RNF17Q9BXT8 1623 aaKnown RBP6.89□□□□□ -1.31
CBWD1-212ENST00000475411 HOXC9P31274 260 aa6.89□□□□□ -1.31
CBWD1-212ENST00000475411 TWISTNBQ3B726 338 aaPredicted RBP6.89□□□□□ -1.31
CBWD1-212ENST00000475411 TRAPPC3LQ5T215 181 aa6.89□□□□□ -1.31
CBWD1-212ENST00000475411 LARP1Q6PKG0 1096 aaKnown RBP6.89□□□□□ -1.31
CBWD1-212ENST00000475411 NAP1L2Q9ULW6 460 aaPredicted RBP6.89□□□□□ -1.31
CBWD1-212ENST00000475411 DDX19BQ9UMR2 479 aa6.89□□□□□ -1.31
CBWD1-212ENST00000475411 DCCP43146 1447 aa6.89□□□□□ -1.31
CBWD1-212ENST00000475411 TNS3Q68CZ2 1445 aa6.89□□□□□ -1.31
CBWD1-212ENST00000475411 SBNO2Q9Y2G9 1366 aa6.88□□□□□ -1.31
CBWD1-212ENST00000475411 SPATA31A3Q5VYP0 1347 aa6.88□□□□□ -1.31
CBWD1-212ENST00000475411 APBB1O00213 710 aa6.88□□□□□ -1.31
CBWD1-212ENST00000475411 IFIT2P09913 472 aaKnown RBP6.88□□□□□ -1.31
CBWD1-212ENST00000475411 MYL6BP14649 208 aa6.88□□□□□ -1.31
CBWD1-212ENST00000475411 RTL1A6NKG5 1358 aa6.88□□□□□ -1.31
CBWD1-212ENST00000475411 ROBO2Q9HCK4 1378 aa6.88□□□□□ -1.31
CBWD1-212ENST00000475411 CDC42BPGQ6DT37 1551 aa6.88□□□□□ -1.31
CBWD1-212ENST00000475411 CCDC57Q2TAC2 916 aa6.88□□□□□ -1.31
CBWD1-212ENST00000475411 NBPF6Q5VWK0 638 aa6.88□□□□□ -1.31
CBWD1-212ENST00000475411 NBPF5PQ86XG9 351 aaPredicted RBP6.88□□□□□ -1.31
CBWD1-212ENST00000475411 ERC1Q8IUD2 1116 aa6.88□□□□□ -1.31
CBWD1-212ENST00000475411 CCAR1Q8IX12 1150 aaKnown RBP6.88□□□□□ -1.31
CBWD1-212ENST00000475411 NBPF4Q96M43 638 aa6.88□□□□□ -1.31
CBWD1-212ENST00000475411 SETDB2Q96T68 719 aa6.88□□□□□ -1.31
CBWD1-212ENST00000475411 HYPKQ9NX55 129 aa6.88□□□□□ -1.31
CBWD1-212ENST00000475411 TBC1D2BQ9UPU7 963 aa6.88□□□□□ -1.31
CBWD1-212ENST00000475411 DDX46Q7L014 1031 aaKnown RBP6.88□□□□□ -1.31
CBWD1-212ENST00000475411 ZNF622Q969S3 477 aaKnown RBP eCLIP6.88□□□□□ -1.31
CBWD1-212ENST00000475411 CCT4P50991 539 aaKnown RBP6.88□□□□□ -1.31
CBWD1-212ENST00000475411 WDR63Q8IWG1 891 aa6.88□□□□□ -1.31
CBWD1-212ENST00000475411 SEPT12Q8IYM1 358 aa6.88□□□□□ -1.31
CBWD1-212ENST00000475411 CDC5LQ99459 802 aaKnown RBP6.88□□□□□ -1.31
CBWD1-212ENST00000475411 CARD10Q9BWT7 1032 aa6.88□□□□□ -1.31
CBWD1-212ENST00000475411 SRCIN1Q9C0H9 1055 aa6.88□□□□□ -1.31
CBWD1-212ENST00000475411 SPHKAPQ2M3C7 1700 aa6.87□□□□□ -1.31
CBWD1-212ENST00000475411 FYB1O15117 783 aa6.87□□□□□ -1.31
CBWD1-212ENST00000475411 LAMC1P11047 1609 aa6.87□□□□□ -1.31
CBWD1-212ENST00000475411 ATP7BP35670 1465 aa6.87□□□□□ -1.31
CBWD1-212ENST00000475411 TOMM22Q9NS69 142 aa6.87□□□□□ -1.31
CBWD1-212ENST00000475411 ASXL1Q8IXJ9 1541 aa6.87□□□□□ -1.31
CBWD1-212ENST00000475411 A0A1W2PP64 1363 aa6.87□□□□□ -1.31
CBWD1-212ENST00000475411 AAMPQ13685 434 aa6.87□□□□□ -1.31
CBWD1-212ENST00000475411 SPATA31D1Q6ZQQ2 1576 aa6.87□□□□□ -1.31
CBWD1-212ENST00000475411 DDX17Q92841 729 aaKnown RBP6.86□□□□□ -1.31
CBWD1-212ENST00000475411 DBF4Q9UBU7 674 aaPredicted RBP6.86□□□□□ -1.31
CBWD1-212ENST00000475411 MAP3K19Q56UN5 1328 aa6.86□□□□□ -1.31
CBWD1-212ENST00000475411 BCORL1Q5H9F3 1711 aa6.86□□□□□ -1.31
CBWD1-212ENST00000475411 KIF24Q5T7B8 1368 aa6.86□□□□□ -1.31
CBWD1-212ENST00000475411 GNPATO15228 680 aa6.86□□□□□ -1.31
CBWD1-212ENST00000475411 PAXIP1Q6ZW49 1069 aaPredicted RBP6.86□□□□□ -1.31
CBWD1-212ENST00000475411 CCDC125Q86Z20 511 aa6.86□□□□□ -1.31
CBWD1-212ENST00000475411 IFT57Q9NWB7 429 aa6.86□□□□□ -1.31
CBWD1-212ENST00000475411 KIAA0232Q92628 1395 aa6.86□□□□□ -1.31
CBWD1-212ENST00000475411 ERC2O15083 957 aa6.86□□□□□ -1.31
CBWD1-212ENST00000475411 LMOD1P29536 600 aaPredicted RBP6.86□□□□□ -1.31
CBWD1-212ENST00000475411 BECN1Q14457 450 aa6.86□□□□□ -1.31
CBWD1-212ENST00000475411 GPR162Q16538 588 aa6.86□□□□□ -1.31
CBWD1-212ENST00000475411 MYO3AQ8NEV4 1616 aa6.86□□□□□ -1.31
CBWD1-212ENST00000475411 TPTE2Q6XPS3 522 aa6.86□□□□□ -1.31
CBWD1-212ENST00000475411 SLF2Q8IX21 1173 aa6.86□□□□□ -1.31
CBWD1-212ENST00000475411 RUFY2Q8WXA3 655 aa6.86□□□□□ -1.31
CBWD1-212ENST00000475411 JDP2Q8WYK2 163 aa6.86□□□□□ -1.31
CBWD1-212ENST00000475411 TRMT112Q9UI30 125 aaKnown RBP6.86□□□□□ -1.31
CBWD1-212ENST00000475411 WDR17Q8IZU2 1322 aa6.85□□□□□ -1.31
CBWD1-212ENST00000475411 TRIM6-TRIM34B2RNG4 842 aa6.85□□□□□ -1.31
CBWD1-212ENST00000475411 SLC3A2P08195 630 aaKnown RBP6.85□□□□□ -1.31
CBWD1-212ENST00000475411 TNNT3P45378 269 aaPredicted RBP6.85□□□□□ -1.31
CBWD1-212ENST00000475411 HSP90AB2PQ58FF8 381 aa6.85□□□□□ -1.31
CBWD1-212ENST00000475411 SPATA31E1Q6ZUB1 1445 aa6.85□□□□□ -1.31
CBWD1-212ENST00000475411 RICTORQ6R327 1708 aa6.85□□□□□ -1.31
CBWD1-212ENST00000475411 DZIP1LQ8IYY4 767 aaKnown RBP6.85□□□□□ -1.31
CBWD1-212ENST00000475411 CLUAP1Q96AJ1 413 aa6.85□□□□□ -1.31
CBWD1-212ENST00000475411 PLEKHH1Q9ULM0 1364 aa6.85□□□□□ -1.31
CBWD1-212ENST00000475411 FRMPD1Q5SYB0 1578 aa6.85□□□□□ -1.31
CBWD1-212ENST00000475411 PLIN1O60240 522 aa6.85□□□□□ -1.31
CBWD1-212ENST00000475411 MFAP1P55081 439 aaKnown RBP6.85□□□□□ -1.31
CBWD1-212ENST00000475411 EYA3Q99504 573 aa6.85□□□□□ -1.31
CBWD1-212ENST00000475411 MAP3K5Q99683 1374 aa6.85□□□□□ -1.31
CBWD1-212ENST00000475411 TMPOP42166 694 aaKnown RBP6.84□□□□□ -1.31
CBWD1-212ENST00000475411 RBM5P52756 815 aaKnown RBP eCLIP6.84□□□□□ -1.31
CBWD1-212ENST00000475411 CCDC158Q5M9N0 1113 aa6.84□□□□□ -1.31
CBWD1-212ENST00000475411 PREX1Q8TCU6 1659 aa6.84□□□□□ -1.31
CBWD1-212ENST00000475411 C1orf167Q5SNV9 1468 aa6.84□□□□□ -1.31
CBWD1-212ENST00000475411 NF2P35240 595 aa6.84□□□□□ -1.31
CBWD1-212ENST00000475411 PDE4CQ08493 712 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms