RNA–Protein interactions for RNA: ENST00000474691.1

EPCAM-205, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5

Gene EPCAM, Length 714 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-205ENST00000474691 BTAF1O14981 1849 aa19.32■□□□□ 0.68
EPCAM-205ENST00000474691 AKT1S1Q96B36 256 aa19.32■□□□□ 0.68
EPCAM-205ENST00000474691 CCNL1Q9UK58 526 aaPredicted RBP19.32■□□□□ 0.68
EPCAM-205ENST00000474691 TMF1P82094 1093 aa19.31■□□□□ 0.68
EPCAM-205ENST00000474691 ANKRD36BQ8N2N9 1353 aa19.31■□□□□ 0.68
EPCAM-205ENST00000474691 USP47Q96K76 1375 aa19.31■□□□□ 0.68
EPCAM-205ENST00000474691 KCNQ4P56696 695 aa19.3■□□□□ 0.68
EPCAM-205ENST00000474691 MAP3K5Q99683 1374 aa19.3■□□□□ 0.68
EPCAM-205ENST00000474691 TATP17735 454 aaPredicted RBP19.29■□□□□ 0.68
EPCAM-205ENST00000474691 CGNL1Q0VF96 1302 aa19.28■□□□□ 0.68
EPCAM-205ENST00000474691 PNPLA7Q6ZV29 1317 aa19.28■□□□□ 0.68
EPCAM-205ENST00000474691 FAM208AQ9UK61 1670 aaKnown RBP19.28■□□□□ 0.68
EPCAM-205ENST00000474691 SENP3-EIF4A1A0A087X0R7 540 aa19.28■□□□□ 0.68
EPCAM-205ENST00000474691 FBLN1P23142 703 aa19.28■□□□□ 0.68
EPCAM-205ENST00000474691 RRS1Q15050 365 aaKnown RBP19.28■□□□□ 0.68
EPCAM-205ENST00000474691 CDCA8Q53HL2 280 aa19.28■□□□□ 0.68
EPCAM-205ENST00000474691 GGNBP2Q9H3C7 697 aa19.28■□□□□ 0.68
EPCAM-205ENST00000474691 TESK2Q96S53 571 aa19.27■□□□□ 0.68
EPCAM-205ENST00000474691 RTL1A6NKG5 1358 aa19.27■□□□□ 0.68
EPCAM-205ENST00000474691 PAPPAQ13219 1627 aa19.26■□□□□ 0.67
EPCAM-205ENST00000474691 USHBP1Q8N6Y0 703 aa19.26■□□□□ 0.67
EPCAM-205ENST00000474691 NBPF6Q5VWK0 638 aa19.25■□□□□ 0.67
EPCAM-205ENST00000474691 NBPF4Q96M43 638 aa19.25■□□□□ 0.67
EPCAM-205ENST00000474691 FYB1O15117 783 aa19.23■□□□□ 0.67
EPCAM-205ENST00000474691 GRIN3BO60391 1043 aa19.23■□□□□ 0.67
EPCAM-205ENST00000474691 GIGYF1O75420 1035 aaPredicted RBP19.23■□□□□ 0.67
EPCAM-205ENST00000474691 C1QTNF8P60827 252 aa19.23■□□□□ 0.67
EPCAM-205ENST00000474691 FLAD1Q8NFF5 587 aa19.23■□□□□ 0.67
EPCAM-205ENST00000474691 PCDH11XQ9BZA7 1347 aa19.23■□□□□ 0.67
EPCAM-205ENST00000474691 PCDH11YQ9BZA8 1340 aa19.23■□□□□ 0.67
EPCAM-205ENST00000474691 CHD4Q14839 1912 aa19.22■□□□□ 0.67
EPCAM-205ENST00000474691 MPRIPQ6WCQ1 1025 aa19.21■□□□□ 0.67
EPCAM-205ENST00000474691 MEGF6O75095 1541 aa19.2■□□□□ 0.66
EPCAM-205ENST00000474691 PPM1GO15355 546 aaPredicted RBP19.2■□□□□ 0.66
EPCAM-205ENST00000474691 MSL1Q68DK7 614 aa19.2■□□□□ 0.66
EPCAM-205ENST00000474691 COL23A1Q86Y22 540 aaPredicted RBP19.2■□□□□ 0.66
EPCAM-205ENST00000474691 HSP90AB2PQ58FF8 381 aa19.19■□□□□ 0.66
EPCAM-205ENST00000474691 NLGN2Q8NFZ4 835 aa19.19■□□□□ 0.66
EPCAM-205ENST00000474691 SMARCC1Q92922 1105 aaPredicted RBP19.19■□□□□ 0.66
EPCAM-205ENST00000474691 DOT1LQ8TEK3 1739 aa19.19■□□□□ 0.66
EPCAM-205ENST00000474691 FLT4P35916 1363 aa19.19■□□□□ 0.66
EPCAM-205ENST00000474691 AK7Q96M32 723 aa19.18■□□□□ 0.66
EPCAM-205ENST00000474691 NSD2O96028 1365 aa19.18■□□□□ 0.66
EPCAM-205ENST00000474691 INSRP06213 1382 aa19.17■□□□□ 0.66
EPCAM-205ENST00000474691 PALLDQ8WX93 1383 aa19.17■□□□□ 0.66
EPCAM-205ENST00000474691 QSER1Q2KHR3 1735 aa19.16■□□□□ 0.66
EPCAM-205ENST00000474691 SPG7Q9UQ90 795 aa19.15■□□□□ 0.66
EPCAM-205ENST00000474691 KIF24Q5T7B8 1368 aa19.14■□□□□ 0.65
EPCAM-205ENST00000474691 PHF14O94880 888 aa19.13■□□□□ 0.65
EPCAM-205ENST00000474691 CD2APQ9Y5K6 639 aa19.13■□□□□ 0.65
EPCAM-205ENST00000474691 RGPD2P0DJD1 1756 aa19.13■□□□□ 0.65
EPCAM-205ENST00000474691 LY75O60449 1722 aa19.12■□□□□ 0.65
EPCAM-205ENST00000474691 YBX3P16989 372 aaKnown RBP eCLIP19.11■□□□□ 0.652e-6■■□□□ 11.4
EPCAM-205ENST00000474691 POLR3GLQ9BT43 218 aa19.11■□□□□ 0.65
EPCAM-205ENST00000474691 EMILIN1Q9Y6C2 1016 aa19.11■□□□□ 0.65
EPCAM-205ENST00000474691 NSD3Q9BZ95 1437 aa19.1■□□□□ 0.65
EPCAM-205ENST00000474691 CYP27B1O15528 508 aa19.1■□□□□ 0.65
EPCAM-205ENST00000474691 TMOD3Q9NYL9 352 aa19.09■□□□□ 0.65
EPCAM-205ENST00000474691 GPBP1L1Q9HC44 474 aaPredicted RBP19.08■□□□□ 0.64
EPCAM-205ENST00000474691 TUBGCP6Q96RT7 1819 aa19.07■□□□□ 0.64
EPCAM-205ENST00000474691 PIGBQ92521 554 aa19.07■□□□□ 0.64
EPCAM-205ENST00000474691 SHANK3Q9BYB0 1731 aa19.07■□□□□ 0.64
EPCAM-205ENST00000474691 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.06■□□□□ 0.64
EPCAM-205ENST00000474691 TRIM26Q12899 539 aaPredicted RBP19.06■□□□□ 0.64
EPCAM-205ENST00000474691 IFNL2Q8IZJ0 200 aa19.06■□□□□ 0.64
EPCAM-205ENST00000474691 LOC102724428A0A0B4J2F2 783 aa19.05■□□□□ 0.64
EPCAM-205ENST00000474691 ATP6V1AP38606 617 aa19.05■□□□□ 0.64
EPCAM-205ENST00000474691 SIK1P57059 783 aa19.05■□□□□ 0.64
EPCAM-205ENST00000474691 KIF20BQ96Q89 1820 aa19.04■□□□□ 0.64
EPCAM-205ENST00000474691 SSFA2P28290 1259 aa19.04■□□□□ 0.64
EPCAM-205ENST00000474691 CARD14Q9BXL6 1004 aa19.04■□□□□ 0.64
EPCAM-205ENST00000474691 C5P01031 1676 aa19.04■□□□□ 0.64
EPCAM-205ENST00000474691 WASHC2AQ641Q2 1341 aa19.03■□□□□ 0.64
EPCAM-205ENST00000474691 COL24A1Q17RW2 1714 aa19.03■□□□□ 0.64
EPCAM-205ENST00000474691 GNPATO15228 680 aa19.03■□□□□ 0.64
EPCAM-205ENST00000474691 NKX1-1Q15270 411 aaPredicted RBP19.03■□□□□ 0.64
EPCAM-205ENST00000474691 ZNF526Q8TF50 670 aaPredicted RBP19.03■□□□□ 0.64
EPCAM-205ENST00000474691 EYA1Q99502 592 aa19.03■□□□□ 0.64
EPCAM-205ENST00000474691 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.03■□□□□ 0.64
EPCAM-205ENST00000474691 WWC3Q9ULE0 1092 aa19.03■□□□□ 0.64
EPCAM-205ENST00000474691 TNNT2P45379 298 aaPredicted RBP19.02■□□□□ 0.64
EPCAM-205ENST00000474691 IGSF1Q8N6C5 1336 aa19.01■□□□□ 0.63
EPCAM-205ENST00000474691 ATP10DQ9P241 1426 aa19.01■□□□□ 0.63
EPCAM-205ENST00000474691 LINC00116Q8NCU8 138 aa19■□□□□ 0.63
EPCAM-205ENST00000474691 TIMELESSQ9UNS1 1208 aa19■□□□□ 0.63
EPCAM-205ENST00000474691 C4BP0C0L5 1744 aa19■□□□□ 0.63
EPCAM-205ENST00000474691 UTRNP46939 3433 aa18.99■□□□□ 0.63
EPCAM-205ENST00000474691 PHKG2P15735 406 aa18.99■□□□□ 0.63
EPCAM-205ENST00000474691 RBM42Q9BTD8 480 aaKnown RBP18.99■□□□□ 0.63
EPCAM-205ENST00000474691 ASAP1Q9ULH1 1129 aa18.99■□□□□ 0.63
EPCAM-205ENST00000474691 HSP90AB1P08238 724 aaKnown RBP18.98■□□□□ 0.63
EPCAM-205ENST00000474691 TRAPPC3LQ5T215 181 aa18.98■□□□□ 0.63
EPCAM-205ENST00000474691 SMIM5Q71RC9 77 aa18.98■□□□□ 0.63
EPCAM-205ENST00000474691 POLKQ9UBT6 870 aa18.98■□□□□ 0.63
EPCAM-205ENST00000474691 RTCBQ9Y3I0 505 aaKnown RBP18.98■□□□□ 0.63
EPCAM-205ENST00000474691 PLEKHO1Q53GL0 409 aaPredicted RBP18.96■□□□□ 0.63
EPCAM-205ENST00000474691 TAF1LQ8IZX4 1826 aa18.95■□□□□ 0.62
EPCAM-205ENST00000474691 MMP10P09238 476 aa18.95■□□□□ 0.62
EPCAM-205ENST00000474691 EIF4A2Q14240 407 aaKnown RBP18.95■□□□□ 0.62
EPCAM-205ENST00000474691 ATG3Q9NT62 314 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms