RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 MYBBP1AQ9BQG0 1328 aaKnown RBP16.66■□□□□ 0.26
DDX56-209ENST00000473924 UPF1Q92900 1129 aaKnown RBP eCLIP16.65■□□□□ 0.26
DDX56-209ENST00000473924 COL3A1P02461 1466 aaPredicted RBP16.65■□□□□ 0.26
DDX56-209ENST00000473924 AEBP1Q8IUX7 1158 aa16.64■□□□□ 0.25
DDX56-209ENST00000473924 RGPD1P0DJD0 1748 aa16.64■□□□□ 0.25
DDX56-209ENST00000473924 ANP32CO43423 234 aa16.63■□□□□ 0.25
DDX56-209ENST00000473924 HMOX1P09601 288 aa16.63■□□□□ 0.25
DDX56-209ENST00000473924 SF3B2Q13435 895 aaKnown RBP16.63■□□□□ 0.25
DDX56-209ENST00000473924 SPG7Q9UQ90 795 aa16.63■□□□□ 0.25
DDX56-209ENST00000473924 CCDC125Q86Z20 511 aa16.62■□□□□ 0.25
DDX56-209ENST00000473924 PCDH11XQ9BZA7 1347 aa16.62■□□□□ 0.25
DDX56-209ENST00000473924 PCDH11YQ9BZA8 1340 aa16.62■□□□□ 0.25
DDX56-209ENST00000473924 TRIM37O94972 964 aa16.61■□□□□ 0.25
DDX56-209ENST00000473924 KDRP35968 1356 aa16.61■□□□□ 0.25
DDX56-209ENST00000473924 U2AF1L5P0DN76 240 aaPredicted RBP16.6■□□□□ 0.25
DDX56-209ENST00000473924 U2AF1Q01081 240 aaKnown RBP eCLIP16.6■□□□□ 0.25
DDX56-209ENST00000473924 PLEKHO1Q53GL0 409 aaPredicted RBP16.6■□□□□ 0.25
DDX56-209ENST00000473924 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.6■□□□□ 0.25
DDX56-209ENST00000473924 AMOTQ4VCS5 1084 aa16.59■□□□□ 0.25
DDX56-209ENST00000473924 PLEKHG2Q9H7P9 1386 aa16.59■□□□□ 0.25
DDX56-209ENST00000473924 PKD1L3Q7Z443 1732 aa16.59■□□□□ 0.25
DDX56-209ENST00000473924 SHANK3Q9BYB0 1731 aa16.59■□□□□ 0.25
DDX56-209ENST00000473924 ACSBG1Q96GR2 724 aa16.58■□□□□ 0.24
DDX56-209ENST00000473924 EP400Q96L91 3159 aa16.58■□□□□ 0.24
DDX56-209ENST00000473924 BCL9O00512 1426 aa16.57■□□□□ 0.24
DDX56-209ENST00000473924 CYP27B1O15528 508 aa16.57■□□□□ 0.24
DDX56-209ENST00000473924 ZNF530Q6P9A1 599 aaPredicted RBP16.56■□□□□ 0.24
DDX56-209ENST00000473924 IFNL2Q8IZJ0 200 aa16.56■□□□□ 0.24
DDX56-209ENST00000473924 SBF2Q86WG5 1849 aa16.55■□□□□ 0.24
DDX56-209ENST00000473924 APBA3O96018 575 aa16.55■□□□□ 0.24
DDX56-209ENST00000473924 BAG6P46379 1132 aa16.55■□□□□ 0.24
DDX56-209ENST00000473924 C1orf141Q5JVX7 400 aa16.55■□□□□ 0.24
DDX56-209ENST00000473924 SYTL4Q96C24 671 aaPredicted RBP16.55■□□□□ 0.24
DDX56-209ENST00000473924 BCL11BQ9C0K0 894 aaPredicted RBP16.55■□□□□ 0.24
DDX56-209ENST00000473924 KAT6BQ8WYB5 2073 aa16.54■□□□□ 0.24
DDX56-209ENST00000473924 FCHSD2O94868 740 aa16.54■□□□□ 0.24
DDX56-209ENST00000473924 PHKG2P15735 406 aa16.54■□□□□ 0.24
DDX56-209ENST00000473924 PRKAR2BP31323 418 aa16.54■□□□□ 0.24
DDX56-209ENST00000473924 KCNQ2O43526 872 aa16.53■□□□□ 0.24
DDX56-209ENST00000473924 NEFMP07197 916 aa16.53■□□□□ 0.24
DDX56-209ENST00000473924 WDR43Q15061 677 aaKnown RBP eCLIP16.53■□□□□ 0.24
DDX56-209ENST00000473924 RSPH6AQ9H0K4 717 aa16.53■□□□□ 0.24
DDX56-209ENST00000473924 TNS1Q9HBL0 1735 aaKnown RBP16.53■□□□□ 0.24
DDX56-209ENST00000473924 HSP90AB1P08238 724 aaKnown RBP16.52■□□□□ 0.24
DDX56-209ENST00000473924 PRIM1P49642 420 aaKnown RBP16.52■□□□□ 0.24
DDX56-209ENST00000473924 DEFB132Q7Z7B7 95 aa16.52■□□□□ 0.24
DDX56-209ENST00000473924 DOT1LQ8TEK3 1739 aa16.52■□□□□ 0.24
DDX56-209ENST00000473924 NHSQ6T4R5 1651 aa16.52■□□□□ 0.23
DDX56-209ENST00000473924 NKX1-1Q15270 411 aaPredicted RBP16.51■□□□□ 0.23
DDX56-209ENST00000473924 MTHFSDQ2M296 383 aaKnown RBP16.51■□□□□ 0.23
DDX56-209ENST00000473924 PTF1AQ7RTS3 328 aa16.51■□□□□ 0.23
DDX56-209ENST00000473924 PNNQ9H307 717 aaKnown RBP16.51■□□□□ 0.23
DDX56-209ENST00000473924 EN1Q05925 392 aaPredicted RBP16.5■□□□□ 0.23
DDX56-209ENST00000473924 AKAP4Q5JQC9 854 aa16.5■□□□□ 0.23
DDX56-209ENST00000473924 GAS2L2Q8NHY3 880 aa16.49■□□□□ 0.23
DDX56-209ENST00000473924 DCAF5Q96JK2 942 aa16.49■□□□□ 0.23
DDX56-209ENST00000473924 PHACTR3Q96KR7 559 aa16.49■□□□□ 0.23
DDX56-209ENST00000473924 MPRIPQ6WCQ1 1025 aa16.48■□□□□ 0.23
DDX56-209ENST00000473924 MAPK8IP3Q9UPT6 1336 aa16.47■□□□□ 0.23
DDX56-209ENST00000473924 MRS2Q9HD23 443 aa16.47■□□□□ 0.23
DDX56-209ENST00000473924 TOGARAM1Q9Y4F4 1720 aa16.46■□□□□ 0.23
DDX56-209ENST00000473924 PLSCR1O15162 318 aa16.46■□□□□ 0.23
DDX56-209ENST00000473924 EZH2Q15910 746 aaKnown RBP16.46■□□□□ 0.23
DDX56-209ENST00000473924 CCDC184Q52MB2 194 aa16.46■□□□□ 0.23
DDX56-209ENST00000473924 TMOD3Q9NYL9 352 aa16.46■□□□□ 0.23
DDX56-209ENST00000473924 BTAF1O14981 1849 aa16.46■□□□□ 0.23
DDX56-209ENST00000473924 GNAT3A8MTJ3 354 aa16.45■□□□□ 0.22
DDX56-209ENST00000473924 ERVV-2B6SEH9 535 aa16.45■□□□□ 0.22
DDX56-209ENST00000473924 CABP4P57796 275 aa16.45■□□□□ 0.22
DDX56-209ENST00000473924 DIEXFQ68CQ4 756 aaKnown RBP16.45■□□□□ 0.22
DDX56-209ENST00000473924 CAMKK2Q96RR4 588 aa16.45■□□□□ 0.22
DDX56-209ENST00000473924 ADAMTS8Q9UP79 889 aa16.45■□□□□ 0.22
DDX56-209ENST00000473924 MAP3K5Q99683 1374 aa16.45■□□□□ 0.22
DDX56-209ENST00000473924 KDM6AO15550 1401 aaPredicted RBP16.45■□□□□ 0.22
DDX56-209ENST00000473924 PLEKHF1Q96S99 279 aa16.44■□□□□ 0.22
DDX56-209ENST00000473924 ITGB4P16144 1822 aa16.44■□□□□ 0.22
DDX56-209ENST00000473924 PIGBQ92521 554 aa16.43■□□□□ 0.22
DDX56-209ENST00000473924 RTF1Q92541 710 aaKnown RBP16.43■□□□□ 0.22
DDX56-209ENST00000473924 LGR6Q9HBX8 967 aa16.43■□□□□ 0.22
DDX56-209ENST00000473924 RNMTO43148 476 aaKnown RBP16.42■□□□□ 0.22
DDX56-209ENST00000473924 CCDC146Q8IYE0 955 aa16.42■□□□□ 0.22
DDX56-209ENST00000473924 RGPD3A6NKT7 1758 aaPredicted RBP16.41■□□□□ 0.22
DDX56-209ENST00000473924 RGPD4Q7Z3J3 1758 aa16.41■□□□□ 0.22
DDX56-209ENST00000473924 SCN11AQ9UI33 1791 aa16.41■□□□□ 0.22
DDX56-209ENST00000473924 TXNRD1Q16881 649 aa16.41■□□□□ 0.22
DDX56-209ENST00000473924 NFATC2IPQ8NCF5 419 aa16.41■□□□□ 0.22
DDX56-209ENST00000473924 SMARCC1Q92922 1105 aaPredicted RBP16.41■□□□□ 0.22
DDX56-209ENST00000473924 RUNDC1Q96C34 613 aa16.41■□□□□ 0.22
DDX56-209ENST00000473924 NFE2L2Q16236 605 aa16.4■□□□□ 0.22
DDX56-209ENST00000473924 TEFQ10587 303 aa16.39■□□□□ 0.21
DDX56-209ENST00000473924 PNISRQ8TF01 805 aaKnown RBP16.39■□□□□ 0.21
DDX56-209ENST00000473924 SLC52A2Q9HAB3 445 aa16.39■□□□□ 0.21
DDX56-209ENST00000473924 VIRMAQ69YN4 1812 aaKnown RBP16.39■□□□□ 0.21
DDX56-209ENST00000473924 PALLDQ8WX93 1383 aa16.38■□□□□ 0.21
DDX56-209ENST00000473924 HTATSF1O43719 755 aaKnown RBP16.38■□□□□ 0.21
DDX56-209ENST00000473924 PROM2Q8N271 834 aa16.38■□□□□ 0.21
DDX56-209ENST00000473924 IL17REQ8NFR9 667 aa16.38■□□□□ 0.21
DDX56-209ENST00000473924 ASAP1Q9ULH1 1129 aa16.38■□□□□ 0.21
DDX56-209ENST00000473924 RREB1Q92766 1687 aa16.37■□□□□ 0.21
DDX56-209ENST00000473924 RIPK4P57078 832 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 235 ms