RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 ZCRB1Q8TBF4 217 aaKnown RBP34.9■■■■□ 3.18
TMEM54-205ENST00000475208 GGNBP2Q9H3C7 697 aa34.9■■■■□ 3.18
TMEM54-205ENST00000475208 FYB1O15117 783 aa34.89■■■■□ 3.18
TMEM54-205ENST00000475208 NSD2O96028 1365 aa34.87■■■■□ 3.17
TMEM54-205ENST00000475208 QSER1Q2KHR3 1735 aa34.87■■■■□ 3.17
TMEM54-205ENST00000475208 NBPF6Q5VWK0 638 aa34.85■■■■□ 3.17
TMEM54-205ENST00000475208 NBPF4Q96M43 638 aa34.85■■■■□ 3.17
TMEM54-205ENST00000475208 MAP3K5Q99683 1374 aa34.85■■■■□ 3.17
TMEM54-205ENST00000475208 SMG6Q86US8 1419 aaKnown RBP34.84■■■■□ 3.17
TMEM54-205ENST00000475208 KCNQ4P56696 695 aa34.84■■■■□ 3.17
TMEM54-205ENST00000475208 USHBP1Q8N6Y0 703 aa34.84■■■■□ 3.17
TMEM54-205ENST00000475208 LY75O60449 1722 aa34.84■■■■□ 3.17
TMEM54-205ENST00000475208 PNPLA7Q6ZV29 1317 aa34.82■■■■□ 3.17
TMEM54-205ENST00000475208 SLC16A10Q8TF71 515 aa34.82■■■■□ 3.16
TMEM54-205ENST00000475208 KIF20BQ96Q89 1820 aa34.82■■■■□ 3.16
TMEM54-205ENST00000475208 TUBGCP6Q96RT7 1819 aa34.81■■■■□ 3.16
TMEM54-205ENST00000475208 UTRNP46939 3433 aa34.81■■■■□ 3.16
TMEM54-205ENST00000475208 TFCP2L1Q9NZI6 479 aa34.8■■■■□ 3.16
TMEM54-205ENST00000475208 CGNL1Q0VF96 1302 aa34.8■■■■□ 3.16
TMEM54-205ENST00000475208 RAPGEF4Q8WZA2 1011 aa34.79■■■■□ 3.16
TMEM54-205ENST00000475208 CDCA8Q53HL2 280 aa34.78■■■■□ 3.16
TMEM54-205ENST00000475208 INSRP06213 1382 aa34.77■■■■□ 3.16
TMEM54-205ENST00000475208 TRIM26Q12899 539 aaPredicted RBP34.77■■■■□ 3.16
TMEM54-205ENST00000475208 POLD1P28340 1107 aa34.76■■■■□ 3.16
TMEM54-205ENST00000475208 HSP90AB2PQ58FF8 381 aa34.76■■■■□ 3.16
TMEM54-205ENST00000475208 CCNL1Q9UK58 526 aaPredicted RBP34.76■■■■□ 3.16
TMEM54-205ENST00000475208 FLT4P35916 1363 aa34.75■■■■□ 3.15
TMEM54-205ENST00000475208 COL24A1Q17RW2 1714 aa34.75■■■■□ 3.15
TMEM54-205ENST00000475208 TATP17735 454 aaPredicted RBP34.74■■■■□ 3.15
TMEM54-205ENST00000475208 KLHL34Q8N239 644 aa34.73■■■■□ 3.15
TMEM54-205ENST00000475208 ZNF784Q8NCA9 323 aaPredicted RBP34.73■■■■□ 3.15
TMEM54-205ENST00000475208 KIF24Q5T7B8 1368 aa34.73■■■■□ 3.15
TMEM54-205ENST00000475208 CHD4Q14839 1912 aa34.7■■■■□ 3.15
TMEM54-205ENST00000475208 PCDH11XQ9BZA7 1347 aa34.7■■■■□ 3.15
TMEM54-205ENST00000475208 PCDH11YQ9BZA8 1340 aa34.7■■■■□ 3.15
TMEM54-205ENST00000475208 NSD3Q9BZ95 1437 aa34.7■■■■□ 3.15
TMEM54-205ENST00000475208 CARD14Q9BXL6 1004 aa34.69■■■■□ 3.14
TMEM54-205ENST00000475208 GPR162Q16538 588 aa34.66■■■■□ 3.14
TMEM54-205ENST00000475208 EMILIN1Q9Y6C2 1016 aa34.65■■■■□ 3.14
TMEM54-205ENST00000475208 MSH5O43196 834 aa34.63■■■■□ 3.13
TMEM54-205ENST00000475208 COL23A1Q86Y22 540 aaPredicted RBP34.62■■■■□ 3.13
TMEM54-205ENST00000475208 C5P01031 1676 aa34.62■■■■□ 3.13
TMEM54-205ENST00000475208 CYP27B1O15528 508 aa34.61■■■■□ 3.13
TMEM54-205ENST00000475208 PALLDQ8WX93 1383 aa34.61■■■■□ 3.13
TMEM54-205ENST00000475208 PKD1L3Q7Z443 1732 aa34.59■■■■□ 3.13
TMEM54-205ENST00000475208 TOGARAM1Q9Y4F4 1720 aa34.59■■■■□ 3.13
TMEM54-205ENST00000475208 MPRIPQ6WCQ1 1025 aa34.59■■■■□ 3.13
TMEM54-205ENST00000475208 PELP1Q8IZL8 1130 aaKnown RBP34.59■■■■□ 3.13
TMEM54-205ENST00000475208 NLGN2Q8NFZ4 835 aa34.59■■■■□ 3.13
TMEM54-205ENST00000475208 ANKRD26Q9UPS8 1709 aa34.58■■■■□ 3.13
TMEM54-205ENST00000475208 NCAPD2Q15021 1401 aa34.57■■■■□ 3.13
TMEM54-205ENST00000475208 PPM1GO15355 546 aaPredicted RBP34.57■■■■□ 3.12
TMEM54-205ENST00000475208 MSL1Q68DK7 614 aa34.55■■■■□ 3.12
TMEM54-205ENST00000475208 TAF1LQ8IZX4 1826 aa34.54■■■■□ 3.12
TMEM54-205ENST00000475208 ITGB4P16144 1822 aa34.53■■■■□ 3.12
TMEM54-205ENST00000475208 TIMELESSQ9UNS1 1208 aa34.53■■■■□ 3.12
TMEM54-205ENST00000475208 HMGB2P26583 209 aaKnown RBP34.52■■■■□ 3.12
TMEM54-205ENST00000475208 GOLGB1Q14789 3259 aaKnown RBP34.51■■■■□ 3.12
TMEM54-205ENST00000475208 WASHC2AQ641Q2 1341 aa34.51■■■■□ 3.11
TMEM54-205ENST00000475208 SMARCC1Q92922 1105 aaPredicted RBP34.5■■■■□ 3.11
TMEM54-205ENST00000475208 SPG7Q9UQ90 795 aa34.49■■■■□ 3.11
TMEM54-205ENST00000475208 C4BP0C0L5 1744 aa34.49■■■■□ 3.11
TMEM54-205ENST00000475208 FLAD1Q8NFF5 587 aa34.48■■■■□ 3.11
TMEM54-205ENST00000475208 MAP2P11137 1827 aaKnown RBP34.47■■■■□ 3.11
TMEM54-205ENST00000475208 NKX1-1Q15270 411 aaPredicted RBP34.47■■■■□ 3.11
TMEM54-205ENST00000475208 PIGBQ92521 554 aa34.47■■■■□ 3.11
TMEM54-205ENST00000475208 EYA1Q99502 592 aa34.47■■■■□ 3.11
TMEM54-205ENST00000475208 AK7Q96M32 723 aa34.45■■■■□ 3.11
TMEM54-205ENST00000475208 POLR3GLQ9BT43 218 aa34.45■■■■□ 3.11
TMEM54-205ENST00000475208 POLKQ9UBT6 870 aa34.44■■■■□ 3.1
TMEM54-205ENST00000475208 YBX3P16989 372 aaKnown RBP eCLIP34.43■■■■□ 3.13e-6■□□□□ 9.2
TMEM54-205ENST00000475208 CLSPNQ9HAW4 1339 aa34.41■■■■□ 3.1
TMEM54-205ENST00000475208 AMIGO3Q86WK7 504 aa34.41■■■■□ 3.1
TMEM54-205ENST00000475208 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP34.41■■■■□ 3.1
TMEM54-205ENST00000475208 UBR3Q6ZT12 1888 aa34.39■■■■□ 3.1
TMEM54-205ENST00000475208 GRIN3BO60391 1043 aa34.39■■■■□ 3.1
TMEM54-205ENST00000475208 C1QTNF8P60827 252 aa34.39■■■■□ 3.1
TMEM54-205ENST00000475208 PHF14O94880 888 aa34.38■■■■□ 3.09
TMEM54-205ENST00000475208 TMOD3Q9NYL9 352 aa34.38■■■■□ 3.09
TMEM54-205ENST00000475208 CD2APQ9Y5K6 639 aa34.38■■■■□ 3.09
TMEM54-205ENST00000475208 LOC102724428A0A0B4J2F2 783 aa34.37■■■■□ 3.09
TMEM54-205ENST00000475208 TNNT2P45379 298 aaPredicted RBP34.37■■■■□ 3.09
TMEM54-205ENST00000475208 SIK1P57059 783 aa34.37■■■■□ 3.09
TMEM54-205ENST00000475208 PCGF6Q9BYE7 350 aa34.37■■■■□ 3.09
TMEM54-205ENST00000475208 PHKG2P15735 406 aa34.36■■■■□ 3.09
TMEM54-205ENST00000475208 EIF4A2Q14240 407 aaKnown RBP34.36■■■■□ 3.09
TMEM54-205ENST00000475208 IFNL2Q8IZJ0 200 aa34.36■■■■□ 3.09
TMEM54-205ENST00000475208 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP34.35■■■■□ 3.09
TMEM54-205ENST00000475208 SMIM5Q71RC9 77 aa34.35■■■■□ 3.09
TMEM54-205ENST00000475208 LINC00116Q8NCU8 138 aa34.35■■■■□ 3.09
TMEM54-205ENST00000475208 SENP3-EIF4A1A0A087X0R7 540 aa34.33■■■■□ 3.09
TMEM54-205ENST00000475208 ASAP1Q9ULH1 1129 aa34.33■■■■□ 3.09
TMEM54-205ENST00000475208 GIGYF1O75420 1035 aaPredicted RBP34.32■■■■□ 3.08
TMEM54-205ENST00000475208 SSFA2P28290 1259 aa34.32■■■■□ 3.08
TMEM54-205ENST00000475208 PLEKHG2Q9H7P9 1386 aa34.29■■■■□ 3.08
TMEM54-205ENST00000475208 ITPK1Q13572 414 aa34.29■■■■□ 3.08
TMEM54-205ENST00000475208 GNPATO15228 680 aa34.27■■■■□ 3.08
TMEM54-205ENST00000475208 ATP6V1AP38606 617 aa34.27■■■■□ 3.08
TMEM54-205ENST00000475208 EIF4G2P78344 907 aaKnown RBP eCLIP34.27■■■■□ 3.08
TMEM54-205ENST00000475208 ATG3Q9NT62 314 aa34.27■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms