RNA–Protein interactions for RNA: ENST00000474658.6

APTX-219, Transcript of aprataxin, humanhuman

TSL 5

Gene APTX, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-219ENST00000474658 MEGF6O75095 1541 aa12.85□□□□□ -0.35
APTX-219ENST00000474658 PPP2R1AP30153 589 aa12.85□□□□□ -0.35
APTX-219ENST00000474658 IL13P35225 146 aa12.85□□□□□ -0.35
APTX-219ENST00000474658 FAM196AQ6ZSG2 479 aa12.85□□□□□ -0.35
APTX-219ENST00000474658 RAPGEF4Q8WZA2 1011 aa12.85□□□□□ -0.35
APTX-219ENST00000474658 TNS2Q63HR2 1409 aa12.85□□□□□ -0.35
APTX-219ENST00000474658 TATP17735 454 aaPredicted RBP12.84□□□□□ -0.35
APTX-219ENST00000474658 CCDC125Q86Z20 511 aa12.84□□□□□ -0.35
APTX-219ENST00000474658 NCAPD2Q15021 1401 aa12.84□□□□□ -0.35
APTX-219ENST00000474658 PARD3Q8TEW0 1356 aa12.83□□□□□ -0.36
APTX-219ENST00000474658 DIAPH1O60610 1272 aaKnown RBP12.83□□□□□ -0.36
APTX-219ENST00000474658 ZCRB1Q8TBF4 217 aaKnown RBP12.83□□□□□ -0.36
APTX-219ENST00000474658 DDX54Q8TDD1 881 aaKnown RBP12.83□□□□□ -0.36
APTX-219ENST00000474658 IGSF1Q8N6C5 1336 aa12.83□□□□□ -0.36
APTX-219ENST00000474658 OVOS2A0A0G2JMS6 1433 aa12.82□□□□□ -0.36
APTX-219ENST00000474658 TRIM37O94972 964 aa12.82□□□□□ -0.36
APTX-219ENST00000474658 SULT6B1Q6IMI4 303 aa12.81□□□□□ -0.36
APTX-219ENST00000474658 COL3A1P02461 1466 aaPredicted RBP12.8□□□□□ -0.36
APTX-219ENST00000474658 RGPD1P0DJD0 1748 aa12.8□□□□□ -0.36
APTX-219ENST00000474658 SHANK3Q9BYB0 1731 aa12.8□□□□□ -0.36
APTX-219ENST00000474658 SF3B2Q13435 895 aaKnown RBP12.8□□□□□ -0.36
APTX-219ENST00000474658 RALBP1Q15311 655 aa12.8□□□□□ -0.36
APTX-219ENST00000474658 AEBP1Q8IUX7 1158 aa12.8□□□□□ -0.36
APTX-219ENST00000474658 CFAP53Q96M91 514 aa12.8□□□□□ -0.36
APTX-219ENST00000474658 BCL9O00512 1426 aa12.79□□□□□ -0.36
APTX-219ENST00000474658 SBF2Q86WG5 1849 aa12.78□□□□□ -0.36
APTX-219ENST00000474658 U2SURPO15042 1029 aaKnown RBP12.78□□□□□ -0.36
APTX-219ENST00000474658 HMOX1P09601 288 aa12.78□□□□□ -0.36
APTX-219ENST00000474658 PTF1AQ7RTS3 328 aa12.78□□□□□ -0.36
APTX-219ENST00000474658 DEFB132Q7Z7B7 95 aa12.78□□□□□ -0.36
APTX-219ENST00000474658 SPG7Q9UQ90 795 aa12.78□□□□□ -0.36
APTX-219ENST00000474658 PKD1L3Q7Z443 1732 aa12.77□□□□□ -0.36
APTX-219ENST00000474658 TNS1Q9HBL0 1735 aaKnown RBP12.77□□□□□ -0.36
APTX-219ENST00000474658 CYP27B1O15528 508 aa12.77□□□□□ -0.37
APTX-219ENST00000474658 KCNQ2O43526 872 aa12.77□□□□□ -0.37
APTX-219ENST00000474658 ACSBG1Q96GR2 724 aa12.77□□□□□ -0.37
APTX-219ENST00000474658 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.77□□□□□ -0.371e-6■□□□□ 10.8
APTX-219ENST00000474658 PCDH11XQ9BZA7 1347 aa12.77□□□□□ -0.37
APTX-219ENST00000474658 PCDH11YQ9BZA8 1340 aa12.77□□□□□ -0.37
APTX-219ENST00000474658 KDRP35968 1356 aa12.77□□□□□ -0.37
APTX-219ENST00000474658 APBA3O96018 575 aa12.76□□□□□ -0.37
APTX-219ENST00000474658 BAG6P46379 1132 aa12.76□□□□□ -0.37
APTX-219ENST00000474658 BCL11BQ9C0K0 894 aaPredicted RBP12.76□□□□□ -0.37
APTX-219ENST00000474658 PRKRIP1Q9H875 184 aaPredicted RBP12.76□□□□□ -0.37
APTX-219ENST00000474658 EN1Q05925 392 aaPredicted RBP12.75□□□□□ -0.37
APTX-219ENST00000474658 PLEKHO1Q53GL0 409 aaPredicted RBP12.75□□□□□ -0.37
APTX-219ENST00000474658 MYBBP1AQ9BQG0 1328 aaKnown RBP12.75□□□□□ -0.37
APTX-219ENST00000474658 NUDCQ9Y266 331 aa12.75□□□□□ -0.37
APTX-219ENST00000474658 PHKG2P15735 406 aa12.74□□□□□ -0.37
APTX-219ENST00000474658 AMOTQ4VCS5 1084 aa12.74□□□□□ -0.37
APTX-219ENST00000474658 IFNL2Q8IZJ0 200 aa12.74□□□□□ -0.37
APTX-219ENST00000474658 NHSQ6T4R5 1651 aa12.73□□□□□ -0.37
APTX-219ENST00000474658 PLEKHG2Q9H7P9 1386 aa12.73□□□□□ -0.37
APTX-219ENST00000474658 U2AF1L5P0DN76 240 aaPredicted RBP12.73□□□□□ -0.37
APTX-219ENST00000474658 PRIM1P49642 420 aaKnown RBP12.73□□□□□ -0.37
APTX-219ENST00000474658 U2AF1Q01081 240 aaKnown RBP eCLIP12.73□□□□□ -0.372e-8■■■■■ 37
APTX-219ENST00000474658 NKX1-1Q15270 411 aaPredicted RBP12.73□□□□□ -0.37
APTX-219ENST00000474658 EZH2Q15910 746 aaKnown RBP12.73□□□□□ -0.37
APTX-219ENST00000474658 DOT1LQ8TEK3 1739 aa12.72□□□□□ -0.37
APTX-219ENST00000474658 ZNF530Q6P9A1 599 aaPredicted RBP12.72□□□□□ -0.37
APTX-219ENST00000474658 SYTL4Q96C24 671 aaPredicted RBP12.72□□□□□ -0.37
APTX-219ENST00000474658 CAMKK2Q96RR4 588 aa12.72□□□□□ -0.37
APTX-219ENST00000474658 PLSCR1O15162 318 aa12.71□□□□□ -0.37
APTX-219ENST00000474658 RSPH6AQ9H0K4 717 aa12.71□□□□□ -0.37
APTX-219ENST00000474658 PRKAR2BP31323 418 aa12.7□□□□□ -0.38
APTX-219ENST00000474658 MTHFSDQ2M296 383 aaKnown RBP12.7□□□□□ -0.38
APTX-219ENST00000474658 KAT6BQ8WYB5 2073 aa12.69□□□□□ -0.38
APTX-219ENST00000474658 BTAF1O14981 1849 aa12.69□□□□□ -0.38
APTX-219ENST00000474658 TOGARAM1Q9Y4F4 1720 aa12.69□□□□□ -0.38
APTX-219ENST00000474658 FCHSD2O94868 740 aa12.69□□□□□ -0.38
APTX-219ENST00000474658 C1orf141Q5JVX7 400 aa12.69□□□□□ -0.38
APTX-219ENST00000474658 ANP32CO43423 234 aa12.68□□□□□ -0.38
APTX-219ENST00000474658 HSP90AB1P08238 724 aaKnown RBP12.68□□□□□ -0.38
APTX-219ENST00000474658 AKAP4Q5JQC9 854 aa12.68□□□□□ -0.38
APTX-219ENST00000474658 MPRIPQ6WCQ1 1025 aa12.68□□□□□ -0.38
APTX-219ENST00000474658 DCAF5Q96JK2 942 aa12.68□□□□□ -0.38
APTX-219ENST00000474658 PHACTR3Q96KR7 559 aa12.68□□□□□ -0.38
APTX-219ENST00000474658 PROM2Q8N271 834 aa12.67□□□□□ -0.38
APTX-219ENST00000474658 ITGB4P16144 1822 aa12.67□□□□□ -0.38
APTX-219ENST00000474658 KDM6AO15550 1401 aaPredicted RBP12.66□□□□□ -0.38
APTX-219ENST00000474658 TXNRD1Q16881 649 aa12.66□□□□□ -0.38
APTX-219ENST00000474658 PIGBQ92521 554 aa12.66□□□□□ -0.38
APTX-219ENST00000474658 RREB1Q92766 1687 aa12.66□□□□□ -0.38
APTX-219ENST00000474658 RGPD3A6NKT7 1758 aaPredicted RBP12.66□□□□□ -0.38
APTX-219ENST00000474658 RGPD4Q7Z3J3 1758 aa12.66□□□□□ -0.38
APTX-219ENST00000474658 ERVV-2B6SEH9 535 aa12.65□□□□□ -0.38
APTX-219ENST00000474658 GAS2L2Q8NHY3 880 aa12.65□□□□□ -0.38
APTX-219ENST00000474658 LGR6Q9HBX8 967 aa12.65□□□□□ -0.38
APTX-219ENST00000474658 TMOD3Q9NYL9 352 aa12.65□□□□□ -0.38
APTX-219ENST00000474658 CABP4P57796 275 aa12.64□□□□□ -0.39
APTX-219ENST00000474658 CCDC184Q52MB2 194 aa12.64□□□□□ -0.39
APTX-219ENST00000474658 PLEKHF1Q96S99 279 aa12.64□□□□□ -0.39
APTX-219ENST00000474658 NUP188Q5SRE5 1749 aa12.64□□□□□ -0.39
APTX-219ENST00000474658 GNAT3A8MTJ3 354 aa12.63□□□□□ -0.39
APTX-219ENST00000474658 RNMTO43148 476 aaKnown RBP12.63□□□□□ -0.39
APTX-219ENST00000474658 WDR43Q15061 677 aaKnown RBP eCLIP12.63□□□□□ -0.39
APTX-219ENST00000474658 PNNQ9H307 717 aaKnown RBP12.63□□□□□ -0.39
APTX-219ENST00000474658 SCN11AQ9UI33 1791 aa12.63□□□□□ -0.39
APTX-219ENST00000474658 MAP3K5Q99683 1374 aa12.62□□□□□ -0.39
APTX-219ENST00000474658 NEFMP07197 916 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms