RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 SMC4Q9NTJ3 1288 aa25.49■■□□□ 1.67
SSR1-204ENST00000474597 CPDO75976 1380 aa25.49■■□□□ 1.67
SSR1-204ENST00000474597 KIAA0232Q92628 1395 aa25.49■■□□□ 1.67
SSR1-204ENST00000474597 PDE3AQ14432 1141 aa25.48■■□□□ 1.67
SSR1-204ENST00000474597 ZNF428Q96B54 188 aa25.48■■□□□ 1.67
SSR1-204ENST00000474597 MAP3K5Q99683 1374 aa25.48■■□□□ 1.67
SSR1-204ENST00000474597 NCAPD2Q15021 1401 aa25.47■■□□□ 1.67
SSR1-204ENST00000474597 CHRNA2Q15822 529 aa25.47■■□□□ 1.67
SSR1-204ENST00000474597 ROBO1Q9Y6N7 1651 aa25.46■■□□□ 1.67
SSR1-204ENST00000474597 CSB-PGBD3P0DP91 1061 aa25.46■■□□□ 1.67
SSR1-204ENST00000474597 PLEKHO1Q53GL0 409 aaPredicted RBP25.46■■□□□ 1.67
SSR1-204ENST00000474597 FAM208AQ9UK61 1670 aaKnown RBP25.46■■□□□ 1.67
SSR1-204ENST00000474597 CRB1P82279 1406 aa25.45■■□□□ 1.66
SSR1-204ENST00000474597 CHL1O00533 1208 aa25.44■■□□□ 1.66
SSR1-204ENST00000474597 ALDH1L2Q3SY69 923 aa25.44■■□□□ 1.66
SSR1-204ENST00000474597 SSH1Q8WYL5 1049 aa25.44■■□□□ 1.66
SSR1-204ENST00000474597 AMOTQ4VCS5 1084 aa25.44■■□□□ 1.66
SSR1-204ENST00000474597 NLRP2Q9NX02 1062 aa25.44■■□□□ 1.66
SSR1-204ENST00000474597 ABCA3Q99758 1704 aa25.44■■□□□ 1.66
SSR1-204ENST00000474597 PRDM11Q9NQV5 511 aa25.43■■□□□ 1.66
SSR1-204ENST00000474597 TWISTNBQ3B726 338 aaPredicted RBP25.42■■□□□ 1.66
SSR1-204ENST00000474597 ZKSCAN2Q63HK3 967 aa25.42■■□□□ 1.66
SSR1-204ENST00000474597 LMO7Q8WWI1 1683 aa25.42■■□□□ 1.66
SSR1-204ENST00000474597 VAMP4O75379 141 aa25.42■■□□□ 1.66
SSR1-204ENST00000474597 LRRC37A3O60309 1634 aa25.41■■□□□ 1.66
SSR1-204ENST00000474597 KIF16BQ96L93 1317 aa25.41■■□□□ 1.66
SSR1-204ENST00000474597 ELL2O00472 640 aaPredicted RBP25.4■■□□□ 1.66
SSR1-204ENST00000474597 MS4A1P11836 297 aa25.4■■□□□ 1.66
SSR1-204ENST00000474597 ZNF530Q6P9A1 599 aaPredicted RBP25.4■■□□□ 1.66
SSR1-204ENST00000474597 TSPYL6Q8N831 410 aa25.4■■□□□ 1.66
SSR1-204ENST00000474597 TSPYL4Q9UJ04 414 aa25.4■■□□□ 1.66
SSR1-204ENST00000474597 C8orf58Q8NAV2 365 aa25.39■■□□□ 1.65
SSR1-204ENST00000474597 RAPGEF4Q8WZA2 1011 aa25.39■■□□□ 1.65
SSR1-204ENST00000474597 AKAP4Q5JQC9 854 aa25.38■■□□□ 1.65
SSR1-204ENST00000474597 C1orf141Q5JVX7 400 aa25.38■■□□□ 1.65
SSR1-204ENST00000474597 PANK1Q8TE04 598 aa25.38■■□□□ 1.65
SSR1-204ENST00000474597 AHDC1Q5TGY3 1603 aaPredicted RBP25.38■■□□□ 1.65
SSR1-204ENST00000474597 IPO8O15397 1037 aaKnown RBP25.37■■□□□ 1.65
SSR1-204ENST00000474597 FTSJ3Q8IY81 847 aaKnown RBP25.37■■□□□ 1.65
SSR1-204ENST00000474597 IL17REQ8NFR9 667 aa25.37■■□□□ 1.65
SSR1-204ENST00000474597 COG6Q9Y2V7 657 aa25.36■■□□□ 1.65
SSR1-204ENST00000474597 TATP17735 454 aaPredicted RBP25.35■■□□□ 1.65
SSR1-204ENST00000474597 MIS18AQ9NYP9 233 aa25.35■■□□□ 1.65
SSR1-204ENST00000474597 NOB1Q9ULX3 412 aaKnown RBP25.35■■□□□ 1.65
SSR1-204ENST00000474597 DZIP1LQ8IYY4 767 aaKnown RBP25.35■■□□□ 1.65
SSR1-204ENST00000474597 CLUAP1Q96AJ1 413 aa25.35■■□□□ 1.65
SSR1-204ENST00000474597 BRPF1P55201 1214 aaPredicted RBP25.34■■□□□ 1.65
SSR1-204ENST00000474597 TAF7Q15545 349 aaPredicted RBP25.34■■□□□ 1.65
SSR1-204ENST00000474597 ATF7IPQ6VMQ6 1270 aa25.33■■□□□ 1.65
SSR1-204ENST00000474597 BABAM1Q9NWV8 329 aa25.33■■□□□ 1.65
SSR1-204ENST00000474597 VIRMAQ69YN4 1812 aaKnown RBP25.33■■□□□ 1.64
SSR1-204ENST00000474597 TNNQ9UQP3 1299 aa25.33■■□□□ 1.64
SSR1-204ENST00000474597 TOM1O60784 492 aa25.32■■□□□ 1.64
SSR1-204ENST00000474597 RLBP1P12271 317 aa25.31■■□□□ 1.64
SSR1-204ENST00000474597 MRPL50Q8N5N7 158 aaKnown RBP25.31■■□□□ 1.64
SSR1-204ENST00000474597 CEMIPQ8WUJ3 1361 aa25.31■■□□□ 1.64
SSR1-204ENST00000474597 TRIM27P14373 513 aa25.3■■□□□ 1.64
SSR1-204ENST00000474597 WDR17Q8IZU2 1322 aa25.3■■□□□ 1.64
SSR1-204ENST00000474597 KRT24Q2M2I5 525 aa25.3■■□□□ 1.64
SSR1-204ENST00000474597 SPG7Q9UQ90 795 aa25.3■■□□□ 1.64
SSR1-204ENST00000474597 PHLPP1O60346 1717 aa25.29■■□□□ 1.64
SSR1-204ENST00000474597 TEFQ10587 303 aa25.29■■□□□ 1.64
SSR1-204ENST00000474597 AAMPQ13685 434 aa25.29■■□□□ 1.64
SSR1-204ENST00000474597 TOM1L2Q6ZVM7 507 aa25.29■■□□□ 1.64
SSR1-204ENST00000474597 LGR6Q9HBX8 967 aa25.29■■□□□ 1.64
SSR1-204ENST00000474597 COL5A2P05997 1499 aaPredicted RBP25.29■■□□□ 1.64
SSR1-204ENST00000474597 PLEKHG2Q9H7P9 1386 aa25.28■■□□□ 1.64
SSR1-204ENST00000474597 TCERG1O14776 1098 aaKnown RBP25.28■■□□□ 1.64
SSR1-204ENST00000474597 EVA1CP58658 441 aa25.28■■□□□ 1.64
SSR1-204ENST00000474597 MVPQ14764 893 aaKnown RBP25.28■■□□□ 1.64
SSR1-204ENST00000474597 MPRIPQ6WCQ1 1025 aa25.28■■□□□ 1.64
SSR1-204ENST00000474597 RNMTO43148 476 aaKnown RBP25.27■■□□□ 1.64
SSR1-204ENST00000474597 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.27■■□□□ 1.645e-11■■■□□ 15
SSR1-204ENST00000474597 MEGF6O75095 1541 aa25.27■■□□□ 1.64
SSR1-204ENST00000474597 COL22A1Q8NFW1 1626 aaPredicted RBP25.26■■□□□ 1.63
SSR1-204ENST00000474597 AEBP2Q6ZN18 517 aaPredicted RBP25.26■■□□□ 1.63
SSR1-204ENST00000474597 ARHGAP45Q92619 1136 aa25.26■■□□□ 1.63
SSR1-204ENST00000474597 OVOS2A0A0G2JMS6 1433 aa25.26■■□□□ 1.63
SSR1-204ENST00000474597 STRN4Q9NRL3 753 aa25.26■■□□□ 1.63
SSR1-204ENST00000474597 PIP4K2BP78356 416 aa25.25■■□□□ 1.63
SSR1-204ENST00000474597 PARP4Q9UKK3 1724 aaKnown RBP25.24■■□□□ 1.63
SSR1-204ENST00000474597 ITPRIPQ8IWB1 547 aa25.23■■□□□ 1.63
SSR1-204ENST00000474597 PKD1L3Q7Z443 1732 aa25.23■■□□□ 1.63
SSR1-204ENST00000474597 SOS1Q07889 1333 aaPredicted RBP25.22■■□□□ 1.63
SSR1-204ENST00000474597 DDX19BQ9UMR2 479 aa25.22■■□□□ 1.63
SSR1-204ENST00000474597 IFNL2Q8IZJ0 200 aa25.21■■□□□ 1.63
SSR1-204ENST00000474597 API5Q9BZZ5 524 aaKnown RBP25.21■■□□□ 1.63
SSR1-204ENST00000474597 COL14A1Q05707 1796 aaKnown RBP25.21■■□□□ 1.63
SSR1-204ENST00000474597 KDM3BQ7LBC6 1761 aa25.21■■□□□ 1.63
SSR1-204ENST00000474597 COL16A1Q07092 1604 aaPredicted RBP25.21■■□□□ 1.63
SSR1-204ENST00000474597 BTBD11A6QL63 1104 aa25.21■■□□□ 1.63
SSR1-204ENST00000474597 CENPQQ7L2Z9 268 aaPredicted RBP25.21■■□□□ 1.63
SSR1-204ENST00000474597 CARD10Q9BWT7 1032 aa25.21■■□□□ 1.63
SSR1-204ENST00000474597 PHKG2P15735 406 aa25.2■■□□□ 1.62
SSR1-204ENST00000474597 TMEM57Q8N5G2 664 aa25.2■■□□□ 1.62
SSR1-204ENST00000474597 SCN11AQ9UI33 1791 aa25.19■■□□□ 1.62
SSR1-204ENST00000474597 ADAMTS7Q9UKP4 1686 aa25.19■■□□□ 1.62
SSR1-204ENST00000474597 UBAP1LF5GYI3 381 aa25.19■■□□□ 1.62
SSR1-204ENST00000474597 LARP1Q6PKG0 1096 aaKnown RBP25.19■■□□□ 1.62
SSR1-204ENST00000474597 STK31Q9BXU1 1019 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms