RNA–Protein interactions for RNA: ENST00000473572.2

AC002116.1-201, humanhuman

TSL 2 BASIC

Gene AC002116.1, Length 1,130 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC002116.1-201ENST00000473572 YBX3P16989 372 aaKnown RBP eCLIP23.66■■□□□ 1.38
AC002116.1-201ENST00000473572 TMC1Q8TDI8 760 aa23.66■■□□□ 1.38
AC002116.1-201ENST00000473572 IP6K1Q92551 441 aa23.66■■□□□ 1.38
AC002116.1-201ENST00000473572 NSD2O96028 1365 aa23.65■■□□□ 1.38
AC002116.1-201ENST00000473572 LTV1Q96GA3 475 aaPredicted RBP23.64■■□□□ 1.37
AC002116.1-201ENST00000473572 SIN3AQ96ST3 1273 aa23.63■■□□□ 1.37
AC002116.1-201ENST00000473572 SLC12A5Q9H2X9 1139 aa23.63■■□□□ 1.37
AC002116.1-201ENST00000473572 CCNL1Q9UK58 526 aaPredicted RBP23.62■■□□□ 1.37
AC002116.1-201ENST00000473572 MSH5O43196 834 aa23.61■■□□□ 1.37
AC002116.1-201ENST00000473572 TERF2IPQ9NYB0 399 aa23.61■■□□□ 1.37
AC002116.1-201ENST00000473572 A0A1W2PP64 1363 aa23.61■■□□□ 1.37
AC002116.1-201ENST00000473572 C5P01031 1676 aa23.6■■□□□ 1.37
AC002116.1-201ENST00000473572 ATP10DQ9P241 1426 aa23.6■■□□□ 1.37
AC002116.1-201ENST00000473572 COL23A1Q86Y22 540 aaPredicted RBP23.6■■□□□ 1.37
AC002116.1-201ENST00000473572 NEUROD1Q13562 356 aa23.58■■□□□ 1.37
AC002116.1-201ENST00000473572 ZCRB1Q8TBF4 217 aaKnown RBP23.58■■□□□ 1.37
AC002116.1-201ENST00000473572 MEGF6O75095 1541 aa23.58■■□□□ 1.36
AC002116.1-201ENST00000473572 TAF1LQ8IZX4 1826 aa23.57■■□□□ 1.36
AC002116.1-201ENST00000473572 USP47Q96K76 1375 aa23.57■■□□□ 1.36
AC002116.1-201ENST00000473572 MSL1Q68DK7 614 aa23.56■■□□□ 1.36
AC002116.1-201ENST00000473572 HOXC9P31274 260 aa23.55■■□□□ 1.36
AC002116.1-201ENST00000473572 MAP3K19Q56UN5 1328 aa23.55■■□□□ 1.36
AC002116.1-201ENST00000473572 CARD11Q9BXL7 1154 aa23.54■■□□□ 1.36
AC002116.1-201ENST00000473572 GPBP1L1Q9HC44 474 aaPredicted RBP23.54■■□□□ 1.36
AC002116.1-201ENST00000473572 CD2APQ9Y5K6 639 aa23.54■■□□□ 1.36
AC002116.1-201ENST00000473572 AMPHP49418 695 aa23.53■■□□□ 1.36
AC002116.1-201ENST00000473572 COG3Q96JB2 828 aa23.52■■□□□ 1.36
AC002116.1-201ENST00000473572 PUS7Q96PZ0 661 aaKnown RBP23.51■■□□□ 1.35
AC002116.1-201ENST00000473572 ADCY9O60503 1353 aa23.51■■□□□ 1.35
AC002116.1-201ENST00000473572 CGNL1Q0VF96 1302 aa23.49■■□□□ 1.35
AC002116.1-201ENST00000473572 HSPA6P17066 643 aa23.48■■□□□ 1.35
AC002116.1-201ENST00000473572 FBLN1P23142 703 aa23.48■■□□□ 1.35
AC002116.1-201ENST00000473572 HMGB2P26583 209 aaKnown RBP23.48■■□□□ 1.35
AC002116.1-201ENST00000473572 FLAD1Q8NFF5 587 aa23.48■■□□□ 1.35
AC002116.1-201ENST00000473572 RTL1A6NKG5 1358 aa23.48■■□□□ 1.35
AC002116.1-201ENST00000473572 C4BP0C0L5 1744 aa23.47■■□□□ 1.35
AC002116.1-201ENST00000473572 ITGB4P16144 1822 aa23.46■■□□□ 1.35
AC002116.1-201ENST00000473572 NBPF6Q5VWK0 638 aa23.46■■□□□ 1.35
AC002116.1-201ENST00000473572 ZNF526Q8TF50 670 aaPredicted RBP23.46■■□□□ 1.35
AC002116.1-201ENST00000473572 NBPF4Q96M43 638 aa23.46■■□□□ 1.35
AC002116.1-201ENST00000473572 UBR3Q6ZT12 1888 aa23.45■■□□□ 1.35
AC002116.1-201ENST00000473572 TOGARAM1Q9Y4F4 1720 aa23.45■■□□□ 1.34
AC002116.1-201ENST00000473572 RAPGEF4Q8WZA2 1011 aa23.45■■□□□ 1.34
AC002116.1-201ENST00000473572 PALLDQ8WX93 1383 aa23.44■■□□□ 1.34
AC002116.1-201ENST00000473572 USHBP1Q8N6Y0 703 aa23.44■■□□□ 1.34
AC002116.1-201ENST00000473572 SMG6Q86US8 1419 aaKnown RBP23.43■■□□□ 1.34
AC002116.1-201ENST00000473572 PCDH11XQ9BZA7 1347 aa23.41■■□□□ 1.34
AC002116.1-201ENST00000473572 PCDH11YQ9BZA8 1340 aa23.41■■□□□ 1.34
AC002116.1-201ENST00000473572 TATP17735 454 aaPredicted RBP23.41■■□□□ 1.34
AC002116.1-201ENST00000473572 RRS1Q15050 365 aaKnown RBP23.41■■□□□ 1.34
AC002116.1-201ENST00000473572 IGSF1Q8N6C5 1336 aa23.4■■□□□ 1.34
AC002116.1-201ENST00000473572 MPRIPQ6WCQ1 1025 aa23.4■■□□□ 1.34
AC002116.1-201ENST00000473572 AK7Q96M32 723 aa23.39■■□□□ 1.33
AC002116.1-201ENST00000473572 NSD3Q9BZ95 1437 aa23.37■■□□□ 1.33
AC002116.1-201ENST00000473572 AMIGO3Q86WK7 504 aa23.37■■□□□ 1.33
AC002116.1-201ENST00000473572 SMARCC1Q92922 1105 aaPredicted RBP23.37■■□□□ 1.33
AC002116.1-201ENST00000473572 TESK2Q96S53 571 aa23.37■■□□□ 1.33
AC002116.1-201ENST00000473572 WWC3Q9ULE0 1092 aa23.37■■□□□ 1.33
AC002116.1-201ENST00000473572 PKD1L3Q7Z443 1732 aa23.36■■□□□ 1.33
AC002116.1-201ENST00000473572 MAP2P11137 1827 aaKnown RBP23.36■■□□□ 1.33
AC002116.1-201ENST00000473572 PHF14O94880 888 aa23.35■■□□□ 1.33
AC002116.1-201ENST00000473572 KIF20BQ96Q89 1820 aa23.35■■□□□ 1.33
AC002116.1-201ENST00000473572 CICQ96RK0 1608 aaPredicted RBP23.34■■□□□ 1.33
AC002116.1-201ENST00000473572 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.34■■□□□ 1.33
AC002116.1-201ENST00000473572 KIF3CO14782 793 aa23.34■■□□□ 1.33
AC002116.1-201ENST00000473572 CYP27B1O15528 508 aa23.34■■□□□ 1.33
AC002116.1-201ENST00000473572 INSRP06213 1382 aa23.34■■□□□ 1.33
AC002116.1-201ENST00000473572 FYB1O15117 783 aa23.33■■□□□ 1.33
AC002116.1-201ENST00000473572 HSP90AB2PQ58FF8 381 aa23.33■■□□□ 1.33
AC002116.1-201ENST00000473572 GGNBP2Q9H3C7 697 aa23.33■■□□□ 1.33
AC002116.1-201ENST00000473572 ST20-MTHFSA0A0A6YYL1 179 aa23.32■■□□□ 1.32
AC002116.1-201ENST00000473572 SMIM5Q71RC9 77 aa23.32■■□□□ 1.32
AC002116.1-201ENST00000473572 KIF13BQ9NQT8 1826 aa23.31■■□□□ 1.32
AC002116.1-201ENST00000473572 FLT4P35916 1363 aa23.31■■□□□ 1.32
AC002116.1-201ENST00000473572 SLC24A1O60721 1099 aa23.31■■□□□ 1.32
AC002116.1-201ENST00000473572 SSFA2P28290 1259 aa23.31■■□□□ 1.32
AC002116.1-201ENST00000473572 PIGBQ92521 554 aa23.3■■□□□ 1.32
AC002116.1-201ENST00000473572 KIF24Q5T7B8 1368 aa23.29■■□□□ 1.32
AC002116.1-201ENST00000473572 TONSLQ96HA7 1378 aa23.29■■□□□ 1.32
AC002116.1-201ENST00000473572 KIAA1551Q9HCM1 1747 aa23.28■■□□□ 1.32
AC002116.1-201ENST00000473572 N4BP2Q86UW6 1770 aaPredicted RBP23.28■■□□□ 1.32
AC002116.1-201ENST00000473572 APLP1P51693 650 aa23.27■■□□□ 1.32
AC002116.1-201ENST00000473572 LINC00116Q8NCU8 138 aa23.27■■□□□ 1.32
AC002116.1-201ENST00000473572 LOC102724428A0A0B4J2F2 783 aa23.26■■□□□ 1.31
AC002116.1-201ENST00000473572 SIK1P57059 783 aa23.26■■□□□ 1.31
AC002116.1-201ENST00000473572 NKX1-1Q15270 411 aaPredicted RBP23.26■■□□□ 1.31
AC002116.1-201ENST00000473572 PXDNLA1KZ92 1463 aa23.24■■□□□ 1.31
AC002116.1-201ENST00000473572 GNPATO15228 680 aa23.24■■□□□ 1.31
AC002116.1-201ENST00000473572 NCAPD2Q15021 1401 aa23.24■■□□□ 1.31
AC002116.1-201ENST00000473572 TOMM70O94826 608 aa23.22■■□□□ 1.31
AC002116.1-201ENST00000473572 MMP10P09238 476 aa23.22■■□□□ 1.31
AC002116.1-201ENST00000473572 SPG7Q9UQ90 795 aa23.22■■□□□ 1.31
AC002116.1-201ENST00000473572 ANKRD26Q9UPS8 1709 aa23.22■■□□□ 1.31
AC002116.1-201ENST00000473572 BRCA1P38398 1863 aaKnown RBP23.22■■□□□ 1.31
AC002116.1-201ENST00000473572 ITPK1Q13572 414 aa23.21■■□□□ 1.31
AC002116.1-201ENST00000473572 TMOD3Q9NYL9 352 aa23.21■■□□□ 1.31
AC002116.1-201ENST00000473572 WDR90Q96KV7 1748 aa23.2■■□□□ 1.3
AC002116.1-201ENST00000473572 DNAJC5GQ8N7S2 189 aa23.2■■□□□ 1.3
AC002116.1-201ENST00000473572 ASAP1Q9ULH1 1129 aa23.2■■□□□ 1.3
AC002116.1-201ENST00000473572 ATP6V1AP38606 617 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms