RNA–Protein interactions for RNA: ENST00000474837.5

SFMBT1-203, Transcript of Scm like with four mbt domains 1, humanhuman

TSL 4

Gene SFMBT1, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFMBT1-203ENST00000474837 TESK2Q96S53 571 aa22.62■■□□□ 1.21
SFMBT1-203ENST00000474837 FAM208AQ9UK61 1670 aaKnown RBP22.62■■□□□ 1.21
SFMBT1-203ENST00000474837 C1QTNF8P60827 252 aa22.61■■□□□ 1.21
SFMBT1-203ENST00000474837 CCNL1Q9UK58 526 aaPredicted RBP22.61■■□□□ 1.21
SFMBT1-203ENST00000474837 RTL1A6NKG5 1358 aa22.61■■□□□ 1.21
SFMBT1-203ENST00000474837 KAT6BQ8WYB5 2073 aa22.61■■□□□ 1.21
SFMBT1-203ENST00000474837 PELP1Q8IZL8 1130 aaKnown RBP22.6■■□□□ 1.21
SFMBT1-203ENST00000474837 SENP3-EIF4A1A0A087X0R7 540 aa22.59■■□□□ 1.21
SFMBT1-203ENST00000474837 RAPGEF4Q8WZA2 1011 aa22.59■■□□□ 1.21
SFMBT1-203ENST00000474837 USP47Q96K76 1375 aa22.59■■□□□ 1.21
SFMBT1-203ENST00000474837 KCNQ4P56696 695 aa22.58■■□□□ 1.21
SFMBT1-203ENST00000474837 SMG6Q86US8 1419 aaKnown RBP22.57■■□□□ 1.2
SFMBT1-203ENST00000474837 MSH5O43196 834 aa22.57■■□□□ 1.2
SFMBT1-203ENST00000474837 FBLN1P23142 703 aa22.57■■□□□ 1.2
SFMBT1-203ENST00000474837 NSD2O96028 1365 aa22.56■■□□□ 1.2
SFMBT1-203ENST00000474837 GRIN3BO60391 1043 aa22.56■■□□□ 1.2
SFMBT1-203ENST00000474837 CHD4Q14839 1912 aa22.55■■□□□ 1.2
SFMBT1-203ENST00000474837 TATP17735 454 aaPredicted RBP22.55■■□□□ 1.2
SFMBT1-203ENST00000474837 RRS1Q15050 365 aaKnown RBP22.55■■□□□ 1.2
SFMBT1-203ENST00000474837 NBPF6Q5VWK0 638 aa22.55■■□□□ 1.2
SFMBT1-203ENST00000474837 NBPF4Q96M43 638 aa22.55■■□□□ 1.2
SFMBT1-203ENST00000474837 QSER1Q2KHR3 1735 aa22.54■■□□□ 1.2
SFMBT1-203ENST00000474837 MEGF6O75095 1541 aa22.54■■□□□ 1.2
SFMBT1-203ENST00000474837 GIGYF1O75420 1035 aaPredicted RBP22.54■■□□□ 1.2
SFMBT1-203ENST00000474837 TMF1P82094 1093 aa22.54■■□□□ 1.2
SFMBT1-203ENST00000474837 FYB1O15117 783 aa22.53■■□□□ 1.2
SFMBT1-203ENST00000474837 FLAD1Q8NFF5 587 aa22.53■■□□□ 1.2
SFMBT1-203ENST00000474837 COL23A1Q86Y22 540 aaPredicted RBP22.52■■□□□ 1.2
SFMBT1-203ENST00000474837 NLGN2Q8NFZ4 835 aa22.52■■□□□ 1.2
SFMBT1-203ENST00000474837 GGNBP2Q9H3C7 697 aa22.52■■□□□ 1.2
SFMBT1-203ENST00000474837 PCDH11XQ9BZA7 1347 aa22.52■■□□□ 1.2
SFMBT1-203ENST00000474837 PCDH11YQ9BZA8 1340 aa22.52■■□□□ 1.2
SFMBT1-203ENST00000474837 CDCA8Q53HL2 280 aa22.51■■□□□ 1.19
SFMBT1-203ENST00000474837 USHBP1Q8N6Y0 703 aa22.5■■□□□ 1.19
SFMBT1-203ENST00000474837 KIF24Q5T7B8 1368 aa22.5■■□□□ 1.19
SFMBT1-203ENST00000474837 INSRP06213 1382 aa22.49■■□□□ 1.19
SFMBT1-203ENST00000474837 DOT1LQ8TEK3 1739 aa22.48■■□□□ 1.19
SFMBT1-203ENST00000474837 LY75O60449 1722 aa22.48■■□□□ 1.19
SFMBT1-203ENST00000474837 COL24A1Q17RW2 1714 aa22.48■■□□□ 1.19
SFMBT1-203ENST00000474837 SMARCC1Q92922 1105 aaPredicted RBP22.47■■□□□ 1.19
SFMBT1-203ENST00000474837 FLT4P35916 1363 aa22.47■■□□□ 1.19
SFMBT1-203ENST00000474837 HSP90AB2PQ58FF8 381 aa22.46■■□□□ 1.19
SFMBT1-203ENST00000474837 CD2APQ9Y5K6 639 aa22.46■■□□□ 1.19
SFMBT1-203ENST00000474837 MSL1Q68DK7 614 aa22.45■■□□□ 1.18
SFMBT1-203ENST00000474837 MPRIPQ6WCQ1 1025 aa22.45■■□□□ 1.18
SFMBT1-203ENST00000474837 PALLDQ8WX93 1383 aa22.45■■□□□ 1.18
SFMBT1-203ENST00000474837 YBX3P16989 372 aaKnown RBP eCLIP22.44■■□□□ 1.18
SFMBT1-203ENST00000474837 AK7Q96M32 723 aa22.42■■□□□ 1.18
SFMBT1-203ENST00000474837 SHANK3Q9BYB0 1731 aa22.42■■□□□ 1.18
SFMBT1-203ENST00000474837 CYP27B1O15528 508 aa22.4■■□□□ 1.18
SFMBT1-203ENST00000474837 TUBGCP6Q96RT7 1819 aa22.4■■□□□ 1.18
SFMBT1-203ENST00000474837 NSD3Q9BZ95 1437 aa22.4■■□□□ 1.18
SFMBT1-203ENST00000474837 SPG7Q9UQ90 795 aa22.39■■□□□ 1.17
SFMBT1-203ENST00000474837 RGPD2P0DJD1 1756 aa22.39■■□□□ 1.17
SFMBT1-203ENST00000474837 NKX1-1Q15270 411 aaPredicted RBP22.37■■□□□ 1.17
SFMBT1-203ENST00000474837 PIGBQ92521 554 aa22.36■■□□□ 1.17
SFMBT1-203ENST00000474837 EMILIN1Q9Y6C2 1016 aa22.36■■□□□ 1.17
SFMBT1-203ENST00000474837 GOLGB1Q14789 3259 aaKnown RBP22.35■■□□□ 1.17
SFMBT1-203ENST00000474837 SSFA2P28290 1259 aa22.35■■□□□ 1.17
SFMBT1-203ENST00000474837 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.35■■□□□ 1.17
SFMBT1-203ENST00000474837 PPM1GO15355 546 aaPredicted RBP22.34■■□□□ 1.17
SFMBT1-203ENST00000474837 GPBP1L1Q9HC44 474 aaPredicted RBP22.34■■□□□ 1.17
SFMBT1-203ENST00000474837 C5P01031 1676 aa22.33■■□□□ 1.17
SFMBT1-203ENST00000474837 ATP10DQ9P241 1426 aa22.33■■□□□ 1.17
SFMBT1-203ENST00000474837 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.33■■□□□ 1.17
SFMBT1-203ENST00000474837 PHF14O94880 888 aa22.33■■□□□ 1.17
SFMBT1-203ENST00000474837 LOC102724428A0A0B4J2F2 783 aa22.32■■□□□ 1.16
SFMBT1-203ENST00000474837 SIK1P57059 783 aa22.32■■□□□ 1.16
SFMBT1-203ENST00000474837 CARD14Q9BXL6 1004 aa22.32■■□□□ 1.16
SFMBT1-203ENST00000474837 TMOD3Q9NYL9 352 aa22.32■■□□□ 1.16
SFMBT1-203ENST00000474837 WASHC2AQ641Q2 1341 aa22.31■■□□□ 1.16
SFMBT1-203ENST00000474837 IFNL2Q8IZJ0 200 aa22.3■■□□□ 1.16
SFMBT1-203ENST00000474837 NCAPD2Q15021 1401 aa22.3■■□□□ 1.16
SFMBT1-203ENST00000474837 IGSF1Q8N6C5 1336 aa22.3■■□□□ 1.16
SFMBT1-203ENST00000474837 EYA1Q99502 592 aa22.29■■□□□ 1.16
SFMBT1-203ENST00000474837 C4BP0C0L5 1744 aa22.28■■□□□ 1.16
SFMBT1-203ENST00000474837 ATP6V1AP38606 617 aa22.28■■□□□ 1.16
SFMBT1-203ENST00000474837 KIF20BQ96Q89 1820 aa22.27■■□□□ 1.16
SFMBT1-203ENST00000474837 LINC00116Q8NCU8 138 aa22.27■■□□□ 1.16
SFMBT1-203ENST00000474837 GNPATO15228 680 aa22.26■■□□□ 1.15
SFMBT1-203ENST00000474837 PHKG2P15735 406 aa22.26■■□□□ 1.15
SFMBT1-203ENST00000474837 AMIGO3Q86WK7 504 aa22.26■■□□□ 1.15
SFMBT1-203ENST00000474837 ADCY9O60503 1353 aa22.25■■□□□ 1.15
SFMBT1-203ENST00000474837 PLEKHG2Q9H7P9 1386 aa22.25■■□□□ 1.15
SFMBT1-203ENST00000474837 PKD1L3Q7Z443 1732 aa22.24■■□□□ 1.15
SFMBT1-203ENST00000474837 POLKQ9UBT6 870 aa22.24■■□□□ 1.15
SFMBT1-203ENST00000474837 ASAP1Q9ULH1 1129 aa22.24■■□□□ 1.15
SFMBT1-203ENST00000474837 TIMELESSQ9UNS1 1208 aa22.24■■□□□ 1.15
SFMBT1-203ENST00000474837 TAF1LQ8IZX4 1826 aa22.24■■□□□ 1.15
SFMBT1-203ENST00000474837 ITPK1Q13572 414 aa22.22■■□□□ 1.15
SFMBT1-203ENST00000474837 SMIM5Q71RC9 77 aa22.22■■□□□ 1.15
SFMBT1-203ENST00000474837 ZNF526Q8TF50 670 aaPredicted RBP22.22■■□□□ 1.15
SFMBT1-203ENST00000474837 TOGARAM1Q9Y4F4 1720 aa22.22■■□□□ 1.15
SFMBT1-203ENST00000474837 HSP90AB1P08238 724 aaKnown RBP22.21■■□□□ 1.15
SFMBT1-203ENST00000474837 HSPA6P17066 643 aa22.21■■□□□ 1.15
SFMBT1-203ENST00000474837 TRAPPC3LQ5T215 181 aa22.21■■□□□ 1.15
SFMBT1-203ENST00000474837 IFFO2Q5TF58 517 aa22.21■■□□□ 1.15
SFMBT1-203ENST00000474837 ATG3Q9NT62 314 aa22.21■■□□□ 1.15
SFMBT1-203ENST00000474837 RTCBQ9Y3I0 505 aaKnown RBP22.21■■□□□ 1.15
SFMBT1-203ENST00000474837 NLGN1Q8N2Q7 840 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms