RNA–Protein interactions for RNA: ENST00000474873.5

HPS1-210, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 2

Gene HPS1, Length 698 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-210ENST00000474873 OVOS2A0A0G2JMS6 1433 aa10.81□□□□□ -0.68
HPS1-210ENST00000474873 BCL9O00512 1426 aa10.81□□□□□ -0.68
HPS1-210ENST00000474873 PLEKHG2Q9H7P9 1386 aa10.8□□□□□ -0.68
HPS1-210ENST00000474873 MEGF6O75095 1541 aa10.8□□□□□ -0.68
HPS1-210ENST00000474873 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.8□□□□□ -0.68
HPS1-210ENST00000474873 SF3B2Q13435 895 aaKnown RBP10.79□□□□□ -0.68
HPS1-210ENST00000474873 DDX54Q8TDD1 881 aaKnown RBP10.79□□□□□ -0.68
HPS1-210ENST00000474873 KDRP35968 1356 aa10.78□□□□□ -0.68
HPS1-210ENST00000474873 TRIM37O94972 964 aa10.78□□□□□ -0.68
HPS1-210ENST00000474873 SULT6B1Q6IMI4 303 aa10.78□□□□□ -0.68
HPS1-210ENST00000474873 SPG7Q9UQ90 795 aa10.78□□□□□ -0.68
HPS1-210ENST00000474873 NUDCQ9Y266 331 aa10.78□□□□□ -0.68
HPS1-210ENST00000474873 COL3A1P02461 1466 aaPredicted RBP10.78□□□□□ -0.68
HPS1-210ENST00000474873 AMOTQ4VCS5 1084 aa10.77□□□□□ -0.69
HPS1-210ENST00000474873 AEBP1Q8IUX7 1158 aa10.77□□□□□ -0.69
HPS1-210ENST00000474873 BCL11BQ9C0K0 894 aaPredicted RBP10.77□□□□□ -0.69
HPS1-210ENST00000474873 PRKRIP1Q9H875 184 aaPredicted RBP10.77□□□□□ -0.69
HPS1-210ENST00000474873 PCDH11XQ9BZA7 1347 aa10.77□□□□□ -0.69
HPS1-210ENST00000474873 PCDH11YQ9BZA8 1340 aa10.77□□□□□ -0.69
HPS1-210ENST00000474873 RGPD1P0DJD0 1748 aa10.76□□□□□ -0.69
HPS1-210ENST00000474873 SENP3-EIF4A1A0A087X0R7 540 aa10.76□□□□□ -0.69
HPS1-210ENST00000474873 U2SURPO15042 1029 aaKnown RBP10.76□□□□□ -0.69
HPS1-210ENST00000474873 CYP27B1O15528 508 aa10.76□□□□□ -0.69
HPS1-210ENST00000474873 PLEKHO1Q53GL0 409 aaPredicted RBP10.76□□□□□ -0.69
HPS1-210ENST00000474873 MYBBP1AQ9BQG0 1328 aaKnown RBP10.76□□□□□ -0.69
HPS1-210ENST00000474873 HMOX1P09601 288 aa10.75□□□□□ -0.69
HPS1-210ENST00000474873 BAG6P46379 1132 aa10.75□□□□□ -0.69
HPS1-210ENST00000474873 NKX1-1Q15270 411 aaPredicted RBP10.75□□□□□ -0.69
HPS1-210ENST00000474873 APBA3O96018 575 aa10.74□□□□□ -0.69
HPS1-210ENST00000474873 IFNL2Q8IZJ0 200 aa10.74□□□□□ -0.69
HPS1-210ENST00000474873 PKD1L3Q7Z443 1732 aa10.73□□□□□ -0.69
HPS1-210ENST00000474873 KCNQ2O43526 872 aa10.73□□□□□ -0.69
HPS1-210ENST00000474873 FCHSD2O94868 740 aa10.73□□□□□ -0.69
HPS1-210ENST00000474873 U2AF1L5P0DN76 240 aaPredicted RBP10.73□□□□□ -0.69
HPS1-210ENST00000474873 PHKG2P15735 406 aa10.73□□□□□ -0.69
HPS1-210ENST00000474873 U2AF1Q01081 240 aaKnown RBP eCLIP10.73□□□□□ -0.69
HPS1-210ENST00000474873 PTF1AQ7RTS3 328 aa10.73□□□□□ -0.69
HPS1-210ENST00000474873 DEFB132Q7Z7B7 95 aa10.73□□□□□ -0.69
HPS1-210ENST00000474873 ACSBG1Q96GR2 724 aa10.73□□□□□ -0.69
HPS1-210ENST00000474873 SHANK3Q9BYB0 1731 aa10.72□□□□□ -0.69
HPS1-210ENST00000474873 SBF2Q86WG5 1849 aa10.72□□□□□ -0.69
HPS1-210ENST00000474873 PLSCR1O15162 318 aa10.72□□□□□ -0.69
HPS1-210ENST00000474873 HSP90AB1P08238 724 aaKnown RBP10.72□□□□□ -0.69
HPS1-210ENST00000474873 PRIM1P49642 420 aaKnown RBP10.72□□□□□ -0.69
HPS1-210ENST00000474873 EN1Q05925 392 aaPredicted RBP10.72□□□□□ -0.69
HPS1-210ENST00000474873 ZNF530Q6P9A1 599 aaPredicted RBP10.72□□□□□ -0.69
HPS1-210ENST00000474873 CAMKK2Q96RR4 588 aa10.72□□□□□ -0.69
HPS1-210ENST00000474873 KAT6BQ8WYB5 2073 aa10.72□□□□□ -0.69
HPS1-210ENST00000474873 ANP32CO43423 234 aa10.71□□□□□ -0.69
HPS1-210ENST00000474873 C1orf141Q5JVX7 400 aa10.71□□□□□ -0.69
HPS1-210ENST00000474873 SYTL4Q96C24 671 aaPredicted RBP10.71□□□□□ -0.69
HPS1-210ENST00000474873 DCAF5Q96JK2 942 aa10.71□□□□□ -0.69
HPS1-210ENST00000474873 RSPH6AQ9H0K4 717 aa10.71□□□□□ -0.69
HPS1-210ENST00000474873 TNS1Q9HBL0 1735 aaKnown RBP10.7□□□□□ -0.7
HPS1-210ENST00000474873 PRKAR2BP31323 418 aa10.7□□□□□ -0.7
HPS1-210ENST00000474873 NHSQ6T4R5 1651 aa10.69□□□□□ -0.7
HPS1-210ENST00000474873 ERVV-2B6SEH9 535 aa10.69□□□□□ -0.7
HPS1-210ENST00000474873 EZH2Q15910 746 aaKnown RBP10.69□□□□□ -0.7
HPS1-210ENST00000474873 MTHFSDQ2M296 383 aaKnown RBP10.69□□□□□ -0.7
HPS1-210ENST00000474873 AKAP4Q5JQC9 854 aa10.69□□□□□ -0.7
HPS1-210ENST00000474873 PNNQ9H307 717 aaKnown RBP10.69□□□□□ -0.7
HPS1-210ENST00000474873 MPRIPQ6WCQ1 1025 aa10.68□□□□□ -0.7
HPS1-210ENST00000474873 GAS2L2Q8NHY3 880 aa10.68□□□□□ -0.7
HPS1-210ENST00000474873 PHACTR3Q96KR7 559 aa10.68□□□□□ -0.7
HPS1-210ENST00000474873 NEFMP07197 916 aa10.67□□□□□ -0.7
HPS1-210ENST00000474873 PROM2Q8N271 834 aa10.67□□□□□ -0.7
HPS1-210ENST00000474873 PIGBQ92521 554 aa10.67□□□□□ -0.7
HPS1-210ENST00000474873 TMOD3Q9NYL9 352 aa10.67□□□□□ -0.7
HPS1-210ENST00000474873 GNAT3A8MTJ3 354 aa10.66□□□□□ -0.7
HPS1-210ENST00000474873 CABP4P57796 275 aa10.66□□□□□ -0.7
HPS1-210ENST00000474873 WDR43Q15061 677 aaKnown RBP eCLIP10.66□□□□□ -0.7
HPS1-210ENST00000474873 TXNRD1Q16881 649 aa10.66□□□□□ -0.7
HPS1-210ENST00000474873 PLEKHF1Q96S99 279 aa10.66□□□□□ -0.7
HPS1-210ENST00000474873 DOT1LQ8TEK3 1739 aa10.66□□□□□ -0.7
HPS1-210ENST00000474873 KDM6AO15550 1401 aaPredicted RBP10.66□□□□□ -0.7
HPS1-210ENST00000474873 RGPD3A6NKT7 1758 aaPredicted RBP10.65□□□□□ -0.7
HPS1-210ENST00000474873 RGPD4Q7Z3J3 1758 aa10.65□□□□□ -0.7
HPS1-210ENST00000474873 RNMTO43148 476 aaKnown RBP10.65□□□□□ -0.7
HPS1-210ENST00000474873 SMARCC1Q92922 1105 aaPredicted RBP10.65□□□□□ -0.7
HPS1-210ENST00000474873 LGR6Q9HBX8 967 aa10.65□□□□□ -0.7
HPS1-210ENST00000474873 BTAF1O14981 1849 aa10.65□□□□□ -0.71
HPS1-210ENST00000474873 HMGB2P26583 209 aaKnown RBP10.64□□□□□ -0.71
HPS1-210ENST00000474873 SLC27A3Q5K4L6 730 aa10.64□□□□□ -0.71
HPS1-210ENST00000474873 NBPF14Q5TI25 921 aa10.64□□□□□ -0.71
HPS1-210ENST00000474873 NFATC2IPQ8NCF5 419 aa10.64□□□□□ -0.71
HPS1-210ENST00000474873 ADAMTS8Q9UP79 889 aa10.64□□□□□ -0.71
HPS1-210ENST00000474873 TOGARAM1Q9Y4F4 1720 aa10.64□□□□□ -0.71
HPS1-210ENST00000474873 MAP3K5Q99683 1374 aa10.64□□□□□ -0.71
HPS1-210ENST00000474873 MAPK8IP3Q9UPT6 1336 aa10.63□□□□□ -0.71
HPS1-210ENST00000474873 HTATSF1O43719 755 aaKnown RBP10.63□□□□□ -0.71
HPS1-210ENST00000474873 IL17REQ8NFR9 667 aa10.63□□□□□ -0.71
HPS1-210ENST00000474873 SLC52A2Q9HAB3 445 aa10.63□□□□□ -0.71
HPS1-210ENST00000474873 ATG3Q9NT62 314 aa10.63□□□□□ -0.71
HPS1-210ENST00000474873 ITGB4P16144 1822 aa10.63□□□□□ -0.71
HPS1-210ENST00000474873 NFE2L2Q16236 605 aa10.62□□□□□ -0.71
HPS1-210ENST00000474873 CCDC184Q52MB2 194 aa10.62□□□□□ -0.71
HPS1-210ENST00000474873 MRS2Q9HD23 443 aa10.62□□□□□ -0.71
HPS1-210ENST00000474873 LRRC4BQ9NT99 713 aa10.62□□□□□ -0.71
HPS1-210ENST00000474873 ASAP1Q9ULH1 1129 aa10.62□□□□□ -0.71
HPS1-210ENST00000474873 PALLDQ8WX93 1383 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms