RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 HAP1P54257 671 aaPredicted RBP10□□□□□ -0.81
CCDC93-208ENST00000474546 MLLT1Q03111 559 aaPredicted RBP10□□□□□ -0.81
CCDC93-208ENST00000474546 VPS72Q15906 364 aa10□□□□□ -0.81
CCDC93-208ENST00000474546 CSPP1Q1MSJ5 1256 aa10□□□□□ -0.81
CCDC93-208ENST00000474546 MORC1Q86VD1 984 aa10□□□□□ -0.81
CCDC93-208ENST00000474546 PDZRN3Q9UPQ7 1066 aa10□□□□□ -0.81
CCDC93-208ENST00000474546 COG6Q9Y2V7 657 aa10□□□□□ -0.81
CCDC93-208ENST00000474546 SOS2Q07890 1332 aaPredicted RBP10□□□□□ -0.81
CCDC93-208ENST00000474546 CASZ1Q86V15 1759 aa9.99□□□□□ -0.81
CCDC93-208ENST00000474546 APBA3O96018 575 aa9.99□□□□□ -0.81
CCDC93-208ENST00000474546 PTGER2P43116 358 aa9.99□□□□□ -0.81
CCDC93-208ENST00000474546 ALDH1L2Q3SY69 923 aa9.99□□□□□ -0.81
CCDC93-208ENST00000474546 GCC1Q96CN9 775 aa9.99□□□□□ -0.81
CCDC93-208ENST00000474546 MAP3K5Q99683 1374 aa9.99□□□□□ -0.81
CCDC93-208ENST00000474546 EFCAB6Q5THR3 1501 aa9.98□□□□□ -0.81
CCDC93-208ENST00000474546 PIK3C2BO00750 1634 aa9.98□□□□□ -0.81
CCDC93-208ENST00000474546 A0A0G2JS52 829 aa9.98□□□□□ -0.81
CCDC93-208ENST00000474546 BRPF1P55201 1214 aaPredicted RBP9.98□□□□□ -0.81
CCDC93-208ENST00000474546 HSP90AB1P08238 724 aaKnown RBP9.97□□□□□ -0.81
CCDC93-208ENST00000474546 NUCB2P80303 420 aa9.97□□□□□ -0.81
CCDC93-208ENST00000474546 BMP2KLQ5H9B9 411 aa9.97□□□□□ -0.81
CCDC93-208ENST00000474546 RRAGDQ9NQL2 400 aaPredicted RBP9.97□□□□□ -0.81
CCDC93-208ENST00000474546 MSNP26038 577 aaKnown RBP9.96□□□□□ -0.82
CCDC93-208ENST00000474546 RAB3GAP1Q15042 981 aa9.96□□□□□ -0.82
CCDC93-208ENST00000474546 ZSCAN30Q86W11 494 aa9.96□□□□□ -0.82
CCDC93-208ENST00000474546 TCP11L2Q8N4U5 519 aa9.96□□□□□ -0.82
CCDC93-208ENST00000474546 PKNOX2Q96KN3 472 aa9.96□□□□□ -0.82
CCDC93-208ENST00000474546 PPP1R9BQ96SB3 815 aa9.96□□□□□ -0.82
CCDC93-208ENST00000474546 CWC22Q9HCG8 908 aaKnown RBP9.96□□□□□ -0.82
CCDC93-208ENST00000474546 KIF24Q5T7B8 1368 aa9.96□□□□□ -0.82
CCDC93-208ENST00000474546 ANKRD36BQ8N2N9 1353 aa9.96□□□□□ -0.82
CCDC93-208ENST00000474546 TMEM131LA2VDJ0 1609 aa9.96□□□□□ -0.82
CCDC93-208ENST00000474546 DDIT3P35638 169 aa9.95□□□□□ -0.82
CCDC93-208ENST00000474546 CCDC146Q8IYE0 955 aa9.95□□□□□ -0.82
CCDC93-208ENST00000474546 PANK1Q8TE04 598 aa9.95□□□□□ -0.82
CCDC93-208ENST00000474546 ARHGAP45Q92619 1136 aa9.95□□□□□ -0.82
CCDC93-208ENST00000474546 CCDC9Q9Y3X0 531 aaKnown RBP9.95□□□□□ -0.82
CCDC93-208ENST00000474546 TBX22Q9Y458 520 aa9.95□□□□□ -0.82
CCDC93-208ENST00000474546 NSD3Q9BZ95 1437 aa9.95□□□□□ -0.82
CCDC93-208ENST00000474546 ADGRB3O60242 1522 aa9.95□□□□□ -0.82
CCDC93-208ENST00000474546 QRICH2Q9H0J4 1663 aa9.94□□□□□ -0.82
CCDC93-208ENST00000474546 PPIP5K1Q6PFW1 1433 aa9.94□□□□□ -0.82
CCDC93-208ENST00000474546 PIK3R4Q99570 1358 aa9.94□□□□□ -0.82
CCDC93-208ENST00000474546 KLHL40Q2TBA0 621 aa9.94□□□□□ -0.82
CCDC93-208ENST00000474546 CASC1Q6TDU7 716 aa9.94□□□□□ -0.82
CCDC93-208ENST00000474546 ATF7IPQ6VMQ6 1270 aa9.94□□□□□ -0.82
CCDC93-208ENST00000474546 NWD2Q9ULI1 1742 aa9.93□□□□□ -0.82
CCDC93-208ENST00000474546 ZFYVE9O95405 1425 aa9.93□□□□□ -0.82
CCDC93-208ENST00000474546 EVC2Q86UK5 1308 aa9.93□□□□□ -0.82
CCDC93-208ENST00000474546 GRIN3BO60391 1043 aa9.93□□□□□ -0.82
CCDC93-208ENST00000474546 TRIM37O94972 964 aa9.93□□□□□ -0.82
CCDC93-208ENST00000474546 PCDHB15Q9Y5E8 787 aa9.93□□□□□ -0.82
CCDC93-208ENST00000474546 ANKRD26Q9UPS8 1709 aa9.93□□□□□ -0.82
CCDC93-208ENST00000474546 K7ELQ4 463 aaPredicted RBP9.92□□□□□ -0.82
CCDC93-208ENST00000474546 ZBTB7AO95365 584 aa9.92□□□□□ -0.82
CCDC93-208ENST00000474546 SEC24BO95487 1268 aa9.92□□□□□ -0.82
CCDC93-208ENST00000474546 HSPA1AP0DMV8 641 aaKnown RBP9.92□□□□□ -0.82
CCDC93-208ENST00000474546 HSPA1BP0DMV9 641 aaKnown RBP9.92□□□□□ -0.82
CCDC93-208ENST00000474546 NCLP19338 710 aaKnown RBP9.92□□□□□ -0.82
CCDC93-208ENST00000474546 NUCB1Q02818 461 aa9.92□□□□□ -0.82
CCDC93-208ENST00000474546 RABEP1Q15276 862 aa9.92□□□□□ -0.82
CCDC93-208ENST00000474546 FAM196AQ6ZSG2 479 aa9.92□□□□□ -0.82
CCDC93-208ENST00000474546 SPINK5Q9NQ38 1064 aaPredicted RBP9.92□□□□□ -0.82
CCDC93-208ENST00000474546 SMC4Q9NTJ3 1288 aa9.92□□□□□ -0.82
CCDC93-208ENST00000474546 NEXMIFQ5QGS0 1516 aa9.92□□□□□ -0.82
CCDC93-208ENST00000474546 PLEKHG1Q9ULL1 1385 aa9.91□□□□□ -0.82
CCDC93-208ENST00000474546 OFD1O75665 1012 aa9.91□□□□□ -0.82
CCDC93-208ENST00000474546 NASPP49321 788 aaPredicted RBP9.91□□□□□ -0.82
CCDC93-208ENST00000474546 RGS19P49795 217 aa9.91□□□□□ -0.82
CCDC93-208ENST00000474546 MFAP1P55081 439 aaKnown RBP9.91□□□□□ -0.82
CCDC93-208ENST00000474546 ZNF445P59923 1031 aa9.91□□□□□ -0.82
CCDC93-208ENST00000474546 ATF5Q9Y2D1 282 aaPredicted RBP9.91□□□□□ -0.82
CCDC93-208ENST00000474546 CDC42BPGQ6DT37 1551 aa9.9□□□□□ -0.82
CCDC93-208ENST00000474546 TOMM70O94826 608 aa9.9□□□□□ -0.82
CCDC93-208ENST00000474546 PHF14O94880 888 aa9.9□□□□□ -0.82
CCDC93-208ENST00000474546 MBD3O95983 291 aa9.9□□□□□ -0.82
CCDC93-208ENST00000474546 MCM2P49736 904 aa9.9□□□□□ -0.82
CCDC93-208ENST00000474546 FAM182BQ5T319 152 aa9.9□□□□□ -0.82
CCDC93-208ENST00000474546 SKAP1Q86WV1 359 aa9.9□□□□□ -0.82
CCDC93-208ENST00000474546 SYAP1Q96A49 352 aaPredicted RBP9.9□□□□□ -0.82
CCDC93-208ENST00000474546 PPLO60437 1756 aa9.9□□□□□ -0.82
CCDC93-208ENST00000474546 NOS1P29475 1434 aa9.9□□□□□ -0.83
CCDC93-208ENST00000474546 KIF3CO14782 793 aa9.89□□□□□ -0.83
CCDC93-208ENST00000474546 ZNF500O60304 480 aaPredicted RBP9.89□□□□□ -0.83
CCDC93-208ENST00000474546 CDC45O75419 566 aa9.89□□□□□ -0.83
CCDC93-208ENST00000474546 HDGFP51858 240 aaKnown RBP9.89□□□□□ -0.83
CCDC93-208ENST00000474546 LMOD3Q0VAK6 560 aa9.89□□□□□ -0.83
CCDC93-208ENST00000474546 FAM98CQ17RN3 349 aaKnown RBP9.89□□□□□ -0.83
CCDC93-208ENST00000474546 CHD1LQ86WJ1 897 aa9.89□□□□□ -0.83
CCDC93-208ENST00000474546 ITPRIPQ8IWB1 547 aa9.89□□□□□ -0.83
CCDC93-208ENST00000474546 TNPO1Q92973 898 aaKnown RBP9.89□□□□□ -0.83
CCDC93-208ENST00000474546 ARXQ96QS3 562 aa9.89□□□□□ -0.83
CCDC93-208ENST00000474546 ZNF692Q9BU19 519 aaPredicted RBP9.89□□□□□ -0.83
CCDC93-208ENST00000474546 ZBTB40Q9NUA8 1239 aa9.89□□□□□ -0.83
CCDC93-208ENST00000474546 DYNC1I1O14576 645 aa9.88□□□□□ -0.83
CCDC93-208ENST00000474546 ST18O60284 1047 aa9.88□□□□□ -0.83
CCDC93-208ENST00000474546 ZNF526Q8TF50 670 aaPredicted RBP9.88□□□□□ -0.83
CCDC93-208ENST00000474546 CARD14Q9BXL6 1004 aa9.88□□□□□ -0.83
CCDC93-208ENST00000474546 C14orf93Q9H972 538 aaKnown RBP9.88□□□□□ -0.83
CCDC93-208ENST00000474546 CCDC39Q9UFE4 941 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms