RNA–Protein interactions for RNA: ENST00000474742.1

HDAC9-222, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-222ENST00000474742 PTGIRP43119 386 aa2.44□□□□□ -2.02
HDAC9-222ENST00000474742 BAG6P46379 1132 aa2.44□□□□□ -2.02
HDAC9-222ENST00000474742 GAS6Q14393 721 aa2.44□□□□□ -2.02
HDAC9-222ENST00000474742 QPCTQ16769 361 aa2.44□□□□□ -2.02
HDAC9-222ENST00000474742 RTL5Q5HYW3 569 aaPredicted RBP2.44□□□□□ -2.02
HDAC9-222ENST00000474742 INTS6LQ5JSJ4 861 aaKnown RBP2.44□□□□□ -2.02
HDAC9-222ENST00000474742 TRIM22Q8IYM9 498 aa2.44□□□□□ -2.02
HDAC9-222ENST00000474742 Q8N3U1 123 aa2.44□□□□□ -2.02
HDAC9-222ENST00000474742 ZNF784Q8NCA9 323 aaPredicted RBP2.44□□□□□ -2.02
HDAC9-222ENST00000474742 GTPBP3Q969Y2 492 aaKnown RBP2.44□□□□□ -2.02
HDAC9-222ENST00000474742 NLRP3Q96P20 1036 aa2.44□□□□□ -2.02
HDAC9-222ENST00000474742 FAM117AQ9C073 453 aa2.44□□□□□ -2.02
HDAC9-222ENST00000474742 CYLDQ9NQC7 956 aa2.44□□□□□ -2.02
HDAC9-222ENST00000474742 TMPRSS4Q9NRS4 437 aa2.44□□□□□ -2.02
HDAC9-222ENST00000474742 POLR3EQ9NVU0 708 aa2.44□□□□□ -2.02
HDAC9-222ENST00000474742 LIMD1Q9UGP4 676 aa2.44□□□□□ -2.02
HDAC9-222ENST00000474742 MKL2Q9ULH7 1088 aa2.44□□□□□ -2.02
HDAC9-222ENST00000474742 SENP3-EIF4A1A0A087X0R7 540 aa2.43□□□□□ -2.02
HDAC9-222ENST00000474742 PIK3R2O00459 728 aa2.43□□□□□ -2.02
HDAC9-222ENST00000474742 LILRB3O75022 631 aa2.43□□□□□ -2.02
HDAC9-222ENST00000474742 PROCP04070 461 aa2.43□□□□□ -2.02
HDAC9-222ENST00000474742 BRPF1P55201 1214 aaPredicted RBP2.43□□□□□ -2.02
HDAC9-222ENST00000474742 GRIN2CQ14957 1233 aa2.43□□□□□ -2.02
HDAC9-222ENST00000474742 MYSM1Q5VVJ2 828 aa2.43□□□□□ -2.02
HDAC9-222ENST00000474742 ADAM32Q8TC27 787 aa2.43□□□□□ -2.02
HDAC9-222ENST00000474742 ZNF837Q96EG3 531 aaPredicted RBP2.43□□□□□ -2.02
HDAC9-222ENST00000474742 RSPH6AQ9H0K4 717 aa2.43□□□□□ -2.02
HDAC9-222ENST00000474742 KDM4CQ9H3R0 1056 aa2.43□□□□□ -2.02
HDAC9-222ENST00000474742 CUEDC1Q9NWM3 386 aaPredicted RBP2.43□□□□□ -2.02
HDAC9-222ENST00000474742 FKBPLQ9UIM3 349 aa2.43□□□□□ -2.02
HDAC9-222ENST00000474742 PHF24Q9UPV7 400 aa2.43□□□□□ -2.02
HDAC9-222ENST00000474742 SCO2A0A1W2PP80 73 aa2.42□□□□□ -2.02
HDAC9-222ENST00000474742 ATP5J2-PTCD1G3V325 749 aa2.42□□□□□ -2.02
HDAC9-222ENST00000474742 GTF2E1P29083 439 aaPredicted RBP2.42□□□□□ -2.02
HDAC9-222ENST00000474742 MAP2K3P46734 347 aa2.42□□□□□ -2.02
HDAC9-222ENST00000474742 CLK2P49760 499 aaKnown RBP2.42□□□□□ -2.02
HDAC9-222ENST00000474742 CTDSPL2Q05D32 466 aa2.42□□□□□ -2.02
HDAC9-222ENST00000474742 NR6A1Q15406 480 aa2.42□□□□□ -2.02
HDAC9-222ENST00000474742 FOXD4L5Q5VV16 416 aaPredicted RBP2.42□□□□□ -2.02
HDAC9-222ENST00000474742 ALYREFQ86V81 257 aaKnown RBP2.42□□□□□ -2.02
HDAC9-222ENST00000474742 LRRN4Q8WUT4 740 aa2.42□□□□□ -2.02
HDAC9-222ENST00000474742 ACDQ96AP0 544 aa2.42□□□□□ -2.02
HDAC9-222ENST00000474742 PSMG3-AS1Q96PY0 264 aa2.42□□□□□ -2.02
HDAC9-222ENST00000474742 OXCT2Q9BYC2 517 aaPredicted RBP2.42□□□□□ -2.02
HDAC9-222ENST00000474742 NUCKS1Q9H1E3 243 aaKnown RBP2.42□□□□□ -2.02
HDAC9-222ENST00000474742 TIMMDC1Q9NPL8 285 aa2.42□□□□□ -2.02
HDAC9-222ENST00000474742 KRBA1A5PL33 1030 aa2.41□□□□□ -2.02
HDAC9-222ENST00000474742 ERVH48-1M5A8F1 160 aa2.41□□□□□ -2.02
HDAC9-222ENST00000474742 OIP5O43482 229 aa2.41□□□□□ -2.02
HDAC9-222ENST00000474742 CSB-PGBD3P0DP91 1061 aa2.41□□□□□ -2.02
HDAC9-222ENST00000474742 ADD1P35611 737 aaKnown RBP2.41□□□□□ -2.02
HDAC9-222ENST00000474742 RNF144AP50876 292 aaPredicted RBP2.41□□□□□ -2.02
HDAC9-222ENST00000474742 POU4F2Q12837 409 aa2.41□□□□□ -2.02
HDAC9-222ENST00000474742 DBN1Q16643 649 aa2.41□□□□□ -2.02
HDAC9-222ENST00000474742 TUSC1Q2TAM9 212 aa2.41□□□□□ -2.02
HDAC9-222ENST00000474742 PGBD3Q8N328 593 aa2.41□□□□□ -2.02
HDAC9-222ENST00000474742 DYRK1BQ9Y463 629 aa2.41□□□□□ -2.02
HDAC9-222ENST00000474742 GPSM3Q9Y4H4 160 aa2.41□□□□□ -2.02
HDAC9-222ENST00000474742 ZC3H4Q9UPT8 1303 aaKnown RBP2.41□□□□□ -2.02
HDAC9-222ENST00000474742 A0A1W2PRU2 124 aa2.4□□□□□ -2.03
HDAC9-222ENST00000474742 AP1G2O75843 785 aa2.4□□□□□ -2.03
HDAC9-222ENST00000474742 F11P03951 625 aa2.4□□□□□ -2.03
HDAC9-222ENST00000474742 ITGB2P05107 769 aa2.4□□□□□ -2.03
HDAC9-222ENST00000474742 BMP4P12644 408 aa2.4□□□□□ -2.03
HDAC9-222ENST00000474742 SNRPNP63162 240 aaKnown RBP2.4□□□□□ -2.03
HDAC9-222ENST00000474742 ZMYM1Q5SVZ6 1142 aa2.4□□□□□ -2.03
HDAC9-222ENST00000474742 TAS1R3Q7RTX0 852 aa2.4□□□□□ -2.03
HDAC9-222ENST00000474742 PROCA1Q8NCQ7 364 aaPredicted RBP2.4□□□□□ -2.03
HDAC9-222ENST00000474742 EDARADDQ8WWZ3 215 aa2.4□□□□□ -2.03
HDAC9-222ENST00000474742 KRTAP17-1Q9BYP8 105 aa2.4□□□□□ -2.03
HDAC9-222ENST00000474742 SEMA6BQ9H3T3 888 aa2.4□□□□□ -2.03
HDAC9-222ENST00000474742 GPAMQ9HCL2 828 aa2.4□□□□□ -2.03
HDAC9-222ENST00000474742 LRRC4BQ9NT99 713 aa2.4□□□□□ -2.03
HDAC9-222ENST00000474742 NOP53Q9NZM5 478 aaKnown RBP2.4□□□□□ -2.03
HDAC9-222ENST00000474742 GDF2Q9UK05 429 aaPredicted RBP2.4□□□□□ -2.03
HDAC9-222ENST00000474742 PCDHB9Q9Y5E1 797 aa2.4□□□□□ -2.03
HDAC9-222ENST00000474742 LILRA1O75019 489 aa2.39□□□□□ -2.03
HDAC9-222ENST00000474742 GPC1P35052 558 aa2.39□□□□□ -2.03
HDAC9-222ENST00000474742 NEUROD2Q15784 382 aa2.39□□□□□ -2.03
HDAC9-222ENST00000474742 PPP2R2DQ66LE6 453 aa2.39□□□□□ -2.03
HDAC9-222ENST00000474742 NBPF10Q6P3W6 841 aaKnown RBP2.39□□□□□ -2.03
HDAC9-222ENST00000474742 CYP2U1Q7Z449 544 aa2.39□□□□□ -2.03
HDAC9-222ENST00000474742 NBPF11Q86T75 865 aa2.39□□□□□ -2.03
HDAC9-222ENST00000474742 SEPT12Q8IYM1 358 aa2.39□□□□□ -2.03
HDAC9-222ENST00000474742 NBPF15Q8N660 670 aa2.39□□□□□ -2.03
HDAC9-222ENST00000474742 GOLGA6L1Q8N7Z2 621 aa2.39□□□□□ -2.03
HDAC9-222ENST00000474742 IL27Q8NEV9 243 aa2.39□□□□□ -2.03
HDAC9-222ENST00000474742 KRTAP4-8Q9BYQ9 185 aa2.39□□□□□ -2.03
HDAC9-222ENST00000474742 C1QTNF9BB2RNN3 333 aa2.38□□□□□ -2.03
HDAC9-222ENST00000474742 SHISA8B8ZZ34 492 aa2.38□□□□□ -2.03
HDAC9-222ENST00000474742 WASLO00401 505 aaPredicted RBP2.38□□□□□ -2.03
HDAC9-222ENST00000474742 GNB5O14775 395 aa2.38□□□□□ -2.03
HDAC9-222ENST00000474742 PHKA2P46019 1235 aa2.38□□□□□ -2.03
HDAC9-222ENST00000474742 DOC2BQ14184 412 aa2.38□□□□□ -2.03
HDAC9-222ENST00000474742 EFHC2Q5JST6 749 aa2.38□□□□□ -2.03
HDAC9-222ENST00000474742 GNASQ5JWF2 1037 aa2.38□□□□□ -2.03
HDAC9-222ENST00000474742 RNF20Q5VTR2 975 aa2.38□□□□□ -2.03
HDAC9-222ENST00000474742 CC2D2BQ6DHV5 1058 aa2.38□□□□□ -2.03
HDAC9-222ENST00000474742 TMEM214Q6NUQ4 689 aaKnown RBP2.38□□□□□ -2.03
HDAC9-222ENST00000474742 KDF1Q8NAX2 398 aaPredicted RBP2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms