RNA–Protein interactions for RNA: ENST00000474088.1

PKD1-211, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 923 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-211ENST00000474088 SLC27A3Q5K4L6 730 aa34.55■■■■□ 3.12
PKD1-211ENST00000474088 SGIP1Q9BQI5 828 aa34.55■■■■□ 3.12
PKD1-211ENST00000474088 USHBP1Q8N6Y0 703 aa34.53■■■■□ 3.12
PKD1-211ENST00000474088 CARD14Q9BXL6 1004 aa34.53■■■■□ 3.12
PKD1-211ENST00000474088 HSP90AB2PQ58FF8 381 aa34.52■■■■□ 3.12
PKD1-211ENST00000474088 SMG6Q86US8 1419 aaKnown RBP34.52■■■■□ 3.12
PKD1-211ENST00000474088 AKT1S1Q96B36 256 aa34.51■■■■□ 3.12
PKD1-211ENST00000474088 CGNL1Q0VF96 1302 aa34.51■■■■□ 3.11
PKD1-211ENST00000474088 INSRP06213 1382 aa34.5■■■■□ 3.11
PKD1-211ENST00000474088 SHANK3Q9BYB0 1731 aa34.5■■■■□ 3.11
PKD1-211ENST00000474088 RAPGEF4Q8WZA2 1011 aa34.5■■■■□ 3.11
PKD1-211ENST00000474088 FHDC1Q9C0D6 1143 aaPredicted RBP34.5■■■■□ 3.11
PKD1-211ENST00000474088 KIF20BQ96Q89 1820 aa34.49■■■■□ 3.11
PKD1-211ENST00000474088 SYT17Q9BSW7 474 aa34.49■■■■□ 3.11
PKD1-211ENST00000474088 DOT1LQ8TEK3 1739 aa34.48■■■■□ 3.11
PKD1-211ENST00000474088 NSD2O96028 1365 aa34.48■■■■□ 3.11
PKD1-211ENST00000474088 FLT4P35916 1363 aa34.48■■■■□ 3.11
PKD1-211ENST00000474088 KIF24Q5T7B8 1368 aa34.48■■■■□ 3.11
PKD1-211ENST00000474088 TATP17735 454 aaPredicted RBP34.46■■■■□ 3.11
PKD1-211ENST00000474088 KCNQ4P56696 695 aa34.46■■■■□ 3.11
PKD1-211ENST00000474088 CLSPNQ9HAW4 1339 aa34.46■■■■□ 3.11
PKD1-211ENST00000474088 ARXQ96QS3 562 aa34.45■■■■□ 3.11
PKD1-211ENST00000474088 NSD3Q9BZ95 1437 aa34.45■■■■□ 3.11
PKD1-211ENST00000474088 PCGF6Q9BYE7 350 aa34.44■■■■□ 3.1
PKD1-211ENST00000474088 SLC16A10Q8TF71 515 aa34.43■■■■□ 3.1
PKD1-211ENST00000474088 TFCP2L1Q9NZI6 479 aa34.41■■■■□ 3.1
PKD1-211ENST00000474088 EMILIN1Q9Y6C2 1016 aa34.41■■■■□ 3.1
PKD1-211ENST00000474088 PNPLA7Q6ZV29 1317 aa34.4■■■■□ 3.1
PKD1-211ENST00000474088 LY75O60449 1722 aa34.39■■■■□ 3.1
PKD1-211ENST00000474088 CCNL1Q9UK58 526 aaPredicted RBP34.39■■■■□ 3.1
PKD1-211ENST00000474088 QSER1Q2KHR3 1735 aa34.38■■■■□ 3.09
PKD1-211ENST00000474088 PCDH11XQ9BZA7 1347 aa34.37■■■■□ 3.09
PKD1-211ENST00000474088 PCDH11YQ9BZA8 1340 aa34.37■■■■□ 3.09
PKD1-211ENST00000474088 PPM1GO15355 546 aaPredicted RBP34.34■■■■□ 3.09
PKD1-211ENST00000474088 MAP3K5Q99683 1374 aa34.34■■■■□ 3.09
PKD1-211ENST00000474088 CYP27B1O15528 508 aa34.32■■■■□ 3.08
PKD1-211ENST00000474088 WASHC2AQ641Q2 1341 aa34.31■■■■□ 3.08
PKD1-211ENST00000474088 POLD1P28340 1107 aa34.31■■■■□ 3.08
PKD1-211ENST00000474088 POLR3GLQ9BT43 218 aa34.3■■■■□ 3.08
PKD1-211ENST00000474088 TUBGCP6Q96RT7 1819 aa34.28■■■■□ 3.08
PKD1-211ENST00000474088 MPRIPQ6WCQ1 1025 aa34.27■■■■□ 3.08
PKD1-211ENST00000474088 NCAPD2Q15021 1401 aa34.27■■■■□ 3.08
PKD1-211ENST00000474088 POLKQ9UBT6 870 aa34.26■■■■□ 3.08
PKD1-211ENST00000474088 COL24A1Q17RW2 1714 aa34.26■■■■□ 3.07
PKD1-211ENST00000474088 ANKRD26Q9UPS8 1709 aa34.24■■■■□ 3.07
PKD1-211ENST00000474088 COL23A1Q86Y22 540 aaPredicted RBP34.24■■■■□ 3.07
PKD1-211ENST00000474088 EYA1Q99502 592 aa34.24■■■■□ 3.07
PKD1-211ENST00000474088 HMGB2P26583 209 aaKnown RBP34.23■■■■□ 3.07
PKD1-211ENST00000474088 KLHL34Q8N239 644 aa34.23■■■■□ 3.07
PKD1-211ENST00000474088 SPG7Q9UQ90 795 aa34.23■■■■□ 3.07
PKD1-211ENST00000474088 PALLDQ8WX93 1383 aa34.23■■■■□ 3.07
PKD1-211ENST00000474088 MSH5O43196 834 aa34.22■■■■□ 3.07
PKD1-211ENST00000474088 EIF4G2P78344 907 aaKnown RBP eCLIP34.22■■■■□ 3.07
PKD1-211ENST00000474088 NKX1-1Q15270 411 aaPredicted RBP34.22■■■■□ 3.07
PKD1-211ENST00000474088 MAP2P11137 1827 aaKnown RBP34.22■■■■□ 3.07
PKD1-211ENST00000474088 PKD1L3Q7Z443 1732 aa34.21■■■■□ 3.07
PKD1-211ENST00000474088 HSPA5P11021 654 aaKnown RBP34.19■■■■□ 3.06
PKD1-211ENST00000474088 SMARCC1Q92922 1105 aaPredicted RBP34.19■■■■□ 3.06
PKD1-211ENST00000474088 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP34.18■■■■□ 3.06
PKD1-211ENST00000474088 TOGARAM1Q9Y4F4 1720 aa34.18■■■■□ 3.06
PKD1-211ENST00000474088 TNNT2P45379 298 aaPredicted RBP34.17■■■■□ 3.06
PKD1-211ENST00000474088 GPR162Q16538 588 aa34.17■■■■□ 3.06
PKD1-211ENST00000474088 PIGBQ92521 554 aa34.17■■■■□ 3.06
PKD1-211ENST00000474088 C5P01031 1676 aa34.16■■■■□ 3.06
PKD1-211ENST00000474088 ITGB4P16144 1822 aa34.15■■■■□ 3.06
PKD1-211ENST00000474088 EIF4A2Q14240 407 aaKnown RBP34.14■■■■□ 3.06
PKD1-211ENST00000474088 ZNF784Q8NCA9 323 aaPredicted RBP34.14■■■■□ 3.06
PKD1-211ENST00000474088 PANK3Q9H999 370 aa34.14■■■■□ 3.06
PKD1-211ENST00000474088 FLAD1Q8NFF5 587 aa34.13■■■■□ 3.05
PKD1-211ENST00000474088 IFNL2Q8IZJ0 200 aa34.11■■■■□ 3.05
PKD1-211ENST00000474088 NLGN2Q8NFZ4 835 aa34.11■■■■□ 3.05
PKD1-211ENST00000474088 TAF1LQ8IZX4 1826 aa34.11■■■■□ 3.05
PKD1-211ENST00000474088 MSL1Q68DK7 614 aa34.1■■■■□ 3.05
PKD1-211ENST00000474088 CCER1Q8TC90 406 aaPredicted RBP34.1■■■■□ 3.05
PKD1-211ENST00000474088 PHKG2P15735 406 aa34.09■■■■□ 3.05
PKD1-211ENST00000474088 TMOD3Q9NYL9 352 aa34.08■■■■□ 3.05
PKD1-211ENST00000474088 CHD4Q14839 1912 aa34.08■■■■□ 3.05
PKD1-211ENST00000474088 PELP1Q8IZL8 1130 aaKnown RBP34.07■■■■□ 3.04
PKD1-211ENST00000474088 AK7Q96M32 723 aa34.07■■■■□ 3.04
PKD1-211ENST00000474088 C4BP0C0L5 1744 aa34.06■■■■□ 3.04
PKD1-211ENST00000474088 LOC102724428A0A0B4J2F2 783 aa34.04■■■■□ 3.04
PKD1-211ENST00000474088 SIK1P57059 783 aa34.04■■■■□ 3.04
PKD1-211ENST00000474088 IGSF1Q8N6C5 1336 aa34.04■■■■□ 3.04
PKD1-211ENST00000474088 ASAP1Q9ULH1 1129 aa34.03■■■■□ 3.04
PKD1-211ENST00000474088 PLEKHG2Q9H7P9 1386 aa34.02■■■■□ 3.04
PKD1-211ENST00000474088 AMIGO3Q86WK7 504 aa34.02■■■■□ 3.04
PKD1-211ENST00000474088 LINC00116Q8NCU8 138 aa33.99■■■■□ 3.03
PKD1-211ENST00000474088 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP33.98■■■■□ 3.03
PKD1-211ENST00000474088 PHF14O94880 888 aa33.98■■■■□ 3.03
PKD1-211ENST00000474088 SMIM5Q71RC9 77 aa33.98■■■■□ 3.03
PKD1-211ENST00000474088 MORC1Q86VD1 984 aa33.98■■■■□ 3.03
PKD1-211ENST00000474088 ATG3Q9NT62 314 aa33.98■■■■□ 3.03
PKD1-211ENST00000474088 UTRNP46939 3433 aa33.97■■■■□ 3.03
PKD1-211ENST00000474088 CD2APQ9Y5K6 639 aa33.97■■■■□ 3.03
PKD1-211ENST00000474088 SSFA2P28290 1259 aa33.96■■■■□ 3.03
PKD1-211ENST00000474088 ATP6V1AP38606 617 aa33.96■■■■□ 3.03
PKD1-211ENST00000474088 ITPK1Q13572 414 aa33.96■■■■□ 3.03
PKD1-211ENST00000474088 YBX3P16989 372 aaKnown RBP eCLIP33.95■■■■□ 3.03
PKD1-211ENST00000474088 PLEKHO1Q53GL0 409 aaPredicted RBP33.95■■■■□ 3.03
PKD1-211ENST00000474088 UBR3Q6ZT12 1888 aa33.95■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms