RNA–Protein interactions for RNA: ENST00000473949.5

ARF1-206, Transcript of ADP ribosylation factor 1, humanhuman

TSL 5

Gene ARF1, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF1-206ENST00000473949 MYOM1P52179 1685 aa28.83■■■□□ 2.21
ARF1-206ENST00000473949 RAPGEF4Q8WZA2 1011 aa28.82■■■□□ 2.2
ARF1-206ENST00000473949 LRRC4BQ9NT99 713 aa28.82■■■□□ 2.2
ARF1-206ENST00000473949 DOT1LQ8TEK3 1739 aa28.81■■■□□ 2.2
ARF1-206ENST00000473949 NSD3Q9BZ95 1437 aa28.81■■■□□ 2.2
ARF1-206ENST00000473949 CLSPNQ9HAW4 1339 aa28.8■■■□□ 2.2
ARF1-206ENST00000473949 YY1P25490 414 aa28.8■■■□□ 2.2
ARF1-206ENST00000473949 ZNF827Q17R98 1081 aa28.8■■■□□ 2.2
ARF1-206ENST00000473949 HSP90AB2PQ58FF8 381 aa28.8■■■□□ 2.2
ARF1-206ENST00000473949 SLC27A3Q5K4L6 730 aa28.8■■■□□ 2.2
ARF1-206ENST00000473949 CARD14Q9BXL6 1004 aa28.8■■■□□ 2.2
ARF1-206ENST00000473949 FLT4P35916 1363 aa28.79■■■□□ 2.2
ARF1-206ENST00000473949 SHANK3Q9BYB0 1731 aa28.79■■■□□ 2.2
ARF1-206ENST00000473949 INSRP06213 1382 aa28.78■■■□□ 2.2
ARF1-206ENST00000473949 CGNL1Q0VF96 1302 aa28.78■■■□□ 2.2
ARF1-206ENST00000473949 TATP17735 454 aaPredicted RBP28.78■■■□□ 2.2
ARF1-206ENST00000473949 POLR3GLQ9BT43 218 aa28.77■■■□□ 2.2
ARF1-206ENST00000473949 KIF24Q5T7B8 1368 aa28.75■■■□□ 2.19
ARF1-206ENST00000473949 PPM1GO15355 546 aaPredicted RBP28.74■■■□□ 2.19
ARF1-206ENST00000473949 KCNQ4P56696 695 aa28.74■■■□□ 2.19
ARF1-206ENST00000473949 FHDC1Q9C0D6 1143 aaPredicted RBP28.74■■■□□ 2.19
ARF1-206ENST00000473949 EMILIN1Q9Y6C2 1016 aa28.74■■■□□ 2.19
ARF1-206ENST00000473949 AKT1S1Q96B36 256 aa28.73■■■□□ 2.19
ARF1-206ENST00000473949 NSD2O96028 1365 aa28.73■■■□□ 2.19
ARF1-206ENST00000473949 SGIP1Q9BQI5 828 aa28.72■■■□□ 2.19
ARF1-206ENST00000473949 ARXQ96QS3 562 aa28.71■■■□□ 2.19
ARF1-206ENST00000473949 SYT17Q9BSW7 474 aa28.71■■■□□ 2.19
ARF1-206ENST00000473949 TFCP2L1Q9NZI6 479 aa28.71■■■□□ 2.19
ARF1-206ENST00000473949 PCDH11XQ9BZA7 1347 aa28.7■■■□□ 2.19
ARF1-206ENST00000473949 PCDH11YQ9BZA8 1340 aa28.7■■■□□ 2.19
ARF1-206ENST00000473949 CCNL1Q9UK58 526 aaPredicted RBP28.69■■■□□ 2.18
ARF1-206ENST00000473949 LY75O60449 1722 aa28.68■■■□□ 2.18
ARF1-206ENST00000473949 SLC16A10Q8TF71 515 aa28.66■■■□□ 2.18
ARF1-206ENST00000473949 PNPLA7Q6ZV29 1317 aa28.66■■■□□ 2.18
ARF1-206ENST00000473949 QSER1Q2KHR3 1735 aa28.65■■■□□ 2.18
ARF1-206ENST00000473949 POLD1P28340 1107 aa28.63■■■□□ 2.17
ARF1-206ENST00000473949 EIF4G2P78344 907 aaKnown RBP eCLIP28.63■■■□□ 2.176e-6■□□□□ 8.5
ARF1-206ENST00000473949 KLHL34Q8N239 644 aa28.62■■■□□ 2.17
ARF1-206ENST00000473949 TUBGCP6Q96RT7 1819 aa28.62■■■□□ 2.17
ARF1-206ENST00000473949 CYP27B1O15528 508 aa28.61■■■□□ 2.17
ARF1-206ENST00000473949 MSH5O43196 834 aa28.61■■■□□ 2.17
ARF1-206ENST00000473949 MPRIPQ6WCQ1 1025 aa28.61■■■□□ 2.17
ARF1-206ENST00000473949 CCER1Q8TC90 406 aaPredicted RBP28.61■■■□□ 2.17
ARF1-206ENST00000473949 MAP2P11137 1827 aaKnown RBP28.6■■■□□ 2.17
ARF1-206ENST00000473949 TNNT2P45379 298 aaPredicted RBP28.6■■■□□ 2.17
ARF1-206ENST00000473949 WASHC2AQ641Q2 1341 aa28.6■■■□□ 2.17
ARF1-206ENST00000473949 HSPA5P11021 654 aaKnown RBP28.59■■■□□ 2.17
ARF1-206ENST00000473949 ANKRD26Q9UPS8 1709 aa28.59■■■□□ 2.17
ARF1-206ENST00000473949 POLKQ9UBT6 870 aa28.58■■■□□ 2.17
ARF1-206ENST00000473949 SPG7Q9UQ90 795 aa28.58■■■□□ 2.17
ARF1-206ENST00000473949 EYA1Q99502 592 aa28.57■■■□□ 2.16
ARF1-206ENST00000473949 PALLDQ8WX93 1383 aa28.57■■■□□ 2.16
ARF1-206ENST00000473949 PKD1L3Q7Z443 1732 aa28.56■■■□□ 2.16
ARF1-206ENST00000473949 MAP3K5Q99683 1374 aa28.56■■■□□ 2.16
ARF1-206ENST00000473949 NCAPD2Q15021 1401 aa28.55■■■□□ 2.16
ARF1-206ENST00000473949 TOGARAM1Q9Y4F4 1720 aa28.53■■■□□ 2.16
ARF1-206ENST00000473949 HMGB2P26583 209 aaKnown RBP28.53■■■□□ 2.16
ARF1-206ENST00000473949 COL23A1Q86Y22 540 aaPredicted RBP28.53■■■□□ 2.16
ARF1-206ENST00000473949 C5P01031 1676 aa28.53■■■□□ 2.16
ARF1-206ENST00000473949 SMARCC1Q92922 1105 aaPredicted RBP28.52■■■□□ 2.16
ARF1-206ENST00000473949 PANK3Q9H999 370 aa28.52■■■□□ 2.16
ARF1-206ENST00000473949 ITGB4P16144 1822 aa28.51■■■□□ 2.15
ARF1-206ENST00000473949 EIF4A2Q14240 407 aaKnown RBP28.5■■■□□ 2.15
ARF1-206ENST00000473949 GPR162Q16538 588 aa28.5■■■□□ 2.15
ARF1-206ENST00000473949 COL24A1Q17RW2 1714 aa28.49■■■□□ 2.15
ARF1-206ENST00000473949 NKX1-1Q15270 411 aaPredicted RBP28.49■■■□□ 2.15
ARF1-206ENST00000473949 PIGBQ92521 554 aa28.49■■■□□ 2.15
ARF1-206ENST00000473949 MSL1Q68DK7 614 aa28.48■■■□□ 2.15
ARF1-206ENST00000473949 PELP1Q8IZL8 1130 aaKnown RBP28.48■■■□□ 2.15
ARF1-206ENST00000473949 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.48■■■□□ 2.15
ARF1-206ENST00000473949 IFNL2Q8IZJ0 200 aa28.46■■■□□ 2.15
ARF1-206ENST00000473949 AK7Q96M32 723 aa28.46■■■□□ 2.15
ARF1-206ENST00000473949 TMOD3Q9NYL9 352 aa28.46■■■□□ 2.15
ARF1-206ENST00000473949 TAF1LQ8IZX4 1826 aa28.46■■■□□ 2.15
ARF1-206ENST00000473949 FLAD1Q8NFF5 587 aa28.45■■■□□ 2.14
ARF1-206ENST00000473949 UTRNP46939 3433 aa28.45■■■□□ 2.14
ARF1-206ENST00000473949 PHKG2P15735 406 aa28.44■■■□□ 2.14
ARF1-206ENST00000473949 NLGN2Q8NFZ4 835 aa28.43■■■□□ 2.14
ARF1-206ENST00000473949 CHD4Q14839 1912 aa28.42■■■□□ 2.14
ARF1-206ENST00000473949 C4BP0C0L5 1744 aa28.42■■■□□ 2.14
ARF1-206ENST00000473949 MORC1Q86VD1 984 aa28.41■■■□□ 2.14
ARF1-206ENST00000473949 ZNF784Q8NCA9 323 aaPredicted RBP28.41■■■□□ 2.14
ARF1-206ENST00000473949 LOC102724428A0A0B4J2F2 783 aa28.4■■■□□ 2.14
ARF1-206ENST00000473949 PHF14O94880 888 aa28.4■■■□□ 2.14
ARF1-206ENST00000473949 SIK1P57059 783 aa28.4■■■□□ 2.14
ARF1-206ENST00000473949 IGSF1Q8N6C5 1336 aa28.4■■■□□ 2.14
ARF1-206ENST00000473949 ASAP1Q9ULH1 1129 aa28.39■■■□□ 2.14
ARF1-206ENST00000473949 KNSTRNQ9Y448 316 aa28.38■■■□□ 2.13
ARF1-206ENST00000473949 ATP6V1AP38606 617 aa28.35■■■□□ 2.13
ARF1-206ENST00000473949 SMIM5Q71RC9 77 aa28.35■■■□□ 2.13
ARF1-206ENST00000473949 LINC00116Q8NCU8 138 aa28.35■■■□□ 2.13
ARF1-206ENST00000473949 PLEKHG2Q9H7P9 1386 aa28.35■■■□□ 2.13
ARF1-206ENST00000473949 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.34■■■□□ 2.13
ARF1-206ENST00000473949 PLEKHO1Q53GL0 409 aaPredicted RBP28.34■■■□□ 2.13
ARF1-206ENST00000473949 AMIGO3Q86WK7 504 aa28.34■■■□□ 2.13
ARF1-206ENST00000473949 HSP90AB1P08238 724 aaKnown RBP28.33■■■□□ 2.13
ARF1-206ENST00000473949 UBR3Q6ZT12 1888 aa28.32■■■□□ 2.12
ARF1-206ENST00000473949 ATG3Q9NT62 314 aa28.32■■■□□ 2.12
ARF1-206ENST00000473949 SSFA2P28290 1259 aa28.31■■■□□ 2.12
ARF1-206ENST00000473949 ITPK1Q13572 414 aa28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms