RNA–Protein interactions for RNA: ENST00000474370.1

RP9-203, Transcript of RP9, pre-mRNA splicing factor, humanhuman

TSL 2

Gene RP9, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RP9-203ENST00000474370 SGIP1Q9BQI5 828 aa35.24■■■■□ 3.23
RP9-203ENST00000474370 MTFR1LQ9H019 292 aa35.23■■■■□ 3.23
RP9-203ENST00000474370 CLSPNQ9HAW4 1339 aa35.23■■■■□ 3.23
RP9-203ENST00000474370 INSRP06213 1382 aa35.23■■■■□ 3.23
RP9-203ENST00000474370 USHBP1Q8N6Y0 703 aa35.22■■■■□ 3.23
RP9-203ENST00000474370 LY75O60449 1722 aa35.22■■■■□ 3.23
RP9-203ENST00000474370 PRIM1P49642 420 aaKnown RBP35.21■■■■□ 3.23
RP9-203ENST00000474370 HSP90AB2PQ58FF8 381 aa35.21■■■■□ 3.23
RP9-203ENST00000474370 NSD3Q9BZ95 1437 aa35.21■■■■□ 3.23
RP9-203ENST00000474370 KIF24Q5T7B8 1368 aa35.2■■■■□ 3.23
RP9-203ENST00000474370 QSER1Q2KHR3 1735 aa35.2■■■■□ 3.23
RP9-203ENST00000474370 FLT4P35916 1363 aa35.19■■■■□ 3.22
RP9-203ENST00000474370 SMG6Q86US8 1419 aaKnown RBP35.19■■■■□ 3.22
RP9-203ENST00000474370 AKT1S1Q96B36 256 aa35.19■■■■□ 3.22
RP9-203ENST00000474370 SLC27A3Q5K4L6 730 aa35.18■■■■□ 3.22
RP9-203ENST00000474370 CGNL1Q0VF96 1302 aa35.17■■■■□ 3.22
RP9-203ENST00000474370 TUBGCP6Q96RT7 1819 aa35.16■■■■□ 3.22
RP9-203ENST00000474370 ANKRD26Q9UPS8 1709 aa35.16■■■■□ 3.22
RP9-203ENST00000474370 SYTL4Q96C24 671 aaPredicted RBP35.16■■■■□ 3.22
RP9-203ENST00000474370 PCGF6Q9BYE7 350 aa35.14■■■■□ 3.22
RP9-203ENST00000474370 EMILIN1Q9Y6C2 1016 aa35.13■■■■□ 3.21
RP9-203ENST00000474370 KCNQ4P56696 695 aa35.12■■■■□ 3.21
RP9-203ENST00000474370 RAPGEF4Q8WZA2 1011 aa35.12■■■■□ 3.21
RP9-203ENST00000474370 FHDC1Q9C0D6 1143 aaPredicted RBP35.11■■■■□ 3.21
RP9-203ENST00000474370 COL24A1Q17RW2 1714 aa35.11■■■■□ 3.21
RP9-203ENST00000474370 YY1P25490 414 aa35.1■■■■□ 3.21
RP9-203ENST00000474370 SYT17Q9BSW7 474 aa35.1■■■■□ 3.21
RP9-203ENST00000474370 TATP17735 454 aaPredicted RBP35.09■■■■□ 3.21
RP9-203ENST00000474370 PNPLA7Q6ZV29 1317 aa35.08■■■■□ 3.21
RP9-203ENST00000474370 NCAPD2Q15021 1401 aa35.08■■■■□ 3.21
RP9-203ENST00000474370 PKD1L3Q7Z443 1732 aa35.07■■■■□ 3.2
RP9-203ENST00000474370 MAP2P11137 1827 aaKnown RBP35.07■■■■□ 3.2
RP9-203ENST00000474370 DCAF8L1A6NGE4 600 aa35.06■■■■□ 3.2
RP9-203ENST00000474370 TOGARAM1Q9Y4F4 1720 aa35.04■■■■□ 3.2
RP9-203ENST00000474370 ARXQ96QS3 562 aa35.04■■■■□ 3.2
RP9-203ENST00000474370 PCDH11XQ9BZA7 1347 aa35.04■■■■□ 3.2
RP9-203ENST00000474370 PCDH11YQ9BZA8 1340 aa35.04■■■■□ 3.2
RP9-203ENST00000474370 MAP3K5Q99683 1374 aa35.02■■■■□ 3.2
RP9-203ENST00000474370 CYP27B1O15528 508 aa35.02■■■■□ 3.2
RP9-203ENST00000474370 SLC16A10Q8TF71 515 aa35.02■■■■□ 3.2
RP9-203ENST00000474370 CCNL1Q9UK58 526 aaPredicted RBP35.01■■■■□ 3.2
RP9-203ENST00000474370 WASHC2AQ641Q2 1341 aa35■■■■□ 3.19
RP9-203ENST00000474370 ITGB4P16144 1822 aa34.99■■■■□ 3.19
RP9-203ENST00000474370 TFCP2L1Q9NZI6 479 aa34.99■■■■□ 3.19
RP9-203ENST00000474370 PPM1GO15355 546 aaPredicted RBP34.97■■■■□ 3.19
RP9-203ENST00000474370 C5P01031 1676 aa34.97■■■■□ 3.19
RP9-203ENST00000474370 UTRNP46939 3433 aa34.97■■■■□ 3.19
RP9-203ENST00000474370 POLKQ9UBT6 870 aa34.96■■■■□ 3.19
RP9-203ENST00000474370 TAF1LQ8IZX4 1826 aa34.95■■■■□ 3.19
RP9-203ENST00000474370 HSPA5P11021 654 aaKnown RBP34.93■■■■□ 3.18
RP9-203ENST00000474370 EYA1Q99502 592 aa34.93■■■■□ 3.18
RP9-203ENST00000474370 POLR3GLQ9BT43 218 aa34.92■■■■□ 3.18
RP9-203ENST00000474370 EIF4G2P78344 907 aaKnown RBP eCLIP34.91■■■■□ 3.18
RP9-203ENST00000474370 PALLDQ8WX93 1383 aa34.9■■■■□ 3.18
RP9-203ENST00000474370 NKX1-1Q15270 411 aaPredicted RBP34.9■■■■□ 3.18
RP9-203ENST00000474370 MPRIPQ6WCQ1 1025 aa34.9■■■■□ 3.18
RP9-203ENST00000474370 COL23A1Q86Y22 540 aaPredicted RBP34.88■■■■□ 3.17
RP9-203ENST00000474370 POLD1P28340 1107 aa34.87■■■■□ 3.17
RP9-203ENST00000474370 CHD4Q14839 1912 aa34.85■■■■□ 3.17
RP9-203ENST00000474370 SPG7Q9UQ90 795 aa34.85■■■■□ 3.17
RP9-203ENST00000474370 EIF4A2Q14240 407 aaKnown RBP34.84■■■■□ 3.17
RP9-203ENST00000474370 PIGBQ92521 554 aa34.84■■■■□ 3.17
RP9-203ENST00000474370 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP34.84■■■■□ 3.17
RP9-203ENST00000474370 TNNT2P45379 298 aaPredicted RBP34.83■■■■□ 3.17
RP9-203ENST00000474370 PANK3Q9H999 370 aa34.83■■■■□ 3.17
RP9-203ENST00000474370 C4BP0C0L5 1744 aa34.82■■■■□ 3.16
RP9-203ENST00000474370 SMARCC1Q92922 1105 aaPredicted RBP34.8■■■■□ 3.16
RP9-203ENST00000474370 CCER1Q8TC90 406 aaPredicted RBP34.79■■■■□ 3.16
RP9-203ENST00000474370 MSH5O43196 834 aa34.77■■■■□ 3.16
RP9-203ENST00000474370 PHKG2P15735 406 aa34.77■■■■□ 3.16
RP9-203ENST00000474370 KLHL34Q8N239 644 aa34.77■■■■□ 3.16
RP9-203ENST00000474370 UBR3Q6ZT12 1888 aa34.77■■■■□ 3.16
RP9-203ENST00000474370 NLGN2Q8NFZ4 835 aa34.76■■■■□ 3.16
RP9-203ENST00000474370 IGSF1Q8N6C5 1336 aa34.76■■■■□ 3.15
RP9-203ENST00000474370 PLEKHG2Q9H7P9 1386 aa34.75■■■■□ 3.15
RP9-203ENST00000474370 AMIGO3Q86WK7 504 aa34.75■■■■□ 3.15
RP9-203ENST00000474370 MSL1Q68DK7 614 aa34.74■■■■□ 3.15
RP9-203ENST00000474370 IFNL2Q8IZJ0 200 aa34.74■■■■□ 3.15
RP9-203ENST00000474370 ZNF784Q8NCA9 323 aaPredicted RBP34.73■■■■□ 3.15
RP9-203ENST00000474370 HMGB2P26583 209 aaKnown RBP34.72■■■■□ 3.15
RP9-203ENST00000474370 GPR162Q16538 588 aa34.71■■■■□ 3.15
RP9-203ENST00000474370 FLAD1Q8NFF5 587 aa34.71■■■■□ 3.15
RP9-203ENST00000474370 TMOD3Q9NYL9 352 aa34.7■■■■□ 3.15
RP9-203ENST00000474370 LOC102724428A0A0B4J2F2 783 aa34.69■■■■□ 3.14
RP9-203ENST00000474370 SIK1P57059 783 aa34.69■■■■□ 3.14
RP9-203ENST00000474370 ASAP1Q9ULH1 1129 aa34.69■■■■□ 3.14
RP9-203ENST00000474370 GOLGB1Q14789 3259 aaKnown RBP34.68■■■■□ 3.14
RP9-203ENST00000474370 SMIM5Q71RC9 77 aa34.67■■■■□ 3.14
RP9-203ENST00000474370 LINC00116Q8NCU8 138 aa34.67■■■■□ 3.14
RP9-203ENST00000474370 AK7Q96M32 723 aa34.67■■■■□ 3.14
RP9-203ENST00000474370 ITPK1Q13572 414 aa34.65■■■■□ 3.14
RP9-203ENST00000474370 ATG3Q9NT62 314 aa34.64■■■■□ 3.14
RP9-203ENST00000474370 MORC1Q86VD1 984 aa34.63■■■■□ 3.13
RP9-203ENST00000474370 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP34.61■■■■□ 3.13
RP9-203ENST00000474370 PELP1Q8IZL8 1130 aaKnown RBP34.61■■■■□ 3.13
RP9-203ENST00000474370 KDRP35968 1356 aa34.61■■■■□ 3.13
RP9-203ENST00000474370 PHF14O94880 888 aa34.6■■■■□ 3.13
RP9-203ENST00000474370 YBX3P16989 372 aaKnown RBP eCLIP34.6■■■■□ 3.13
RP9-203ENST00000474370 KDM6AO15550 1401 aaPredicted RBP34.59■■■■□ 3.13
RP9-203ENST00000474370 SSFA2P28290 1259 aa34.59■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms