RNA–Protein interactions for RNA: ENST00000474258.1

SEMA4D-216, Transcript of semaphorin 4D, humanhuman

TSL 4

Gene SEMA4D, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-216ENST00000474258 ATF5Q9Y2D1 282 aaPredicted RBP15.36■□□□□ 0.05
SEMA4D-216ENST00000474258 CGNL1Q0VF96 1302 aa15.36■□□□□ 0.05
SEMA4D-216ENST00000474258 INSRP06213 1382 aa15.36■□□□□ 0.05
SEMA4D-216ENST00000474258 KIF24Q5T7B8 1368 aa15.36■□□□□ 0.05
SEMA4D-216ENST00000474258 MEGF6O75095 1541 aa15.35■□□□□ 0.05
SEMA4D-216ENST00000474258 PRIM1P49642 420 aaKnown RBP15.35■□□□□ 0.05
SEMA4D-216ENST00000474258 HSP90AB2PQ58FF8 381 aa15.35■□□□□ 0.05
SEMA4D-216ENST00000474258 RAPGEF4Q8WZA2 1011 aa15.35■□□□□ 0.05
SEMA4D-216ENST00000474258 SYTL4Q96C24 671 aaPredicted RBP15.35■□□□□ 0.05
SEMA4D-216ENST00000474258 FLT4P35916 1363 aa15.35■□□□□ 0.05
SEMA4D-216ENST00000474258 NSD3Q9BZ95 1437 aa15.34■□□□□ 0.05
SEMA4D-216ENST00000474258 LY75O60449 1722 aa15.34■□□□□ 0.05
SEMA4D-216ENST00000474258 QSER1Q2KHR3 1735 aa15.34■□□□□ 0.05
SEMA4D-216ENST00000474258 ZEB1P37275 1124 aaPredicted RBP15.34■□□□□ 0.05
SEMA4D-216ENST00000474258 PTGER2P43116 358 aa15.34■□□□□ 0.05
SEMA4D-216ENST00000474258 SLC27A3Q5K4L6 730 aa15.34■□□□□ 0.05
SEMA4D-216ENST00000474258 USHBP1Q8N6Y0 703 aa15.34■□□□□ 0.05
SEMA4D-216ENST00000474258 MTFR1LQ9H019 292 aa15.34■□□□□ 0.05
SEMA4D-216ENST00000474258 LRRC4BQ9NT99 713 aa15.34■□□□□ 0.05
SEMA4D-216ENST00000474258 TATP17735 454 aaPredicted RBP15.33■□□□□ 0.04
SEMA4D-216ENST00000474258 ZNF827Q17R98 1081 aa15.31■□□□□ 0.04
SEMA4D-216ENST00000474258 ANKRD26Q9UPS8 1709 aa15.31■□□□□ 0.04
SEMA4D-216ENST00000474258 TUBGCP6Q96RT7 1819 aa15.31■□□□□ 0.04
SEMA4D-216ENST00000474258 ITGB4P16144 1822 aa15.3■□□□□ 0.04
SEMA4D-216ENST00000474258 AKT1S1Q96B36 256 aa15.3■□□□□ 0.04
SEMA4D-216ENST00000474258 POLR3GLQ9BT43 218 aa15.3■□□□□ 0.04
SEMA4D-216ENST00000474258 EMILIN1Q9Y6C2 1016 aa15.3■□□□□ 0.04
SEMA4D-216ENST00000474258 NSD2O96028 1365 aa15.29■□□□□ 0.04
SEMA4D-216ENST00000474258 PCDH11XQ9BZA7 1347 aa15.29■□□□□ 0.04
SEMA4D-216ENST00000474258 PCDH11YQ9BZA8 1340 aa15.29■□□□□ 0.04
SEMA4D-216ENST00000474258 PPM1GO15355 546 aaPredicted RBP15.29■□□□□ 0.04
SEMA4D-216ENST00000474258 EIF4G2P78344 907 aaKnown RBP eCLIP15.29■□□□□ 0.04
SEMA4D-216ENST00000474258 SGIP1Q9BQI5 828 aa15.29■□□□□ 0.04
SEMA4D-216ENST00000474258 SLC16A10Q8TF71 515 aa15.28■□□□□ 0.04
SEMA4D-216ENST00000474258 CHD4Q14839 1912 aa15.27■□□□□ 0.04
SEMA4D-216ENST00000474258 WASHC2AQ641Q2 1341 aa15.27■□□□□ 0.04
SEMA4D-216ENST00000474258 PKD1L3Q7Z443 1732 aa15.27■□□□□ 0.04
SEMA4D-216ENST00000474258 YY1P25490 414 aa15.27■□□□□ 0.04
SEMA4D-216ENST00000474258 KCNQ4P56696 695 aa15.27■□□□□ 0.04
SEMA4D-216ENST00000474258 SYT17Q9BSW7 474 aa15.27■□□□□ 0.04
SEMA4D-216ENST00000474258 FHDC1Q9C0D6 1143 aaPredicted RBP15.27■□□□□ 0.04
SEMA4D-216ENST00000474258 TFCP2L1Q9NZI6 479 aa15.27■□□□□ 0.04
SEMA4D-216ENST00000474258 TAF1LQ8IZX4 1826 aa15.27■□□□□ 0.03
SEMA4D-216ENST00000474258 COL24A1Q17RW2 1714 aa15.26■□□□□ 0.03
SEMA4D-216ENST00000474258 ARXQ96QS3 562 aa15.26■□□□□ 0.03
SEMA4D-216ENST00000474258 CCNL1Q9UK58 526 aaPredicted RBP15.26■□□□□ 0.03
SEMA4D-216ENST00000474258 HSPA5P11021 654 aaKnown RBP15.25■□□□□ 0.03
SEMA4D-216ENST00000474258 HMGB2P26583 209 aaKnown RBP15.25■□□□□ 0.03
SEMA4D-216ENST00000474258 PNPLA7Q6ZV29 1317 aa15.24■□□□□ 0.03
SEMA4D-216ENST00000474258 CYP27B1O15528 508 aa15.24■□□□□ 0.03
SEMA4D-216ENST00000474258 POLKQ9UBT6 870 aa15.24■□□□□ 0.03
SEMA4D-216ENST00000474258 C5P01031 1676 aa15.24■□□□□ 0.03
SEMA4D-216ENST00000474258 NCAPD2Q15021 1401 aa15.24■□□□□ 0.03
SEMA4D-216ENST00000474258 MPRIPQ6WCQ1 1025 aa15.23■□□□□ 0.03
SEMA4D-216ENST00000474258 EYA1Q99502 592 aa15.23■□□□□ 0.03
SEMA4D-216ENST00000474258 SPG7Q9UQ90 795 aa15.23■□□□□ 0.03
SEMA4D-216ENST00000474258 TOGARAM1Q9Y4F4 1720 aa15.23■□□□□ 0.03
SEMA4D-216ENST00000474258 POLD1P28340 1107 aa15.22■□□□□ 0.03
SEMA4D-216ENST00000474258 TNNT2P45379 298 aaPredicted RBP15.22■□□□□ 0.03
SEMA4D-216ENST00000474258 PANK3Q9H999 370 aa15.22■□□□□ 0.03
SEMA4D-216ENST00000474258 MAP3K5Q99683 1374 aa15.22■□□□□ 0.03
SEMA4D-216ENST00000474258 NKX1-1Q15270 411 aaPredicted RBP15.21■□□□□ 0.03
SEMA4D-216ENST00000474258 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.21■□□□□ 0.03
SEMA4D-216ENST00000474258 SMARCC1Q92922 1105 aaPredicted RBP15.2■□□□□ 0.02
SEMA4D-216ENST00000474258 PALLDQ8WX93 1383 aa15.2■□□□□ 0.02
SEMA4D-216ENST00000474258 MSH5O43196 834 aa15.19■□□□□ 0.02
SEMA4D-216ENST00000474258 EIF4A2Q14240 407 aaKnown RBP15.19■□□□□ 0.02
SEMA4D-216ENST00000474258 COL23A1Q86Y22 540 aaPredicted RBP15.18■□□□□ 0.02
SEMA4D-216ENST00000474258 IFNL2Q8IZJ0 200 aa15.18■□□□□ 0.02
SEMA4D-216ENST00000474258 PIGBQ92521 554 aa15.17■□□□□ 0.02
SEMA4D-216ENST00000474258 C4BP0C0L5 1744 aa15.17■□□□□ 0.02
SEMA4D-216ENST00000474258 UBR3Q6ZT12 1888 aa15.16■□□□□ 0.02
SEMA4D-216ENST00000474258 KLHL34Q8N239 644 aa15.16■□□□□ 0.02
SEMA4D-216ENST00000474258 FLAD1Q8NFF5 587 aa15.16■□□□□ 0.02
SEMA4D-216ENST00000474258 PLEKHG2Q9H7P9 1386 aa15.15■□□□□ 0.02
SEMA4D-216ENST00000474258 PHKG2P15735 406 aa15.15■□□□□ 0.02
SEMA4D-216ENST00000474258 MORC1Q86VD1 984 aa15.15■□□□□ 0.02
SEMA4D-216ENST00000474258 TMOD3Q9NYL9 352 aa15.15■□□□□ 0.02
SEMA4D-216ENST00000474258 GPR162Q16538 588 aa15.14■□□□□ 0.01
SEMA4D-216ENST00000474258 KNSTRNQ9Y448 316 aa15.14■□□□□ 0.01
SEMA4D-216ENST00000474258 IGSF1Q8N6C5 1336 aa15.14■□□□□ 0.01
SEMA4D-216ENST00000474258 AK7Q96M32 723 aa15.13■□□□□ 0.01
SEMA4D-216ENST00000474258 LOC102724428A0A0B4J2F2 783 aa15.12■□□□□ 0.01
SEMA4D-216ENST00000474258 SIK1P57059 783 aa15.12■□□□□ 0.01
SEMA4D-216ENST00000474258 HSP90AB1P08238 724 aaKnown RBP15.11■□□□□ 0.01
SEMA4D-216ENST00000474258 PLEKHO1Q53GL0 409 aaPredicted RBP15.11■□□□□ 0.01
SEMA4D-216ENST00000474258 MSL1Q68DK7 614 aa15.11■□□□□ 0.01
SEMA4D-216ENST00000474258 ASAP1Q9ULH1 1129 aa15.11■□□□□ 0.01
SEMA4D-216ENST00000474258 ERVV-2B6SEH9 535 aa15.1■□□□□ 0.01
SEMA4D-216ENST00000474258 AMOTQ4VCS5 1084 aa15.1■□□□□ 0.01
SEMA4D-216ENST00000474258 NLGN2Q8NFZ4 835 aa15.1■□□□□ 0.01
SEMA4D-216ENST00000474258 UTRNP46939 3433 aa15.09■□□□□ 0.01
SEMA4D-216ENST00000474258 ATP6V1AP38606 617 aa15.09■□□□□ 0.01
SEMA4D-216ENST00000474258 PELP1Q8IZL8 1130 aaKnown RBP15.09■□□□□ 0.01
SEMA4D-216ENST00000474258 LINC00116Q8NCU8 138 aa15.09■□□□□ 0.01
SEMA4D-216ENST00000474258 DCAF5Q96JK2 942 aa15.09■□□□□ 0.01
SEMA4D-216ENST00000474258 ATG3Q9NT62 314 aa15.09■□□□□ 0.01
SEMA4D-216ENST00000474258 VIRMAQ69YN4 1812 aaKnown RBP15.08■□□□□ 0.01
SEMA4D-216ENST00000474258 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.08■□□□□ 0
SEMA4D-216ENST00000474258 PHF14O94880 888 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms