RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 KRT28Q7Z3Y7 464 aa27.64■■■□□ 2.02
CCM2-206ENST00000474617 FOXO3O43524 673 aa27.63■■■□□ 2.01
CCM2-206ENST00000474617 PCDHB15Q9Y5E8 787 aa27.63■■■□□ 2.01
CCM2-206ENST00000474617 MAP3K5Q99683 1374 aa27.63■■■□□ 2.01
CCM2-206ENST00000474617 NCAPD2Q15021 1401 aa27.63■■■□□ 2.01
CCM2-206ENST00000474617 ABCC4O15439 1325 aa27.62■■■□□ 2.01
CCM2-206ENST00000474617 GCP02774 474 aa27.62■■■□□ 2.01
CCM2-206ENST00000474617 DCTN1Q14203 1278 aa27.62■■■□□ 2.01
CCM2-206ENST00000474617 FAM161AQ3B820 660 aa27.62■■■□□ 2.01
CCM2-206ENST00000474617 ARHGEF25Q86VW2 580 aa27.62■■■□□ 2.01
CCM2-206ENST00000474617 TMEM57Q8N5G2 664 aa27.62■■■□□ 2.01
CCM2-206ENST00000474617 TSPYL6Q8N831 410 aa27.62■■■□□ 2.01
CCM2-206ENST00000474617 C8orf58Q8NAV2 365 aa27.62■■■□□ 2.01
CCM2-206ENST00000474617 ZBTB40Q9NUA8 1239 aa27.62■■■□□ 2.01
CCM2-206ENST00000474617 TNNQ9UQP3 1299 aa27.62■■■□□ 2.01
CCM2-206ENST00000474617 PLEKHG2Q9H7P9 1386 aa27.61■■■□□ 2.01
CCM2-206ENST00000474617 ALS2Q96Q42 1657 aa27.61■■■□□ 2.01
CCM2-206ENST00000474617 MCM10Q7L590 875 aa27.61■■■□□ 2.01
CCM2-206ENST00000474617 CHMP4AQ9BY43 222 aa27.61■■■□□ 2.01
CCM2-206ENST00000474617 ABCC6O95255 1503 aa27.6■■■□□ 2.01
CCM2-206ENST00000474617 MSH6P52701 1360 aa27.6■■■□□ 2.01
CCM2-206ENST00000474617 PTPRCP08575 1304 aa27.59■■■□□ 2.01
CCM2-206ENST00000474617 STRCP1A6NGW2 1772 aa27.58■■■□□ 2.01
CCM2-206ENST00000474617 NPHP3Q7Z494 1330 aa27.58■■■□□ 2.01
CCM2-206ENST00000474617 LMTK3Q96Q04 1460 aa27.58■■■□□ 2.01
CCM2-206ENST00000474617 CAMTA1Q9Y6Y1 1673 aa27.56■■■□□ 2
CCM2-206ENST00000474617 AMOTQ4VCS5 1084 aa27.56■■■□□ 2
CCM2-206ENST00000474617 TSPYL4Q9UJ04 414 aa27.56■■■□□ 2
CCM2-206ENST00000474617 OVOS2A0A0G2JMS6 1433 aa27.54■■■□□ 2
CCM2-206ENST00000474617 ELL2O00472 640 aaPredicted RBP27.51■■□□□ 1.99
CCM2-206ENST00000474617 PLEKHO1Q53GL0 409 aaPredicted RBP27.51■■□□□ 1.99
CCM2-206ENST00000474617 SMC5Q8IY18 1101 aa27.51■■□□□ 1.99
CCM2-206ENST00000474617 LTV1Q96GA3 475 aaPredicted RBP27.51■■□□□ 1.99
CCM2-206ENST00000474617 CEMIPQ8WUJ3 1361 aa27.5■■□□□ 1.99
CCM2-206ENST00000474617 ZBTB7BO15156 539 aaPredicted RBP27.5■■□□□ 1.99
CCM2-206ENST00000474617 TAF7Q15545 349 aaPredicted RBP27.5■■□□□ 1.99
CCM2-206ENST00000474617 IPO9Q96P70 1041 aaKnown RBP27.5■■□□□ 1.99
CCM2-206ENST00000474617 RGS3P49796 1198 aa27.49■■□□□ 1.99
CCM2-206ENST00000474617 INTS3Q68E01 1043 aaKnown RBP27.49■■□□□ 1.99
CCM2-206ENST00000474617 LMO7Q8WWI1 1683 aa27.49■■□□□ 1.99
CCM2-206ENST00000474617 TNS3Q68CZ2 1445 aa27.48■■□□□ 1.99
CCM2-206ENST00000474617 NBPF6Q5VWK0 638 aa27.48■■□□□ 1.99
CCM2-206ENST00000474617 NBPF4Q96M43 638 aa27.48■■□□□ 1.99
CCM2-206ENST00000474617 MED1Q15648 1581 aaPredicted RBP27.48■■□□□ 1.99
CCM2-206ENST00000474617 CACNA1FO60840 1977 aa27.48■■□□□ 1.99
CCM2-206ENST00000474617 VIRMAQ69YN4 1812 aaKnown RBP27.47■■□□□ 1.99
CCM2-206ENST00000474617 AKAP4Q5JQC9 854 aa27.46■■□□□ 1.99
CCM2-206ENST00000474617 PDZRN3Q9UPQ7 1066 aa27.46■■□□□ 1.99
CCM2-206ENST00000474617 GCC1Q96CN9 775 aa27.46■■□□□ 1.99
CCM2-206ENST00000474617 FAM208AQ9UK61 1670 aaKnown RBP27.45■■□□□ 1.98
CCM2-206ENST00000474617 HOXB7P09629 217 aa27.45■■□□□ 1.98
CCM2-206ENST00000474617 C8orf34Q49A92 452 aa27.45■■□□□ 1.98
CCM2-206ENST00000474617 LMOD2Q6P5Q4 547 aa27.45■■□□□ 1.98
CCM2-206ENST00000474617 ANKRD24Q8TF21 1146 aa27.45■■□□□ 1.98
CCM2-206ENST00000474617 DDRGK1Q96HY6 314 aa27.45■■□□□ 1.98
CCM2-206ENST00000474617 STRCQ7RTU9 1775 aa27.45■■□□□ 1.98
CCM2-206ENST00000474617 CCDC30Q5VVM6 783 aa27.44■■□□□ 1.98
CCM2-206ENST00000474617 STK31Q9BXU1 1019 aa27.44■■□□□ 1.98
CCM2-206ENST00000474617 PXDNQ92626 1479 aa27.43■■□□□ 1.98
CCM2-206ENST00000474617 IL17REQ8NFR9 667 aa27.43■■□□□ 1.98
CCM2-206ENST00000474617 XPCQ01831 940 aaPredicted RBP27.42■■□□□ 1.98
CCM2-206ENST00000474617 ERICH6Q7L0X2 663 aa27.42■■□□□ 1.98
CCM2-206ENST00000474617 HSPA2P54652 639 aa27.41■■□□□ 1.98
CCM2-206ENST00000474617 RGS12O14924 1447 aa27.41■■□□□ 1.98
CCM2-206ENST00000474617 CPDO75976 1380 aa27.41■■□□□ 1.98
CCM2-206ENST00000474617 XIRP1Q702N8 1843 aaKnown RBP27.4■■□□□ 1.98
CCM2-206ENST00000474617 KDM4FA0A1W2PPD8 638 aa27.4■■□□□ 1.98
CCM2-206ENST00000474617 ERBB3P21860 1342 aa27.39■■□□□ 1.98
CCM2-206ENST00000474617 SPATA31A3Q5VYP0 1347 aa27.39■■□□□ 1.98
CCM2-206ENST00000474617 CCT4P50991 539 aaKnown RBP27.39■■□□□ 1.98
CCM2-206ENST00000474617 SKAP1Q86WV1 359 aa27.39■■□□□ 1.98
CCM2-206ENST00000474617 SLC4A2P04920 1241 aa27.38■■□□□ 1.97
CCM2-206ENST00000474617 C1orf141Q5JVX7 400 aa27.38■■□□□ 1.97
CCM2-206ENST00000474617 MSH5O43196 834 aa27.37■■□□□ 1.97
CCM2-206ENST00000474617 USHBP1Q8N6Y0 703 aa27.37■■□□□ 1.97
CCM2-206ENST00000474617 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.37■■□□□ 1.97
CCM2-206ENST00000474617 ZBTB7CA1YPR0 619 aa27.36■■□□□ 1.97
CCM2-206ENST00000474617 NUCB1Q02818 461 aa27.36■■□□□ 1.97
CCM2-206ENST00000474617 ZNF530Q6P9A1 599 aaPredicted RBP27.36■■□□□ 1.97
CCM2-206ENST00000474617 NOP58Q9Y2X3 529 aaKnown RBP27.36■■□□□ 1.97
CCM2-206ENST00000474617 RGPD2P0DJD1 1756 aa27.36■■□□□ 1.97
CCM2-206ENST00000474617 KRT24Q2M2I5 525 aa27.35■■□□□ 1.97
CCM2-206ENST00000474617 RPAP2Q8IXW5 612 aaPredicted RBP27.35■■□□□ 1.97
CCM2-206ENST00000474617 ZBTB47Q9UFB7 747 aaPredicted RBP27.35■■□□□ 1.97
CCM2-206ENST00000474617 PXDNLA1KZ92 1463 aa27.35■■□□□ 1.97
CCM2-206ENST00000474617 CRYBG1Q9Y4K1 1723 aa27.34■■□□□ 1.97
CCM2-206ENST00000474617 KDM3BQ7LBC6 1761 aa27.34■■□□□ 1.97
CCM2-206ENST00000474617 TEFQ10587 303 aa27.34■■□□□ 1.97
CCM2-206ENST00000474617 ADAMTS7Q9UKP4 1686 aa27.33■■□□□ 1.97
CCM2-206ENST00000474617 COL18A1P39060 1754 aa27.33■■□□□ 1.97
CCM2-206ENST00000474617 MIS18AQ9NYP9 233 aa27.33■■□□□ 1.97
CCM2-206ENST00000474617 LRRC59Q96AG4 307 aaKnown RBP27.32■■□□□ 1.96
CCM2-206ENST00000474617 ANP32EQ9BTT0 268 aa27.32■■□□□ 1.96
CCM2-206ENST00000474617 BRINP3Q76B58 766 aa27.3■■□□□ 1.96
CCM2-206ENST00000474617 RAPGEF4Q8WZA2 1011 aa27.3■■□□□ 1.96
CCM2-206ENST00000474617 AXIN2Q9Y2T1 843 aa27.3■■□□□ 1.96
CCM2-206ENST00000474617 N4BP2Q86UW6 1770 aaPredicted RBP27.3■■□□□ 1.96
CCM2-206ENST00000474617 CHD1LQ86WJ1 897 aa27.29■■□□□ 1.96
CCM2-206ENST00000474617 UPF2Q9HAU5 1272 aaKnown RBP27.29■■□□□ 1.96
CCM2-206ENST00000474617 SOS2Q07890 1332 aaPredicted RBP27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms