RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 OCSTAMPQ9BR26 566 aa9.77□□□□□ -0.85
GPNMB-209ENST00000474157 MAP3K4Q9Y6R4 1608 aa9.77□□□□□ -0.85
GPNMB-209ENST00000474157 WASHC2CQ9Y4E1 1318 aa9.77□□□□□ -0.85
GPNMB-209ENST00000474157 LINC01559Q495D7 138 aa9.76□□□□□ -0.85
GPNMB-209ENST00000474157 NAP1L5Q96NT1 182 aaPredicted RBP9.76□□□□□ -0.85
GPNMB-209ENST00000474157 ARHGAP9Q9BRR9 750 aa9.76□□□□□ -0.85
GPNMB-209ENST00000474157 PPP1R12CQ9BZL4 782 aa9.76□□□□□ -0.85
GPNMB-209ENST00000474157 SH3BP5LQ7L8J4 393 aa9.75□□□□□ -0.85
GPNMB-209ENST00000474157 FAM43AQ8N2R8 423 aa9.75□□□□□ -0.85
GPNMB-209ENST00000474157 BAP1Q92560 729 aa9.75□□□□□ -0.85
GPNMB-209ENST00000474157 KDM5BQ9UGL1 1544 aa9.75□□□□□ -0.85
GPNMB-209ENST00000474157 MAGI3Q5TCQ9 1506 aa9.74□□□□□ -0.85
GPNMB-209ENST00000474157 PALM3A6NDB9 673 aaPredicted RBP9.74□□□□□ -0.85
GPNMB-209ENST00000474157 RNF223E7ERA6 249 aa9.74□□□□□ -0.85
GPNMB-209ENST00000474157 RFX1P22670 979 aa9.74□□□□□ -0.85
GPNMB-209ENST00000474157 CFAP70Q5T0N1 1121 aa9.74□□□□□ -0.85
GPNMB-209ENST00000474157 ADAM32Q8TC27 787 aa9.74□□□□□ -0.85
GPNMB-209ENST00000474157 PCDHB9Q9Y5E1 797 aa9.74□□□□□ -0.85
GPNMB-209ENST00000474157 CENPJQ9HC77 1338 aaPredicted RBP9.74□□□□□ -0.85
GPNMB-209ENST00000474157 MAGEB6P1A0A0J9YX57 407 aa9.73□□□□□ -0.85
GPNMB-209ENST00000474157 ZBTB33Q86T24 672 aa9.73□□□□□ -0.85
GPNMB-209ENST00000474157 CARD14Q9BXL6 1004 aa9.73□□□□□ -0.85
GPNMB-209ENST00000474157 TFIP11Q9UBB9 837 aaKnown RBP9.73□□□□□ -0.85
GPNMB-209ENST00000474157 GGCXP38435 758 aa9.72□□□□□ -0.85
GPNMB-209ENST00000474157 AGERQ15109 404 aa9.72□□□□□ -0.85
GPNMB-209ENST00000474157 TBC1D9Q6ZT07 1266 aa9.72□□□□□ -0.85
GPNMB-209ENST00000474157 ZNF511Q8NB15 262 aa9.72□□□□□ -0.85
GPNMB-209ENST00000474157 FOXJ1Q92949 421 aa9.72□□□□□ -0.85
GPNMB-209ENST00000474157 NOP58Q9Y2X3 529 aaKnown RBP9.72□□□□□ -0.85
GPNMB-209ENST00000474157 WASHC2AQ641Q2 1341 aa9.72□□□□□ -0.85
GPNMB-209ENST00000474157 WDR7Q9Y4E6 1490 aa9.72□□□□□ -0.85
GPNMB-209ENST00000474157 KIF21BO75037 1637 aa9.71□□□□□ -0.85
GPNMB-209ENST00000474157 A0A0U1RQG5 324 aaPredicted RBP9.71□□□□□ -0.86
GPNMB-209ENST00000474157 PIK3CDO00329 1044 aa9.71□□□□□ -0.86
GPNMB-209ENST00000474157 LMOD1P29536 600 aaPredicted RBP9.71□□□□□ -0.86
GPNMB-209ENST00000474157 SH3RF1Q7Z6J0 888 aa9.71□□□□□ -0.86
GPNMB-209ENST00000474157 IGF1RP08069 1367 aa9.71□□□□□ -0.86
GPNMB-209ENST00000474157 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.7□□□□□ -0.86
GPNMB-209ENST00000474157 ZBTB24O43167 697 aaPredicted RBP9.7□□□□□ -0.86
GPNMB-209ENST00000474157 PPP1R15AO75807 674 aaPredicted RBP9.7□□□□□ -0.86
GPNMB-209ENST00000474157 HSP90AA2PQ14568 343 aaPredicted RBP9.7□□□□□ -0.86
GPNMB-209ENST00000474157 PLA2G2CQ5R387 149 aa9.7□□□□□ -0.86
GPNMB-209ENST00000474157 BPHLQ86WA6 291 aaPredicted RBP9.7□□□□□ -0.86
GPNMB-209ENST00000474157 ANKLE1Q8NAG6 615 aa9.7□□□□□ -0.86
GPNMB-209ENST00000474157 ZNF592Q92610 1267 aa9.7□□□□□ -0.86
GPNMB-209ENST00000474157 CHMP4AQ9BY43 222 aa9.7□□□□□ -0.86
GPNMB-209ENST00000474157 MAFBQ9Y5Q3 323 aaPredicted RBP9.7□□□□□ -0.86
GPNMB-209ENST00000474157 ADAMTSL3P82987 1691 aa9.7□□□□□ -0.86
GPNMB-209ENST00000474157 ATP9BO43861 1147 aa9.69□□□□□ -0.86
GPNMB-209ENST00000474157 RAPGEF3O95398 923 aa9.69□□□□□ -0.86
GPNMB-209ENST00000474157 CALD1Q05682 793 aaKnown RBP9.69□□□□□ -0.86
GPNMB-209ENST00000474157 MMRN1Q13201 1228 aa9.69□□□□□ -0.86
GPNMB-209ENST00000474157 PPP1R18Q6NYC8 613 aa9.69□□□□□ -0.86
GPNMB-209ENST00000474157 IPO4Q8TEX9 1081 aaKnown RBP9.69□□□□□ -0.86
GPNMB-209ENST00000474157 PBXIP1Q96AQ6 731 aa9.69□□□□□ -0.86
GPNMB-209ENST00000474157 ARAP3Q8WWN8 1544 aa9.68□□□□□ -0.86
GPNMB-209ENST00000474157 PHLDB1Q86UU1 1377 aa9.68□□□□□ -0.86
GPNMB-209ENST00000474157 CDK11BP21127 795 aaKnown RBP9.68□□□□□ -0.86
GPNMB-209ENST00000474157 MCCD1P59942 119 aaPredicted RBP9.68□□□□□ -0.86
GPNMB-209ENST00000474157 SH3BP2P78314 561 aa9.68□□□□□ -0.86
GPNMB-209ENST00000474157 C4orf48Q5BLP8 95 aa9.68□□□□□ -0.86
GPNMB-209ENST00000474157 DZIP3Q86Y13 1208 aaKnown RBP9.68□□□□□ -0.86
GPNMB-209ENST00000474157 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.68□□□□□ -0.86
GPNMB-209ENST00000474157 CEP126Q9P2H0 1117 aa9.68□□□□□ -0.86
GPNMB-209ENST00000474157 CUL7Q14999 1698 aa9.67□□□□□ -0.86
GPNMB-209ENST00000474157 HMGB1P09429 215 aaKnown RBP9.67□□□□□ -0.86
GPNMB-209ENST00000474157 SKIP12755 728 aa9.67□□□□□ -0.86
GPNMB-209ENST00000474157 TRIM32Q13049 653 aa9.67□□□□□ -0.86
GPNMB-209ENST00000474157 SLFNL1Q499Z3 407 aa9.67□□□□□ -0.86
GPNMB-209ENST00000474157 ERFEQ4G0M1 354 aa9.67□□□□□ -0.86
GPNMB-209ENST00000474157 FAM174AQ8TBP5 190 aa9.67□□□□□ -0.86
GPNMB-209ENST00000474157 RETREG2Q8NC44 543 aa9.66□□□□□ -0.86
GPNMB-209ENST00000474157 NFATC2IPQ8NCF5 419 aa9.66□□□□□ -0.86
GPNMB-209ENST00000474157 YEATS2Q9ULM3 1422 aa9.65□□□□□ -0.86
GPNMB-209ENST00000474157 SRPK2P78362 688 aaKnown RBP9.65□□□□□ -0.86
GPNMB-209ENST00000474157 RNF135Q8IUD6 432 aa9.65□□□□□ -0.86
GPNMB-209ENST00000474157 SLC10A4Q96EP9 437 aa9.65□□□□□ -0.86
GPNMB-209ENST00000474157 BIVM-ERCC5R4GMW8 1640 aa9.64□□□□□ -0.87
GPNMB-209ENST00000474157 USP17L3A6NCW0 530 aa9.64□□□□□ -0.87
GPNMB-209ENST00000474157 USP17L4A6NCW7 530 aa9.64□□□□□ -0.87
GPNMB-209ENST00000474157 USP17L5A8MUK1 530 aa9.64□□□□□ -0.87
GPNMB-209ENST00000474157 CDCA8Q53HL2 280 aa9.64□□□□□ -0.87
GPNMB-209ENST00000474157 USP17L2Q6R6M4 530 aa9.64□□□□□ -0.87
GPNMB-209ENST00000474157 USP17L1Q7RTZ2 530 aa9.64□□□□□ -0.87
GPNMB-209ENST00000474157 C1QTNF2Q9BXJ5 285 aa9.64□□□□□ -0.87
GPNMB-209ENST00000474157 NAP1L2Q9ULW6 460 aaPredicted RBP9.64□□□□□ -0.87
GPNMB-209ENST00000474157 SKOR1P84550 965 aa9.63□□□□□ -0.87
GPNMB-209ENST00000474157 CARMIL1Q5VZK9 1371 aa9.63□□□□□ -0.87
GPNMB-209ENST00000474157 RPIAP49247 311 aa9.62□□□□□ -0.87
GPNMB-209ENST00000474157 DEPDC4Q8N2C3 294 aa9.62□□□□□ -0.87
GPNMB-209ENST00000474157 PHTF2Q8N3S3 785 aa9.62□□□□□ -0.87
GPNMB-209ENST00000474157 ZCCHC11Q5TAX3 1644 aaKnown RBP9.62□□□□□ -0.87
GPNMB-209ENST00000474157 MADDQ8WXG6 1647 aa9.62□□□□□ -0.87
GPNMB-209ENST00000474157 DISP1Q96F81 1524 aa9.61□□□□□ -0.87
GPNMB-209ENST00000474157 PPM1GO15355 546 aaPredicted RBP9.61□□□□□ -0.87
GPNMB-209ENST00000474157 GIGYF1O75420 1035 aaPredicted RBP9.61□□□□□ -0.87
GPNMB-209ENST00000474157 HSP90AA1P07900 732 aaKnown RBP9.61□□□□□ -0.87
GPNMB-209ENST00000474157 WNT7BP56706 349 aa9.61□□□□□ -0.87
GPNMB-209ENST00000474157 CNGB1Q14028 1251 aaPredicted RBP9.61□□□□□ -0.87
GPNMB-209ENST00000474157 TEX2Q8IWB9 1127 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms