RNA–Protein interactions for RNA: ENST00000474251.5

PDE6B-208, Transcript of phosphodiesterase 6B, humanhuman

TSL 4

Gene PDE6B, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-208ENST00000474251 ITGB4P16144 1822 aa25.25■■□□□ 1.63
PDE6B-208ENST00000474251 NSD2O96028 1365 aa25.24■■□□□ 1.63
PDE6B-208ENST00000474251 ZNF827Q17R98 1081 aa25.24■■□□□ 1.63
PDE6B-208ENST00000474251 SGIP1Q9BQI5 828 aa25.24■■□□□ 1.63
PDE6B-208ENST00000474251 TAF1LQ8IZX4 1826 aa25.23■■□□□ 1.63
PDE6B-208ENST00000474251 PKD1L3Q7Z443 1732 aa25.23■■□□□ 1.63
PDE6B-208ENST00000474251 SMG6Q86US8 1419 aaKnown RBP25.22■■□□□ 1.63
PDE6B-208ENST00000474251 YY1P25490 414 aa25.22■■□□□ 1.63
PDE6B-208ENST00000474251 TOGARAM1Q9Y4F4 1720 aa25.21■■□□□ 1.63
PDE6B-208ENST00000474251 CDCA8Q53HL2 280 aa25.21■■□□□ 1.63
PDE6B-208ENST00000474251 C5P01031 1676 aa25.2■■□□□ 1.63
PDE6B-208ENST00000474251 NBPF6Q5VWK0 638 aa25.2■■□□□ 1.62
PDE6B-208ENST00000474251 ZCRB1Q8TBF4 217 aaKnown RBP25.2■■□□□ 1.62
PDE6B-208ENST00000474251 NBPF4Q96M43 638 aa25.2■■□□□ 1.62
PDE6B-208ENST00000474251 FLT4P35916 1363 aa25.19■■□□□ 1.62
PDE6B-208ENST00000474251 DCAF8L1A6NGE4 600 aa25.19■■□□□ 1.62
PDE6B-208ENST00000474251 SLC27A3Q5K4L6 730 aa25.19■■□□□ 1.62
PDE6B-208ENST00000474251 NSD3Q9BZ95 1437 aa25.19■■□□□ 1.62
PDE6B-208ENST00000474251 INSRP06213 1382 aa25.18■■□□□ 1.62
PDE6B-208ENST00000474251 KIF24Q5T7B8 1368 aa25.18■■□□□ 1.62
PDE6B-208ENST00000474251 PRIM1P49642 420 aaKnown RBP25.18■■□□□ 1.62
PDE6B-208ENST00000474251 USHBP1Q8N6Y0 703 aa25.18■■□□□ 1.62
PDE6B-208ENST00000474251 AKT1S1Q96B36 256 aa25.18■■□□□ 1.62
PDE6B-208ENST00000474251 SYTL4Q96C24 671 aaPredicted RBP25.17■■□□□ 1.62
PDE6B-208ENST00000474251 FHDC1Q9C0D6 1143 aaPredicted RBP25.17■■□□□ 1.62
PDE6B-208ENST00000474251 CGNL1Q0VF96 1302 aa25.16■■□□□ 1.62
PDE6B-208ENST00000474251 SYT17Q9BSW7 474 aa25.15■■□□□ 1.62
PDE6B-208ENST00000474251 CARD14Q9BXL6 1004 aa25.15■■□□□ 1.62
PDE6B-208ENST00000474251 HSP90AB2PQ58FF8 381 aa25.14■■□□□ 1.62
PDE6B-208ENST00000474251 RAPGEF4Q8WZA2 1011 aa25.13■■□□□ 1.61
PDE6B-208ENST00000474251 TIMELESSQ9UNS1 1208 aa25.13■■□□□ 1.61
PDE6B-208ENST00000474251 MAP3K5Q99683 1374 aa25.13■■□□□ 1.61
PDE6B-208ENST00000474251 PNPLA7Q6ZV29 1317 aa25.12■■□□□ 1.61
PDE6B-208ENST00000474251 NCAPD2Q15021 1401 aa25.12■■□□□ 1.61
PDE6B-208ENST00000474251 UTRNP46939 3433 aa25.12■■□□□ 1.61
PDE6B-208ENST00000474251 KCNQ4P56696 695 aa25.12■■□□□ 1.61
PDE6B-208ENST00000474251 CLSPNQ9HAW4 1339 aa25.12■■□□□ 1.61
PDE6B-208ENST00000474251 ARXQ96QS3 562 aa25.11■■□□□ 1.61
PDE6B-208ENST00000474251 TATP17735 454 aaPredicted RBP25.1■■□□□ 1.61
PDE6B-208ENST00000474251 SLC16A10Q8TF71 515 aa25.09■■□□□ 1.61
PDE6B-208ENST00000474251 EMILIN1Q9Y6C2 1016 aa25.09■■□□□ 1.61
PDE6B-208ENST00000474251 PCDH11XQ9BZA7 1347 aa25.09■■□□□ 1.61
PDE6B-208ENST00000474251 PCDH11YQ9BZA8 1340 aa25.09■■□□□ 1.61
PDE6B-208ENST00000474251 UBR3Q6ZT12 1888 aa25.07■■□□□ 1.6
PDE6B-208ENST00000474251 CCNL1Q9UK58 526 aaPredicted RBP25.07■■□□□ 1.6
PDE6B-208ENST00000474251 TFCP2L1Q9NZI6 479 aa25.06■■□□□ 1.6
PDE6B-208ENST00000474251 C4BP0C0L5 1744 aa25.05■■□□□ 1.6
PDE6B-208ENST00000474251 CYP27B1O15528 508 aa25.03■■□□□ 1.6
PDE6B-208ENST00000474251 POLD1P28340 1107 aa25■■□□□ 1.59
PDE6B-208ENST00000474251 PCGF6Q9BYE7 350 aa25■■□□□ 1.59
PDE6B-208ENST00000474251 WASHC2AQ641Q2 1341 aa25■■□□□ 1.59
PDE6B-208ENST00000474251 PALLDQ8WX93 1383 aa25■■□□□ 1.59
PDE6B-208ENST00000474251 PPM1GO15355 546 aaPredicted RBP24.98■■□□□ 1.59
PDE6B-208ENST00000474251 MPRIPQ6WCQ1 1025 aa24.96■■□□□ 1.59
PDE6B-208ENST00000474251 COL23A1Q86Y22 540 aaPredicted RBP24.96■■□□□ 1.59
PDE6B-208ENST00000474251 GOLGB1Q14789 3259 aaKnown RBP24.96■■□□□ 1.59
PDE6B-208ENST00000474251 KLHL34Q8N239 644 aa24.95■■□□□ 1.58
PDE6B-208ENST00000474251 EYA1Q99502 592 aa24.95■■□□□ 1.58
PDE6B-208ENST00000474251 POLKQ9UBT6 870 aa24.95■■□□□ 1.58
PDE6B-208ENST00000474251 POLR3GLQ9BT43 218 aa24.94■■□□□ 1.58
PDE6B-208ENST00000474251 NKX1-1Q15270 411 aaPredicted RBP24.93■■□□□ 1.58
PDE6B-208ENST00000474251 ZNF784Q8NCA9 323 aaPredicted RBP24.93■■□□□ 1.58
PDE6B-208ENST00000474251 SPG7Q9UQ90 795 aa24.92■■□□□ 1.58
PDE6B-208ENST00000474251 MSH5O43196 834 aa24.91■■□□□ 1.58
PDE6B-208ENST00000474251 NLGN2Q8NFZ4 835 aa24.91■■□□□ 1.58
PDE6B-208ENST00000474251 PIGBQ92521 554 aa24.9■■□□□ 1.58
PDE6B-208ENST00000474251 SMARCC1Q92922 1105 aaPredicted RBP24.9■■□□□ 1.58
PDE6B-208ENST00000474251 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.9■■□□□ 1.58
PDE6B-208ENST00000474251 VIRMAQ69YN4 1812 aaKnown RBP24.9■■□□□ 1.58
PDE6B-208ENST00000474251 PLEKHG2Q9H7P9 1386 aa24.9■■□□□ 1.58
PDE6B-208ENST00000474251 ZNF831Q5JPB2 1677 aa24.89■■□□□ 1.58
PDE6B-208ENST00000474251 HSPA5P11021 654 aaKnown RBP24.89■■□□□ 1.58
PDE6B-208ENST00000474251 HMGB2P26583 209 aaKnown RBP24.89■■□□□ 1.58
PDE6B-208ENST00000474251 EIF4G2P78344 907 aaKnown RBP eCLIP24.89■■□□□ 1.58
PDE6B-208ENST00000474251 GPR162Q16538 588 aa24.89■■□□□ 1.58
PDE6B-208ENST00000474251 EIF4A2Q14240 407 aaKnown RBP24.88■■□□□ 1.57
PDE6B-208ENST00000474251 MSL1Q68DK7 614 aa24.88■■□□□ 1.57
PDE6B-208ENST00000474251 COL5A3P25940 1745 aaPredicted RBP24.88■■□□□ 1.57
PDE6B-208ENST00000474251 TNNT2P45379 298 aaPredicted RBP24.87■■□□□ 1.57
PDE6B-208ENST00000474251 FLAD1Q8NFF5 587 aa24.86■■□□□ 1.57
PDE6B-208ENST00000474251 PHKG2P15735 406 aa24.85■■□□□ 1.57
PDE6B-208ENST00000474251 AMIGO3Q86WK7 504 aa24.85■■□□□ 1.57
PDE6B-208ENST00000474251 IGSF1Q8N6C5 1336 aa24.85■■□□□ 1.57
PDE6B-208ENST00000474251 IFNL2Q8IZJ0 200 aa24.84■■□□□ 1.57
PDE6B-208ENST00000474251 AK7Q96M32 723 aa24.84■■□□□ 1.57
PDE6B-208ENST00000474251 PANK3Q9H999 370 aa24.84■■□□□ 1.57
PDE6B-208ENST00000474251 PELP1Q8IZL8 1130 aaKnown RBP24.83■■□□□ 1.57
PDE6B-208ENST00000474251 TMOD3Q9NYL9 352 aa24.83■■□□□ 1.57
PDE6B-208ENST00000474251 SCN11AQ9UI33 1791 aa24.82■■□□□ 1.56
PDE6B-208ENST00000474251 LOC102724428A0A0B4J2F2 783 aa24.82■■□□□ 1.56
PDE6B-208ENST00000474251 SIK1P57059 783 aa24.82■■□□□ 1.56
PDE6B-208ENST00000474251 MYH14Q7Z406 1995 aaKnown RBP24.82■■□□□ 1.56
PDE6B-208ENST00000474251 KIF13BQ9NQT8 1826 aa24.82■■□□□ 1.56
PDE6B-208ENST00000474251 LINC00116Q8NCU8 138 aa24.81■■□□□ 1.56
PDE6B-208ENST00000474251 ASAP1Q9ULH1 1129 aa24.8■■□□□ 1.56
PDE6B-208ENST00000474251 C4AP0C0L4 1744 aa24.79■■□□□ 1.56
PDE6B-208ENST00000474251 YBX3P16989 372 aaKnown RBP eCLIP24.79■■□□□ 1.56
PDE6B-208ENST00000474251 KDRP35968 1356 aa24.79■■□□□ 1.56
PDE6B-208ENST00000474251 PHF14O94880 888 aa24.78■■□□□ 1.56
PDE6B-208ENST00000474251 SMIM5Q71RC9 77 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms