RNA–Protein interactions for RNA: ENST00000474823.5

COPS6-208, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 2

Gene COPS6, Length 752 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-208ENST00000474823 DDX54Q8TDD1 881 aaKnown RBP14.1□□□□□ -0.15
COPS6-208ENST00000474823 SPG7Q9UQ90 795 aa14.1□□□□□ -0.15
COPS6-208ENST00000474823 SF3B2Q13435 895 aaKnown RBP14.09□□□□□ -0.15
COPS6-208ENST00000474823 MARCH10Q8NA82 808 aaPredicted RBP14.09□□□□□ -0.15
COPS6-208ENST00000474823 COL3A1P02461 1466 aaPredicted RBP14.09□□□□□ -0.15
COPS6-208ENST00000474823 HMOX1P09601 288 aa14.08□□□□□ -0.16
COPS6-208ENST00000474823 CCDC125Q86Z20 511 aa14.08□□□□□ -0.16
COPS6-208ENST00000474823 AEBP1Q8IUX7 1158 aa14.08□□□□□ -0.16
COPS6-208ENST00000474823 UPF1Q92900 1129 aaKnown RBP eCLIP14.08□□□□□ -0.16
COPS6-208ENST00000474823 PCDH11XQ9BZA7 1347 aa14.08□□□□□ -0.16
COPS6-208ENST00000474823 PCDH11YQ9BZA8 1340 aa14.08□□□□□ -0.16
COPS6-208ENST00000474823 U2AF1L5P0DN76 240 aaPredicted RBP14.07□□□□□ -0.16
COPS6-208ENST00000474823 U2AF1Q01081 240 aaKnown RBP eCLIP14.07□□□□□ -0.16
COPS6-208ENST00000474823 PLEKHO1Q53GL0 409 aaPredicted RBP14.07□□□□□ -0.16
COPS6-208ENST00000474823 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.07□□□□□ -0.16
COPS6-208ENST00000474823 KDRP35968 1356 aa14.07□□□□□ -0.16
COPS6-208ENST00000474823 PLEKHG2Q9H7P9 1386 aa14.07□□□□□ -0.16
COPS6-208ENST00000474823 AMOTQ4VCS5 1084 aa14.06□□□□□ -0.16
COPS6-208ENST00000474823 RGPD1P0DJD0 1748 aa14.06□□□□□ -0.16
COPS6-208ENST00000474823 TRIM37O94972 964 aa14.05□□□□□ -0.16
COPS6-208ENST00000474823 BCL9O00512 1426 aa14.04□□□□□ -0.16
COPS6-208ENST00000474823 CYP27B1O15528 508 aa14.03□□□□□ -0.16
COPS6-208ENST00000474823 NEFMP07197 916 aa14.03□□□□□ -0.16
COPS6-208ENST00000474823 C1orf141Q5JVX7 400 aa14.03□□□□□ -0.16
COPS6-208ENST00000474823 ZNF530Q6P9A1 599 aaPredicted RBP14.03□□□□□ -0.16
COPS6-208ENST00000474823 IFNL2Q8IZJ0 200 aa14.03□□□□□ -0.16
COPS6-208ENST00000474823 PKD1L3Q7Z443 1732 aa14.02□□□□□ -0.16
COPS6-208ENST00000474823 FCHSD2O94868 740 aa14.02□□□□□ -0.17
COPS6-208ENST00000474823 ACSBG1Q96GR2 724 aa14.02□□□□□ -0.17
COPS6-208ENST00000474823 PNNQ9H307 717 aaKnown RBP14.02□□□□□ -0.17
COPS6-208ENST00000474823 HSP90AB1P08238 724 aaKnown RBP14.01□□□□□ -0.17
COPS6-208ENST00000474823 PHKG2P15735 406 aa14.01□□□□□ -0.17
COPS6-208ENST00000474823 PRKAR2BP31323 418 aa14.01□□□□□ -0.17
COPS6-208ENST00000474823 BAG6P46379 1132 aa14.01□□□□□ -0.17
COPS6-208ENST00000474823 WDR43Q15061 677 aaKnown RBP eCLIP14.01□□□□□ -0.175e-7■■□□□ 13.9
COPS6-208ENST00000474823 SYTL4Q96C24 671 aaPredicted RBP14.01□□□□□ -0.17
COPS6-208ENST00000474823 BCL11BQ9C0K0 894 aaPredicted RBP14.01□□□□□ -0.17
COPS6-208ENST00000474823 KAT6BQ8WYB5 2073 aa14.01□□□□□ -0.17
COPS6-208ENST00000474823 APBA3O96018 575 aa14□□□□□ -0.17
COPS6-208ENST00000474823 RSPH6AQ9H0K4 717 aa14□□□□□ -0.17
COPS6-208ENST00000474823 SHANK3Q9BYB0 1731 aa14□□□□□ -0.17
COPS6-208ENST00000474823 EP400Q96L91 3159 aa13.99□□□□□ -0.17
COPS6-208ENST00000474823 NKX1-1Q15270 411 aaPredicted RBP13.99□□□□□ -0.17
COPS6-208ENST00000474823 GAS2L2Q8NHY3 880 aa13.99□□□□□ -0.17
COPS6-208ENST00000474823 KCNQ2O43526 872 aa13.98□□□□□ -0.17
COPS6-208ENST00000474823 PRIM1P49642 420 aaKnown RBP13.98□□□□□ -0.17
COPS6-208ENST00000474823 MTHFSDQ2M296 383 aaKnown RBP13.98□□□□□ -0.17
COPS6-208ENST00000474823 AKAP4Q5JQC9 854 aa13.98□□□□□ -0.17
COPS6-208ENST00000474823 DCAF5Q96JK2 942 aa13.98□□□□□ -0.17
COPS6-208ENST00000474823 SBF2Q86WG5 1849 aa13.97□□□□□ -0.17
COPS6-208ENST00000474823 MAPK8IP3Q9UPT6 1336 aa13.97□□□□□ -0.17
COPS6-208ENST00000474823 DEFB132Q7Z7B7 95 aa13.97□□□□□ -0.17
COPS6-208ENST00000474823 EN1Q05925 392 aaPredicted RBP13.96□□□□□ -0.17
COPS6-208ENST00000474823 MRS2Q9HD23 443 aa13.96□□□□□ -0.17
COPS6-208ENST00000474823 NHSQ6T4R5 1651 aa13.95□□□□□ -0.18
COPS6-208ENST00000474823 DIEXFQ68CQ4 756 aaKnown RBP13.95□□□□□ -0.18
COPS6-208ENST00000474823 MPRIPQ6WCQ1 1025 aa13.95□□□□□ -0.18
COPS6-208ENST00000474823 PTF1AQ7RTS3 328 aa13.95□□□□□ -0.18
COPS6-208ENST00000474823 PHACTR3Q96KR7 559 aa13.95□□□□□ -0.18
COPS6-208ENST00000474823 TMOD3Q9NYL9 352 aa13.95□□□□□ -0.18
COPS6-208ENST00000474823 DOT1LQ8TEK3 1739 aa13.95□□□□□ -0.18
COPS6-208ENST00000474823 TNS1Q9HBL0 1735 aaKnown RBP13.95□□□□□ -0.18
COPS6-208ENST00000474823 GNAT3A8MTJ3 354 aa13.94□□□□□ -0.18
COPS6-208ENST00000474823 ERVV-2B6SEH9 535 aa13.94□□□□□ -0.18
COPS6-208ENST00000474823 PLSCR1O15162 318 aa13.94□□□□□ -0.18
COPS6-208ENST00000474823 CABP4P57796 275 aa13.94□□□□□ -0.18
COPS6-208ENST00000474823 EZH2Q15910 746 aaKnown RBP13.93□□□□□ -0.18
COPS6-208ENST00000474823 CCDC184Q52MB2 194 aa13.93□□□□□ -0.18
COPS6-208ENST00000474823 RTF1Q92541 710 aaKnown RBP13.93□□□□□ -0.18
COPS6-208ENST00000474823 PLEKHF1Q96S99 279 aa13.93□□□□□ -0.18
COPS6-208ENST00000474823 ADAMTS8Q9UP79 889 aa13.93□□□□□ -0.18
COPS6-208ENST00000474823 MAP3K5Q99683 1374 aa13.93□□□□□ -0.18
COPS6-208ENST00000474823 CAMKK2Q96RR4 588 aa13.92□□□□□ -0.18
COPS6-208ENST00000474823 KDM6AO15550 1401 aaPredicted RBP13.91□□□□□ -0.18
COPS6-208ENST00000474823 RNMTO43148 476 aaKnown RBP13.91□□□□□ -0.18
COPS6-208ENST00000474823 CCDC146Q8IYE0 955 aa13.91□□□□□ -0.18
COPS6-208ENST00000474823 PIGBQ92521 554 aa13.91□□□□□ -0.18
COPS6-208ENST00000474823 SMARCC1Q92922 1105 aaPredicted RBP13.91□□□□□ -0.18
COPS6-208ENST00000474823 RUNDC1Q96C34 613 aa13.91□□□□□ -0.18
COPS6-208ENST00000474823 BTAF1O14981 1849 aa13.9□□□□□ -0.18
COPS6-208ENST00000474823 NFE2L2Q16236 605 aa13.9□□□□□ -0.18
COPS6-208ENST00000474823 LGR6Q9HBX8 967 aa13.9□□□□□ -0.18
COPS6-208ENST00000474823 TOGARAM1Q9Y4F4 1720 aa13.9□□□□□ -0.18
COPS6-208ENST00000474823 HTATSF1O43719 755 aaKnown RBP13.89□□□□□ -0.19
COPS6-208ENST00000474823 TEFQ10587 303 aa13.89□□□□□ -0.19
COPS6-208ENST00000474823 TXNRD1Q16881 649 aa13.89□□□□□ -0.19
COPS6-208ENST00000474823 NFATC2IPQ8NCF5 419 aa13.89□□□□□ -0.19
COPS6-208ENST00000474823 PNISRQ8TF01 805 aaKnown RBP13.89□□□□□ -0.19
COPS6-208ENST00000474823 SLC52A2Q9HAB3 445 aa13.89□□□□□ -0.19
COPS6-208ENST00000474823 ITGB4P16144 1822 aa13.88□□□□□ -0.19
COPS6-208ENST00000474823 PALLDQ8WX93 1383 aa13.87□□□□□ -0.19
COPS6-208ENST00000474823 RGPD3A6NKT7 1758 aaPredicted RBP13.87□□□□□ -0.19
COPS6-208ENST00000474823 RGPD4Q7Z3J3 1758 aa13.87□□□□□ -0.19
COPS6-208ENST00000474823 SCN11AQ9UI33 1791 aa13.87□□□□□ -0.19
COPS6-208ENST00000474823 HMGB2P26583 209 aaKnown RBP13.87□□□□□ -0.19
COPS6-208ENST00000474823 RIPK4P57078 832 aa13.87□□□□□ -0.19
COPS6-208ENST00000474823 LMOD3Q0VAK6 560 aa13.87□□□□□ -0.19
COPS6-208ENST00000474823 SLC27A3Q5K4L6 730 aa13.87□□□□□ -0.19
COPS6-208ENST00000474823 NBPF14Q5TI25 921 aa13.87□□□□□ -0.19
COPS6-208ENST00000474823 IL17REQ8NFR9 667 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms